RNA–Protein interactions for RNA: ENST00000529565.1

CASP4-207, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 4,745 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-207ENST00000529565 MMTAG2Q9BU76 263 aaKnown RBP4.93□□□□□ -1.62
CASP4-207ENST00000529565 TMEM117Q9H0C3 514 aa4.93□□□□□ -1.62
CASP4-207ENST00000529565 PRDM5Q9NQX1 630 aaPredicted RBP4.93□□□□□ -1.62
CASP4-207ENST00000529565 PACSIN2Q9UNF0 486 aaPredicted RBP4.93□□□□□ -1.62
CASP4-207ENST00000529565 VIRMAQ69YN4 1812 aaKnown RBP4.93□□□□□ -1.62
CASP4-207ENST00000529565 C4BP0C0L5 1744 aa4.93□□□□□ -1.62
CASP4-207ENST00000529565 KRT38O76015 456 aa4.93□□□□□ -1.62
CASP4-207ENST00000529565 TFRCP02786 760 aaKnown RBP4.93□□□□□ -1.62
CASP4-207ENST00000529565 PNMA6AP0CW24 399 aaPredicted RBP4.93□□□□□ -1.62
CASP4-207ENST00000529565 SLURP2P0DP57 97 aa4.93□□□□□ -1.62
CASP4-207ENST00000529565 COMTP21964 271 aa4.93□□□□□ -1.62
CASP4-207ENST00000529565 TPI1P60174 286 aa4.93□□□□□ -1.62
CASP4-207ENST00000529565 TBX2Q13207 712 aaPredicted RBP4.93□□□□□ -1.62
CASP4-207ENST00000529565 NME3Q13232 169 aa4.93□□□□□ -1.62
CASP4-207ENST00000529565 TMED2Q15363 201 aa4.93□□□□□ -1.62
CASP4-207ENST00000529565 KIAA1755Q5JYT7 1200 aa4.93□□□□□ -1.62
CASP4-207ENST00000529565 ZNF449Q6P9G9 518 aa4.93□□□□□ -1.62
CASP4-207ENST00000529565 EP400NLQ6ZTU2 488 aa4.93□□□□□ -1.62
CASP4-207ENST00000529565 RAB44Q7Z6P3 723 aaPredicted RBP4.93□□□□□ -1.62
CASP4-207ENST00000529565 ABRAQ8N0Z2 381 aa4.93□□□□□ -1.62
CASP4-207ENST00000529565 MICALL1Q8N3F8 863 aa4.93□□□□□ -1.62
CASP4-207ENST00000529565 RYBPQ8N488 228 aaPredicted RBP4.93□□□□□ -1.62
CASP4-207ENST00000529565 IL31RAQ8NI17 732 aa4.93□□□□□ -1.62
CASP4-207ENST00000529565 UPF1Q92900 1129 aaKnown RBP eCLIP4.93□□□□□ -1.62
CASP4-207ENST00000529565 VPS39Q96JC1 886 aa4.93□□□□□ -1.62
CASP4-207ENST00000529565 VCPIP1Q96JH7 1222 aa4.93□□□□□ -1.62
CASP4-207ENST00000529565 TSPAN18Q96SJ8 248 aa4.93□□□□□ -1.62
CASP4-207ENST00000529565 GMLQ99445 158 aa4.93□□□□□ -1.62
CASP4-207ENST00000529565 BFARQ9NZS9 450 aa4.93□□□□□ -1.62
CASP4-207ENST00000529565 BCAP29Q9UHQ4 241 aa4.93□□□□□ -1.62
CASP4-207ENST00000529565 FBXL5Q9UKA1 691 aa4.93□□□□□ -1.62
CASP4-207ENST00000529565 TRPV2Q9Y5S1 764 aa4.93□□□□□ -1.62
CASP4-207ENST00000529565 PLCH1Q4KWH8 1693 aa4.93□□□□□ -1.62
CASP4-207ENST00000529565 COL1A1P02452 1464 aaPredicted RBP4.93□□□□□ -1.62
CASP4-207ENST00000529565 A0A087WUV0 522 aaPredicted RBP4.93□□□□□ -1.62
CASP4-207ENST00000529565 A0A0G2JLL6 359 aaPredicted RBP4.93□□□□□ -1.62
CASP4-207ENST00000529565 MTSS1O43312 755 aa4.93□□□□□ -1.62
CASP4-207ENST00000529565 FBXO21O94952 628 aa4.93□□□□□ -1.62
CASP4-207ENST00000529565 S100BP04271 92 aaPredicted RBP4.93□□□□□ -1.62
CASP4-207ENST00000529565 ITIH2P19823 946 aa4.93□□□□□ -1.62
CASP4-207ENST00000529565 RECQLP46063 649 aaPredicted RBP4.93□□□□□ -1.62
CASP4-207ENST00000529565 OR1G1P47890 313 aa4.93□□□□□ -1.62
CASP4-207ENST00000529565 RGS7P49802 495 aa4.93□□□□□ -1.62
CASP4-207ENST00000529565 PMS2P54278 862 aa4.93□□□□□ -1.62
CASP4-207ENST00000529565 BCAT1P54687 386 aa4.93□□□□□ -1.62
CASP4-207ENST00000529565 EIF3EP60228 445 aaKnown RBP4.93□□□□□ -1.62
CASP4-207ENST00000529565 GPS1Q13098 491 aa4.93□□□□□ -1.62
CASP4-207ENST00000529565 MAP7Q14244 749 aa4.93□□□□□ -1.62
CASP4-207ENST00000529565 SH3D19Q5HYK7 790 aa4.93□□□□□ -1.62
CASP4-207ENST00000529565 TREML2Q5T2D2 321 aa4.93□□□□□ -1.62
CASP4-207ENST00000529565 PRRT2Q7Z6L0 340 aaPredicted RBP4.93□□□□□ -1.62
CASP4-207ENST00000529565 CDR2LQ86X02 465 aaPredicted RBP4.93□□□□□ -1.62
CASP4-207ENST00000529565 C12orf56Q8IXR9 622 aa4.93□□□□□ -1.62
CASP4-207ENST00000529565 MMGT1Q8N4V1 131 aa4.93□□□□□ -1.62
CASP4-207ENST00000529565 ATP11CQ8NB49 1132 aa4.93□□□□□ -1.62
CASP4-207ENST00000529565 STKLD1Q8NE28 680 aa4.93□□□□□ -1.62
CASP4-207ENST00000529565 DEPDC1BQ8WUY9 529 aa4.93□□□□□ -1.62
CASP4-207ENST00000529565 EXOC4Q96A65 974 aa4.93□□□□□ -1.62
CASP4-207ENST00000529565 CLMNQ96JQ2 1002 aa4.93□□□□□ -1.62
CASP4-207ENST00000529565 NUDCD1Q96RS6 583 aa4.93□□□□□ -1.62
CASP4-207ENST00000529565 OSMRQ99650 979 aa4.93□□□□□ -1.62
CASP4-207ENST00000529565 LBHD1Q9BQE6 289 aaPredicted RBP4.93□□□□□ -1.62
CASP4-207ENST00000529565 IRX2Q9BZI1 471 aaPredicted RBP4.93□□□□□ -1.62
CASP4-207ENST00000529565 PPCSQ9HAB8 311 aa4.93□□□□□ -1.62
CASP4-207ENST00000529565 KIF9Q9HAQ2 790 aa4.93□□□□□ -1.62
CASP4-207ENST00000529565 HMX1Q9NP08 348 aaPredicted RBP4.93□□□□□ -1.62
CASP4-207ENST00000529565 TNFSF13BQ9Y275 285 aa4.93□□□□□ -1.62
CASP4-207ENST00000529565 DPYSL4O14531 572 aa4.92□□□□□ -1.62
CASP4-207ENST00000529565 SUN1O94901 812 aa4.92□□□□□ -1.62
CASP4-207ENST00000529565 SGPL1O95470 568 aa4.92□□□□□ -1.62
CASP4-207ENST00000529565 SLC2A3P11169 496 aa4.92□□□□□ -1.62
CASP4-207ENST00000529565 NR1D1P20393 614 aa4.92□□□□□ -1.62
CASP4-207ENST00000529565 NFIL3Q16649 462 aa4.92□□□□□ -1.62
CASP4-207ENST00000529565 DEFB115Q30KQ5 88 aa4.92□□□□□ -1.62
CASP4-207ENST00000529565 RNF219Q5W0B1 726 aaPredicted RBP4.92□□□□□ -1.62
CASP4-207ENST00000529565 KCTD16Q68DU8 428 aa4.92□□□□□ -1.62
CASP4-207ENST00000529565 RAPH1Q70E73 1250 aa4.92□□□□□ -1.62
CASP4-207ENST00000529565 TMEM161BQ8NDZ6 487 aa4.92□□□□□ -1.62
CASP4-207ENST00000529565 BCAS4Q8TDM0 211 aa4.92□□□□□ -1.62
CASP4-207ENST00000529565 C7orf43Q8WVR3 580 aa4.92□□□□□ -1.62
CASP4-207ENST00000529565 STMN2Q93045 179 aa4.92□□□□□ -1.62
CASP4-207ENST00000529565 RILPQ96NA2 401 aa4.92□□□□□ -1.62
CASP4-207ENST00000529565 OSBPL8Q9BZF1 889 aa4.92□□□□□ -1.62
CASP4-207ENST00000529565 PLSCR2Q9NRY7 297 aa4.92□□□□□ -1.62
CASP4-207ENST00000529565 FAM49BQ9NUQ9 324 aa4.92□□□□□ -1.62
CASP4-207ENST00000529565 PLAAQ9Y263 795 aa4.92□□□□□ -1.62
CASP4-207ENST00000529565 TACC3Q9Y6A5 838 aa4.92□□□□□ -1.62
CASP4-207ENST00000529565 COL18A1P39060 1754 aa4.92□□□□□ -1.62
CASP4-207ENST00000529565 F9P00740 461 aa4.92□□□□□ -1.62
CASP4-207ENST00000529565 PAEPP09466 180 aa4.92□□□□□ -1.62
CASP4-207ENST00000529565 GLRA2P23416 452 aa4.92□□□□□ -1.62
CASP4-207ENST00000529565 NCKAP1LP55160 1127 aa4.92□□□□□ -1.62
CASP4-207ENST00000529565 MYL6P60660 151 aa4.92□□□□□ -1.62
CASP4-207ENST00000529565 SP3Q02447 781 aa4.92□□□□□ -1.62
CASP4-207ENST00000529565 KRT17Q04695 432 aa4.92□□□□□ -1.62
CASP4-207ENST00000529565 DEUP1Q05D60 604 aa4.92□□□□□ -1.62
CASP4-207ENST00000529565 PTPN11Q06124 597 aaPredicted RBP4.92□□□□□ -1.62
CASP4-207ENST00000529565 P3H1Q32P28 736 aa4.92□□□□□ -1.62
CASP4-207ENST00000529565 FBXO47Q5MNV8 452 aa4.92□□□□□ -1.62
CASP4-207ENST00000529565 IZUMO3Q5VZ72 239 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms