RNA–Protein interactions for RNA: ENST00000529446.5

C9orf135-207, Transcript of chromosome 9 open reading frame 135, humanhuman

TSL 1 (best)

Gene C9orf135, Length 697 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf135-207ENST00000529446 IFNKQ9P0W0 207 aa12.6□□□□□ -0.39
C9orf135-207ENST00000529446 NXF1Q9UBU9 619 aaKnown RBP12.6□□□□□ -0.39
C9orf135-207ENST00000529446 APEX2Q9UBZ4 518 aa12.6□□□□□ -0.39
C9orf135-207ENST00000529446 FBXL5Q9UKA1 691 aa12.6□□□□□ -0.39
C9orf135-207ENST00000529446 KIAA1671Q9BY89 1806 aa12.6□□□□□ -0.39
C9orf135-207ENST00000529446 GBF1Q92538 1859 aa12.59□□□□□ -0.39
C9orf135-207ENST00000529446 F8W810 466 aa12.59□□□□□ -0.39
C9orf135-207ENST00000529446 H7C4K7 107 aa12.59□□□□□ -0.39
C9orf135-207ENST00000529446 OAZ2O95190 189 aa12.59□□□□□ -0.39
C9orf135-207ENST00000529446 URODP06132 367 aa12.59□□□□□ -0.39
C9orf135-207ENST00000529446 TRIM21P19474 475 aaKnown RBP12.59□□□□□ -0.39
C9orf135-207ENST00000529446 LHX1P48742 406 aa12.59□□□□□ -0.39
C9orf135-207ENST00000529446 DSG1Q02413 1049 aa12.59□□□□□ -0.39
C9orf135-207ENST00000529446 CUL2Q13617 745 aa12.59□□□□□ -0.39
C9orf135-207ENST00000529446 SYCP1Q15431 976 aa12.59□□□□□ -0.39
C9orf135-207ENST00000529446 KIAA1841Q6NSI8 718 aa12.59□□□□□ -0.39
C9orf135-207ENST00000529446 ANKS3Q6ZW76 656 aa12.59□□□□□ -0.39
C9orf135-207ENST00000529446 SPPL3Q8TCT6 385 aa12.59□□□□□ -0.39
C9orf135-207ENST00000529446 POF1BQ8WVV4 589 aa12.59□□□□□ -0.39
C9orf135-207ENST00000529446 ARNTL2Q8WYA1 636 aa12.59□□□□□ -0.39
C9orf135-207ENST00000529446 PIK3R5Q8WYR1 880 aa12.59□□□□□ -0.39
C9orf135-207ENST00000529446 NAP1L5Q96NT1 182 aaPredicted RBP12.59□□□□□ -0.39
C9orf135-207ENST00000529446 MMS19Q96T76 1030 aa12.59□□□□□ -0.39
C9orf135-207ENST00000529446 CRACR2AQ9BSW2 395 aa12.59□□□□□ -0.39
C9orf135-207ENST00000529446 PI4K2AQ9BTU6 479 aa12.59□□□□□ -0.39
C9orf135-207ENST00000529446 BCO2Q9BYV7 579 aa12.59□□□□□ -0.39
C9orf135-207ENST00000529446 GPR62Q9BZJ7 368 aa12.59□□□□□ -0.39
C9orf135-207ENST00000529446 ZNF576Q9H609 170 aa12.59□□□□□ -0.39
C9orf135-207ENST00000529446 APOBEC3GQ9HC16 384 aaKnown RBP12.59□□□□□ -0.39
C9orf135-207ENST00000529446 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.59□□□□□ -0.39
C9orf135-207ENST00000529446 MTUS1Q9ULD2 1270 aa12.59□□□□□ -0.39
C9orf135-207ENST00000529446 SIK3Q9Y2K2 1263 aa12.59□□□□□ -0.39
C9orf135-207ENST00000529446 GOLGA6L3A6NEY3 463 aa12.58□□□□□ -0.4
C9orf135-207ENST00000529446 CTSAP10619 480 aa12.58□□□□□ -0.4
C9orf135-207ENST00000529446 SLC9A1P19634 815 aa12.58□□□□□ -0.4
C9orf135-207ENST00000529446 WARSP23381 471 aaKnown RBP12.58□□□□□ -0.4
C9orf135-207ENST00000529446 ASPAP45381 313 aa12.58□□□□□ -0.4
C9orf135-207ENST00000529446 GLUD2P49448 558 aa12.58□□□□□ -0.4
C9orf135-207ENST00000529446 MFAP3P55082 362 aa12.58□□□□□ -0.4
C9orf135-207ENST00000529446 YWHAHQ04917 246 aaPredicted RBP12.58□□□□□ -0.4
C9orf135-207ENST00000529446 KCNMA1Q12791 1236 aa12.58□□□□□ -0.4
C9orf135-207ENST00000529446 PTPROQ16827 1216 aa12.58□□□□□ -0.4
C9orf135-207ENST00000529446 SOWAHAQ2M3V2 549 aa12.58□□□□□ -0.4
C9orf135-207ENST00000529446 VARS2Q5ST30 1063 aaKnown RBP12.58□□□□□ -0.4
C9orf135-207ENST00000529446 OVOS1Q6IE37 1185 aa12.58□□□□□ -0.4
C9orf135-207ENST00000529446 UNC93AQ86WB7 457 aa12.58□□□□□ -0.4
C9orf135-207ENST00000529446 FMNL3Q8IVF7 1028 aa12.58□□□□□ -0.4
C9orf135-207ENST00000529446 ADGRF2Q8IZF7 708 aa12.58□□□□□ -0.4
C9orf135-207ENST00000529446 VPS52Q8N1B4 723 aa12.58□□□□□ -0.4
C9orf135-207ENST00000529446 THEM5Q8N1Q8 247 aa12.58□□□□□ -0.4
C9orf135-207ENST00000529446 TMEM130Q8N3G9 435 aa12.58□□□□□ -0.4
C9orf135-207ENST00000529446 PPM1KQ8N3J5 372 aa12.58□□□□□ -0.4
C9orf135-207ENST00000529446 PDCL2Q8N4E4 241 aa12.58□□□□□ -0.4
C9orf135-207ENST00000529446 NEK11Q8NG66 645 aa12.58□□□□□ -0.4
C9orf135-207ENST00000529446 PCMTD1Q96MG8 357 aaPredicted RBP12.58□□□□□ -0.4
C9orf135-207ENST00000529446 NUP58Q9BVL2 599 aa12.58□□□□□ -0.4
C9orf135-207ENST00000529446 VN1R3Q9BXE9 311 aa12.58□□□□□ -0.4
C9orf135-207ENST00000529446 EDEM3Q9BZQ6 932 aa12.58□□□□□ -0.4
C9orf135-207ENST00000529446 XPO4Q9C0E2 1151 aaKnown RBP12.58□□□□□ -0.4
C9orf135-207ENST00000529446 ZBP1Q9H171 429 aa12.58□□□□□ -0.4
C9orf135-207ENST00000529446 TLR9Q9NR96 1032 aa12.58□□□□□ -0.4
C9orf135-207ENST00000529446 MRPL17Q9NRX2 175 aaKnown RBP12.58□□□□□ -0.4
C9orf135-207ENST00000529446 LMCD1Q9NZU5 365 aa12.58□□□□□ -0.4
C9orf135-207ENST00000529446 L1RE1Q9UN81 338 aa12.58□□□□□ -0.4
C9orf135-207ENST00000529446 BACE2Q9Y5Z0 518 aa12.58□□□□□ -0.4
C9orf135-207ENST00000529446 IRAK3Q9Y616 596 aa12.58□□□□□ -0.4
C9orf135-207ENST00000529446 NLRC5Q86WI3 1866 aa12.57□□□□□ -0.4
C9orf135-207ENST00000529446 OR6C75A6NL08 312 aa12.57□□□□□ -0.4
C9orf135-207ENST00000529446 I3L4J1 428 aa12.57□□□□□ -0.4
C9orf135-207ENST00000529446 GABRDO14764 452 aa12.57□□□□□ -0.4
C9orf135-207ENST00000529446 TEX33O43247 280 aa12.57□□□□□ -0.4
C9orf135-207ENST00000529446 LPXNO60711 386 aa12.57□□□□□ -0.4
C9orf135-207ENST00000529446 C1RP00736 705 aa12.57□□□□□ -0.4
C9orf135-207ENST00000529446 IGFBP6P24592 240 aaPredicted RBP12.57□□□□□ -0.4
C9orf135-207ENST00000529446 PCSK1P29120 753 aa12.57□□□□□ -0.4
C9orf135-207ENST00000529446 TKTP29401 623 aaKnown RBP12.57□□□□□ -0.4
C9orf135-207ENST00000529446 PBX1P40424 430 aa12.57□□□□□ -0.4
C9orf135-207ENST00000529446 INCA1Q0VD86 236 aa12.57□□□□□ -0.4
C9orf135-207ENST00000529446 MRPL58Q14197 206 aaKnown RBP12.57□□□□□ -0.4
C9orf135-207ENST00000529446 SMC1AQ14683 1233 aaKnown RBP12.57□□□□□ -0.4
C9orf135-207ENST00000529446 FIGNQ5HY92 759 aa12.57□□□□□ -0.4
C9orf135-207ENST00000529446 ZNF697Q5TEC3 545 aa12.57□□□□□ -0.4
C9orf135-207ENST00000529446 KLHDC7AQ5VTJ3 777 aa12.57□□□□□ -0.4
C9orf135-207ENST00000529446 KIAA0319Q5VV43 1072 aa12.57□□□□□ -0.4
C9orf135-207ENST00000529446 SCARA3Q6AZY7 606 aa12.57□□□□□ -0.4
C9orf135-207ENST00000529446 SPOPLQ6IQ16 392 aa12.57□□□□□ -0.4
C9orf135-207ENST00000529446 ZNF280DQ6N043 979 aa12.57□□□□□ -0.4
C9orf135-207ENST00000529446 PHLDB3Q6NSJ2 640 aa12.57□□□□□ -0.4
C9orf135-207ENST00000529446 MRFAP1L1Q96HT8 127 aa12.57□□□□□ -0.4
C9orf135-207ENST00000529446 LSM14BQ9BX40 385 aaKnown RBP12.57□□□□□ -0.4
C9orf135-207ENST00000529446 TRIM5Q9C035 493 aa12.57□□□□□ -0.4
C9orf135-207ENST00000529446 SNX25Q9H3E2 840 aa12.57□□□□□ -0.4
C9orf135-207ENST00000529446 ALG13Q9NP73 1137 aaKnown RBP12.57□□□□□ -0.4
C9orf135-207ENST00000529446 SIX2Q9NPC8 291 aa12.57□□□□□ -0.4
C9orf135-207ENST00000529446 ENTPD7Q9NQZ7 604 aa12.57□□□□□ -0.4
C9orf135-207ENST00000529446 FNIP2Q9P278 1114 aa12.57□□□□□ -0.4
C9orf135-207ENST00000529446 MTRRQ9UBK8 725 aa12.57□□□□□ -0.4
C9orf135-207ENST00000529446 POLIQ9UNA4 740 aa12.57□□□□□ -0.4
C9orf135-207ENST00000529446 ITIH6Q6UXX5 1313 aa12.57□□□□□ -0.4
C9orf135-207ENST00000529446 FSD2A1L4K1 749 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms