RNA–Protein interactions for RNA: ENST00000528965.1

CTSB-215, Transcript of cathepsin B, humanhuman

TSL 3

Gene CTSB, Length 556 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-215ENST00000528965 TMEM132DQ14C87 1099 aa16.95■□□□□ 0.3
CTSB-215ENST00000528965 TEAD2Q15562 447 aa16.95■□□□□ 0.3
CTSB-215ENST00000528965 JADE1Q6IE81 842 aa16.95■□□□□ 0.3
CTSB-215ENST00000528965 SLFN12LQ6IEE8 588 aa16.95■□□□□ 0.3
CTSB-215ENST00000528965 ITIH5Q86UX2 942 aa16.95■□□□□ 0.3
CTSB-215ENST00000528965 MFSD6LQ8IWD5 586 aa16.95■□□□□ 0.3
CTSB-215ENST00000528965 GPR161Q8N6U8 529 aaKnown RBP16.95■□□□□ 0.3
CTSB-215ENST00000528965 SUMF1Q8NBK3 374 aa16.95■□□□□ 0.3
CTSB-215ENST00000528965 ZBTB44Q8NCP5 570 aa16.95■□□□□ 0.3
CTSB-215ENST00000528965 SHKBP1Q8TBC3 707 aa16.95■□□□□ 0.3
CTSB-215ENST00000528965 CSGALNACT1Q8TDX6 532 aa16.95■□□□□ 0.3
CTSB-215ENST00000528965 FAM3CQ92520 227 aa16.95■□□□□ 0.3
CTSB-215ENST00000528965 LARP4BQ92615 738 aaKnown RBP16.95■□□□□ 0.3
CTSB-215ENST00000528965 CHRDQ9H2X0 955 aa16.95■□□□□ 0.3
CTSB-215ENST00000528965 HSFX1Q9UBD0 423 aa16.95■□□□□ 0.3
CTSB-215ENST00000528965 DSEQ9UL01 958 aa16.95■□□□□ 0.3
CTSB-215ENST00000528965 ZNF292O60281 2723 aa16.95■□□□□ 0.3
CTSB-215ENST00000528965 A0A1W2PRU2 124 aa16.94■□□□□ 0.3
CTSB-215ENST00000528965 FAM189A1O60320 539 aa16.94■□□□□ 0.3
CTSB-215ENST00000528965 MOSPD3O75425 235 aa16.94■□□□□ 0.3
CTSB-215ENST00000528965 GJA1P17302 382 aa16.94■□□□□ 0.3
CTSB-215ENST00000528965 VIPR2P41587 438 aa16.94■□□□□ 0.3
CTSB-215ENST00000528965 GUCY2FP51841 1108 aa16.94■□□□□ 0.3
CTSB-215ENST00000528965 NRLP54845 237 aa16.94■□□□□ 0.3
CTSB-215ENST00000528965 MLLT6P55198 1093 aaPredicted RBP16.94■□□□□ 0.3
CTSB-215ENST00000528965 LILRA4P59901 499 aa16.94■□□□□ 0.3
CTSB-215ENST00000528965 DUSP4Q13115 394 aa16.94■□□□□ 0.3
CTSB-215ENST00000528965 MCM6Q14566 821 aa16.94■□□□□ 0.3
CTSB-215ENST00000528965 VEPH1Q14D04 833 aa16.94■□□□□ 0.3
CTSB-215ENST00000528965 KARSQ15046 597 aaKnown RBP16.94■□□□□ 0.3
CTSB-215ENST00000528965 ARHGAP15Q53QZ3 475 aa16.94■□□□□ 0.3
CTSB-215ENST00000528965 POTEHQ6S545 545 aa16.94■□□□□ 0.3
CTSB-215ENST00000528965 METTL23Q86XA0 190 aa16.94■□□□□ 0.3
CTSB-215ENST00000528965 KRI1Q8N9T8 703 aaKnown RBP16.94■□□□□ 0.3
CTSB-215ENST00000528965 SENP8Q96LD8 212 aa16.94■□□□□ 0.3
CTSB-215ENST00000528965 ZSWIM3Q96MP5 696 aa16.94■□□□□ 0.3
CTSB-215ENST00000528965 ASB7Q9H672 318 aa16.94■□□□□ 0.3
CTSB-215ENST00000528965 BLOC1S4Q9NUP1 217 aa16.94■□□□□ 0.3
CTSB-215ENST00000528965 CPSF3Q9UKF6 684 aaKnown RBP16.94■□□□□ 0.3
CTSB-215ENST00000528965 SMG5Q9UPR3 1016 aaKnown RBP16.94■□□□□ 0.3
CTSB-215ENST00000528965 MTMR11A4FU01 709 aa16.93■□□□□ 0.3
CTSB-215ENST00000528965 HEPACAM2A8MVW5 462 aa16.93■□□□□ 0.3
CTSB-215ENST00000528965 DPYSL4O14531 572 aa16.93■□□□□ 0.3
CTSB-215ENST00000528965 CCR3P51677 355 aa16.93■□□□□ 0.3
CTSB-215ENST00000528965 GTF2BQ00403 316 aa16.93■□□□□ 0.3
CTSB-215ENST00000528965 MTAPQ13126 283 aa16.93■□□□□ 0.3
CTSB-215ENST00000528965 LRRC32Q14392 662 aa16.93■□□□□ 0.3
CTSB-215ENST00000528965 PUM1Q14671 1186 aaKnown RBP eCLIP16.93■□□□□ 0.3
CTSB-215ENST00000528965 C9orf57Q5W0N0 161 aa16.93■□□□□ 0.3
CTSB-215ENST00000528965 CENPPQ6IPU0 288 aa16.93■□□□□ 0.3
CTSB-215ENST00000528965 DGLUCYQ7Z3D6 616 aa16.93■□□□□ 0.3
CTSB-215ENST00000528965 TMC8Q8IU68 726 aa16.93■□□□□ 0.3
CTSB-215ENST00000528965 PSMG2Q969U7 264 aa16.93■□□□□ 0.3
CTSB-215ENST00000528965 HVCN1Q96D96 273 aa16.93■□□□□ 0.3
CTSB-215ENST00000528965 RMDN1Q96DB5 314 aa16.93■□□□□ 0.3
CTSB-215ENST00000528965 GCNAQ96QF7 691 aa16.93■□□□□ 0.3
CTSB-215ENST00000528965 EPC1Q9H2F5 836 aa16.93■□□□□ 0.3
CTSB-215ENST00000528965 C2CD2Q9Y426 696 aa16.93■□□□□ 0.3
CTSB-215ENST00000528965 CACNA1AO00555 2505 aa16.93■□□□□ 0.3
CTSB-215ENST00000528965 F5P12259 2224 aa16.92■□□□□ 0.3
CTSB-215ENST00000528965 CHADO15335 359 aa16.92■□□□□ 0.3
CTSB-215ENST00000528965 LILRB5O75023 590 aa16.92■□□□□ 0.3
CTSB-215ENST00000528965 VNN2O95498 520 aa16.92■□□□□ 0.3
CTSB-215ENST00000528965 CYP11A1P05108 521 aa16.92■□□□□ 0.3
CTSB-215ENST00000528965 NFICP08651 508 aa16.92■□□□□ 0.3
CTSB-215ENST00000528965 SDHBP21912 280 aa16.92■□□□□ 0.3
CTSB-215ENST00000528965 TXLNAP40222 546 aa16.92■□□□□ 0.3
CTSB-215ENST00000528965 TUFMP49411 452 aaKnown RBP16.92■□□□□ 0.3
CTSB-215ENST00000528965 POU5F1Q01860 360 aaKnown RBP16.92■□□□□ 0.3
CTSB-215ENST00000528965 SMARCB1Q12824 385 aa16.92■□□□□ 0.3
CTSB-215ENST00000528965 SF3A1Q15459 793 aaKnown RBP16.92■□□□□ 0.3
CTSB-215ENST00000528965 ADALQ6DHV7 355 aa16.92■□□□□ 0.3
CTSB-215ENST00000528965 MAMSTRQ6ZN01 415 aa16.92■□□□□ 0.3
CTSB-215ENST00000528965 FAM200AQ8TCP9 573 aa16.92■□□□□ 0.3
CTSB-215ENST00000528965 NELL1Q92832 810 aa16.92■□□□□ 0.3
CTSB-215ENST00000528965 DNAJC25Q9H1X3 360 aa16.92■□□□□ 0.3
CTSB-215ENST00000528965 ATXN3LQ9H3M9 355 aa16.92■□□□□ 0.3
CTSB-215ENST00000528965 ST6GALNAC4Q9H4F1 302 aa16.92■□□□□ 0.3
CTSB-215ENST00000528965 C8orf33Q9H7E9 229 aaPredicted RBP16.92■□□□□ 0.3
CTSB-215ENST00000528965 STK17AQ9UEE5 414 aa16.92■□□□□ 0.3
CTSB-215ENST00000528965 CCDC39Q9UFE4 941 aa16.92■□□□□ 0.3
CTSB-215ENST00000528965 GMEB2Q9UKD1 530 aa16.92■□□□□ 0.3
CTSB-215ENST00000528965 RAB23Q9ULC3 237 aa16.92■□□□□ 0.3
CTSB-215ENST00000528965 COL4A2P08572 1712 aa16.91■□□□□ 0.3
CTSB-215ENST00000528965 GPR179Q6PRD1 2367 aa16.91■□□□□ 0.3
CTSB-215ENST00000528965 NRG2O14511 850 aaPredicted RBP16.91■□□□□ 0.3
CTSB-215ENST00000528965 PPEF2O14830 753 aa16.91■□□□□ 0.3
CTSB-215ENST00000528965 CD2BP2O95400 341 aaKnown RBP16.91■□□□□ 0.3
CTSB-215ENST00000528965 PDCP20941 246 aa16.91■□□□□ 0.3
CTSB-215ENST00000528965 CDC25CP30307 473 aa16.91■□□□□ 0.3
CTSB-215ENST00000528965 NMT1P30419 496 aaKnown RBP16.91■□□□□ 0.3
CTSB-215ENST00000528965 TAF6P49848 677 aa16.91■□□□□ 0.3
CTSB-215ENST00000528965 KPNA1P52294 538 aaPredicted RBP16.91■□□□□ 0.3
CTSB-215ENST00000528965 FCHO2Q0JRZ9 810 aa16.91■□□□□ 0.3
CTSB-215ENST00000528965 FZD5Q13467 585 aa16.91■□□□□ 0.3
CTSB-215ENST00000528965 POSTNQ15063 836 aa16.91■□□□□ 0.3
CTSB-215ENST00000528965 TAF12Q16514 161 aa16.91■□□□□ 0.3
CTSB-215ENST00000528965 SLC39A4Q6P5W5 647 aa16.91■□□□□ 0.3
CTSB-215ENST00000528965 THEM5Q8N1Q8 247 aa16.91■□□□□ 0.3
CTSB-215ENST00000528965 TMEM130Q8N3G9 435 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms