RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 GZMKP49863 264 aa6.08□□□□□ -1.44
CSDE1-212ENST00000529046 U2AF1Q01081 240 aaKnown RBP eCLIP6.08□□□□□ -1.44
CSDE1-212ENST00000529046 DSC2Q02487 901 aa6.08□□□□□ -1.44
CSDE1-212ENST00000529046 SP140Q13342 867 aa6.08□□□□□ -1.44
CSDE1-212ENST00000529046 NOMO1Q15155 1222 aa6.08□□□□□ -1.44
CSDE1-212ENST00000529046 METTL24Q5JXM2 366 aa6.08□□□□□ -1.44
CSDE1-212ENST00000529046 PRAMEF14Q5SWL7 426 aa6.08□□□□□ -1.44
CSDE1-212ENST00000529046 DOK3Q7L591 496 aa6.08□□□□□ -1.44
CSDE1-212ENST00000529046 ELOA2Q8IYF1 753 aaPredicted RBP6.08□□□□□ -1.44
CSDE1-212ENST00000529046 TCP11L2Q8N4U5 519 aa6.08□□□□□ -1.44
CSDE1-212ENST00000529046 MB21D1Q8N884 522 aa6.08□□□□□ -1.44
CSDE1-212ENST00000529046 DPF2Q92785 391 aa6.08□□□□□ -1.44
CSDE1-212ENST00000529046 HPS3Q969F9 1004 aa6.08□□□□□ -1.44
CSDE1-212ENST00000529046 IL17RAQ96F46 866 aa6.08□□□□□ -1.44
CSDE1-212ENST00000529046 MRGPRX4Q96LA9 322 aa6.08□□□□□ -1.44
CSDE1-212ENST00000529046 DMRTA2Q96SC8 542 aa6.08□□□□□ -1.44
CSDE1-212ENST00000529046 GTPBP4Q9BZE4 634 aaKnown RBP6.08□□□□□ -1.44
CSDE1-212ENST00000529046 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.08□□□□□ -1.44
CSDE1-212ENST00000529046 ING1Q9UK53 422 aaPredicted RBP6.08□□□□□ -1.44
CSDE1-212ENST00000529046 INTUQ9ULD6 942 aa6.08□□□□□ -1.44
CSDE1-212ENST00000529046 DNM3Q9UQ16 869 aa6.08□□□□□ -1.44
CSDE1-212ENST00000529046 BCL9O00512 1426 aa6.08□□□□□ -1.44
CSDE1-212ENST00000529046 PPIP5K1Q6PFW1 1433 aa6.08□□□□□ -1.44
CSDE1-212ENST00000529046 CAMTA1Q9Y6Y1 1673 aa6.07□□□□□ -1.44
CSDE1-212ENST00000529046 HOXA3O43365 443 aaPredicted RBP6.07□□□□□ -1.44
CSDE1-212ENST00000529046 GNAT2P19087 354 aa6.07□□□□□ -1.44
CSDE1-212ENST00000529046 ADSLP30566 484 aaPredicted RBP6.07□□□□□ -1.44
CSDE1-212ENST00000529046 FLT3LGP49771 235 aa6.07□□□□□ -1.44
CSDE1-212ENST00000529046 CDC42EP1Q00587 391 aa6.07□□□□□ -1.44
CSDE1-212ENST00000529046 FHL2Q14192 279 aa6.07□□□□□ -1.44
CSDE1-212ENST00000529046 FAM47AQ5JRC9 791 aa6.07□□□□□ -1.44
CSDE1-212ENST00000529046 MFSD14BQ5SR56 506 aa6.07□□□□□ -1.44
CSDE1-212ENST00000529046 HTR3DQ70Z44 454 aa6.07□□□□□ -1.44
CSDE1-212ENST00000529046 TPH2Q8IWU9 490 aa6.07□□□□□ -1.44
CSDE1-212ENST00000529046 KCNH5Q8NCM2 988 aa6.07□□□□□ -1.44
CSDE1-212ENST00000529046 ZNF483Q8TF39 744 aaPredicted RBP6.07□□□□□ -1.44
CSDE1-212ENST00000529046 ATXN2LQ8WWM7 1075 aaKnown RBP6.07□□□□□ -1.44
CSDE1-212ENST00000529046 TSR2Q969E8 191 aaKnown RBP6.07□□□□□ -1.44
CSDE1-212ENST00000529046 RUNDC1Q96C34 613 aa6.07□□□□□ -1.44
CSDE1-212ENST00000529046 C7orf25Q9BPX7 421 aa6.07□□□□□ -1.44
CSDE1-212ENST00000529046 MANSC1Q9H8J5 431 aa6.07□□□□□ -1.44
CSDE1-212ENST00000529046 CHPF2Q9P2E5 772 aa6.07□□□□□ -1.44
CSDE1-212ENST00000529046 PCDHB1Q9Y5F3 818 aa6.07□□□□□ -1.44
CSDE1-212ENST00000529046 LMO7Q8WWI1 1683 aa6.07□□□□□ -1.44
CSDE1-212ENST00000529046 USP6P35125 1406 aa6.07□□□□□ -1.44
CSDE1-212ENST00000529046 PHRF1Q9P1Y6 1649 aaKnown RBP6.07□□□□□ -1.44
CSDE1-212ENST00000529046 TTC21AQ8NDW8 1320 aa6.06□□□□□ -1.44
CSDE1-212ENST00000529046 SLIT3O75094 1523 aa6.06□□□□□ -1.44
CSDE1-212ENST00000529046 RGPD1P0DJD0 1748 aa6.06□□□□□ -1.44
CSDE1-212ENST00000529046 TARDBPQ13148 414 aaKnown RBP eCLIP6.06□□□□□ -1.44
CSDE1-212ENST00000529046 MTM1Q13496 603 aa6.06□□□□□ -1.44
CSDE1-212ENST00000529046 OTUD7BQ6GQQ9 843 aa6.06□□□□□ -1.44
CSDE1-212ENST00000529046 MIGA2Q7L4E1 593 aa6.06□□□□□ -1.44
CSDE1-212ENST00000529046 APBB1IPQ7Z5R6 666 aaPredicted RBP6.06□□□□□ -1.44
CSDE1-212ENST00000529046 FMNL3Q8IVF7 1028 aa6.06□□□□□ -1.44
CSDE1-212ENST00000529046 PQLC1Q8N2U9 271 aa6.06□□□□□ -1.44
CSDE1-212ENST00000529046 ZGPATQ8N5A5 531 aaKnown RBP6.06□□□□□ -1.44
CSDE1-212ENST00000529046 MDGA1Q8NFP4 955 aa6.06□□□□□ -1.44
CSDE1-212ENST00000529046 IFI44Q8TCB0 444 aa6.06□□□□□ -1.44
CSDE1-212ENST00000529046 ST8SIA2Q92186 375 aa6.06□□□□□ -1.44
CSDE1-212ENST00000529046 CEP95Q96GE4 821 aa6.06□□□□□ -1.44
CSDE1-212ENST00000529046 TAAR9Q96RI9 348 aa6.06□□□□□ -1.44
CSDE1-212ENST00000529046 EPC1Q9H2F5 836 aa6.06□□□□□ -1.44
CSDE1-212ENST00000529046 ANLNQ9NQW6 1124 aa6.06□□□□□ -1.44
CSDE1-212ENST00000529046 LANCL2Q9NS86 450 aa6.06□□□□□ -1.44
CSDE1-212ENST00000529046 CRB1P82279 1406 aa6.06□□□□□ -1.44
CSDE1-212ENST00000529046 CPSF1Q10570 1443 aaKnown RBP6.06□□□□□ -1.44
CSDE1-212ENST00000529046 NRKQ7Z2Y5 1582 aa6.06□□□□□ -1.44
CSDE1-212ENST00000529046 COL5A2P05997 1499 aaPredicted RBP6.05□□□□□ -1.44
CSDE1-212ENST00000529046 KLRG2A4D1S0 409 aaPredicted RBP6.05□□□□□ -1.44
CSDE1-212ENST00000529046 GOLGA6L6A8MZA4 724 aa6.05□□□□□ -1.44
CSDE1-212ENST00000529046 PJA2O43164 708 aa6.05□□□□□ -1.44
CSDE1-212ENST00000529046 STC2O76061 302 aa6.05□□□□□ -1.44
CSDE1-212ENST00000529046 ADH4P08319 380 aa6.05□□□□□ -1.44
CSDE1-212ENST00000529046 MAKP20794 623 aa6.05□□□□□ -1.44
CSDE1-212ENST00000529046 RABGGTBP53611 331 aa6.05□□□□□ -1.44
CSDE1-212ENST00000529046 KRTAP1-1Q07627 177 aa6.05□□□□□ -1.44
CSDE1-212ENST00000529046 IL10RAQ13651 578 aa6.05□□□□□ -1.44
CSDE1-212ENST00000529046 EZH2Q15910 746 aaKnown RBP6.05□□□□□ -1.44
CSDE1-212ENST00000529046 CSRP2Q16527 193 aa6.05□□□□□ -1.44
CSDE1-212ENST00000529046 FAM214AQ32MH5 1076 aa6.05□□□□□ -1.44
CSDE1-212ENST00000529046 UAP1L1Q3KQV9 507 aa6.05□□□□□ -1.44
CSDE1-212ENST00000529046 FNDC7Q5VTL7 733 aa6.05□□□□□ -1.44
CSDE1-212ENST00000529046 NAIF1Q69YI7 327 aaPredicted RBP6.05□□□□□ -1.44
CSDE1-212ENST00000529046 PDZD4Q76G19 769 aaPredicted RBP6.05□□□□□ -1.44
CSDE1-212ENST00000529046 ARHGEF25Q86VW2 580 aa6.05□□□□□ -1.44
CSDE1-212ENST00000529046 OR5M3Q8NGP4 307 aa6.05□□□□□ -1.44
CSDE1-212ENST00000529046 SLC35G2Q8TBE7 412 aa6.05□□□□□ -1.44
CSDE1-212ENST00000529046 PGBD4Q96DM1 585 aa6.05□□□□□ -1.44
CSDE1-212ENST00000529046 C8orf48Q96LL4 319 aa6.05□□□□□ -1.44
CSDE1-212ENST00000529046 LSM14BQ9BX40 385 aaKnown RBP6.05□□□□□ -1.44
CSDE1-212ENST00000529046 MMRN2Q9H8L6 949 aa6.05□□□□□ -1.44
CSDE1-212ENST00000529046 CALCOCO1Q9P1Z2 691 aa6.05□□□□□ -1.44
CSDE1-212ENST00000529046 REXO2Q9Y3B8 237 aaKnown RBP6.05□□□□□ -1.44
CSDE1-212ENST00000529046 ABCC6O95255 1503 aa6.04□□□□□ -1.44
CSDE1-212ENST00000529046 B5MCH6 92 aa6.04□□□□□ -1.44
CSDE1-212ENST00000529046 SLC16A6O15403 523 aa6.04□□□□□ -1.44
CSDE1-212ENST00000529046 PEX11BO96011 259 aa6.04□□□□□ -1.44
CSDE1-212ENST00000529046 IL2RBP14784 551 aa6.04□□□□□ -1.44
CSDE1-212ENST00000529046 PCSK1P29120 753 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms