RNA–Protein interactions for RNA: ENST00000528395.1

TMX2-CTNND1-201, Transcript of TMX2-CTNND1 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMX2-CTNND1, Length 585 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1-201ENST00000528395 APOL5Q9BWW9 433 aa12.12□□□□□ -0.47
TMX2-CTNND1-201ENST00000528395 MTMR12Q9C0I1 747 aa12.12□□□□□ -0.47
TMX2-CTNND1-201ENST00000528395 GDAP2Q9NXN4 497 aa12.12□□□□□ -0.47
TMX2-CTNND1-201ENST00000528395 AGAP1Q9UPQ3 857 aa12.12□□□□□ -0.47
TMX2-CTNND1-201ENST00000528395 MAPK8IP1Q9UQF2 711 aa12.12□□□□□ -0.47
TMX2-CTNND1-201ENST00000528395 FRMD4BQ9Y2L6 1034 aa12.12□□□□□ -0.47
TMX2-CTNND1-201ENST00000528395 PLXNA3P51805 1871 aa12.11□□□□□ -0.47
TMX2-CTNND1-201ENST00000528395 TULP1O00294 542 aaPredicted RBP12.11□□□□□ -0.47
TMX2-CTNND1-201ENST00000528395 CYB561D2O14569 222 aa12.11□□□□□ -0.47
TMX2-CTNND1-201ENST00000528395 IKBKBO14920 756 aa12.11□□□□□ -0.47
TMX2-CTNND1-201ENST00000528395 KRT19P08727 400 aa12.11□□□□□ -0.47
TMX2-CTNND1-201ENST00000528395 SPATA31D3P0C874 917 aa12.11□□□□□ -0.47
TMX2-CTNND1-201ENST00000528395 PRCPP42785 496 aa12.11□□□□□ -0.47
TMX2-CTNND1-201ENST00000528395 MYO1EQ12965 1108 aa12.11□□□□□ -0.47
TMX2-CTNND1-201ENST00000528395 ADAM9Q13443 819 aa12.11□□□□□ -0.47
TMX2-CTNND1-201ENST00000528395 CENPPQ6IPU0 288 aa12.11□□□□□ -0.47
TMX2-CTNND1-201ENST00000528395 SPATA31D4Q6ZUB0 917 aa12.11□□□□□ -0.47
TMX2-CTNND1-201ENST00000528395 DPH6Q7L8W6 267 aa12.11□□□□□ -0.47
TMX2-CTNND1-201ENST00000528395 TRAPPC11Q7Z392 1133 aa12.11□□□□□ -0.47
TMX2-CTNND1-201ENST00000528395 TCEAL8Q8IYN2 117 aa12.11□□□□□ -0.47
TMX2-CTNND1-201ENST00000528395 TMC2Q8TDI7 906 aa12.11□□□□□ -0.47
TMX2-CTNND1-201ENST00000528395 PARD3BQ8TEW8 1205 aa12.11□□□□□ -0.47
TMX2-CTNND1-201ENST00000528395 CCDC127Q96BQ5 260 aa12.11□□□□□ -0.47
TMX2-CTNND1-201ENST00000528395 NECAB3Q96P71 396 aaPredicted RBP12.11□□□□□ -0.47
TMX2-CTNND1-201ENST00000528395 PRKD2Q9BZL6 878 aa12.11□□□□□ -0.47
TMX2-CTNND1-201ENST00000528395 AFF4Q9UHB7 1163 aaKnown RBP12.11□□□□□ -0.47
TMX2-CTNND1-201ENST00000528395 SIX4Q9UIU6 781 aa12.11□□□□□ -0.47
TMX2-CTNND1-201ENST00000528395 USTQ9Y2C2 406 aa12.11□□□□□ -0.47
TMX2-CTNND1-201ENST00000528395 TIMM13Q9Y5L4 95 aaPredicted RBP12.11□□□□□ -0.47
TMX2-CTNND1-201ENST00000528395 PTPRJQ12913 1337 aa12.11□□□□□ -0.47
TMX2-CTNND1-201ENST00000528395 WDR27A2RRH5 827 aa12.1□□□□□ -0.47
TMX2-CTNND1-201ENST00000528395 LOC730098B7Z3J9 87 aa12.1□□□□□ -0.47
TMX2-CTNND1-201ENST00000528395 HUS1O60921 280 aa12.1□□□□□ -0.47
TMX2-CTNND1-201ENST00000528395 RFPL2O75678 378 aa12.1□□□□□ -0.47
TMX2-CTNND1-201ENST00000528395 STAU1O95793 577 aaKnown RBP12.1□□□□□ -0.47
TMX2-CTNND1-201ENST00000528395 C8AP07357 584 aa12.1□□□□□ -0.47
TMX2-CTNND1-201ENST00000528395 FAM163BP0C2L3 166 aa12.1□□□□□ -0.47
TMX2-CTNND1-201ENST00000528395 NR2F2P24468 414 aa12.1□□□□□ -0.47
TMX2-CTNND1-201ENST00000528395 ELF1P32519 619 aa12.1□□□□□ -0.47
TMX2-CTNND1-201ENST00000528395 PSMC2P35998 433 aaKnown RBP12.1□□□□□ -0.47
TMX2-CTNND1-201ENST00000528395 CASP4P49662 377 aa12.1□□□□□ -0.47
TMX2-CTNND1-201ENST00000528395 MCCD1P59942 119 aaPredicted RBP12.1□□□□□ -0.47
TMX2-CTNND1-201ENST00000528395 GPR17Q13304 367 aa12.1□□□□□ -0.47
TMX2-CTNND1-201ENST00000528395 STIM1Q13586 685 aa12.1□□□□□ -0.47
TMX2-CTNND1-201ENST00000528395 PPM1LQ5SGD2 360 aa12.1□□□□□ -0.47
TMX2-CTNND1-201ENST00000528395 CEP135Q66GS9 1140 aa12.1□□□□□ -0.47
TMX2-CTNND1-201ENST00000528395 LMBRD2Q68DH5 695 aaPredicted RBP12.1□□□□□ -0.47
TMX2-CTNND1-201ENST00000528395 FOXR2Q6PJQ5 311 aa12.1□□□□□ -0.47
TMX2-CTNND1-201ENST00000528395 INTS8Q75QN2 995 aaKnown RBP12.1□□□□□ -0.47
TMX2-CTNND1-201ENST00000528395 SMYD4Q8IYR2 804 aaPredicted RBP12.1□□□□□ -0.47
TMX2-CTNND1-201ENST00000528395 ADSSL1Q8N142 457 aa12.1□□□□□ -0.47
TMX2-CTNND1-201ENST00000528395 THEM5Q8N1Q8 247 aa12.1□□□□□ -0.47
TMX2-CTNND1-201ENST00000528395 TMEM86AQ8N2M4 240 aa12.1□□□□□ -0.47
TMX2-CTNND1-201ENST00000528395 TOP6BLQ8N6T0 577 aa12.1□□□□□ -0.47
TMX2-CTNND1-201ENST00000528395 SMG7Q92540 1137 aaKnown RBP12.1□□□□□ -0.47
TMX2-CTNND1-201ENST00000528395 ZNF707Q96C28 371 aaPredicted RBP12.1□□□□□ -0.47
TMX2-CTNND1-201ENST00000528395 HPDLQ96IR7 371 aa12.1□□□□□ -0.47
TMX2-CTNND1-201ENST00000528395 GBP4Q96PP9 640 aa12.1□□□□□ -0.47
TMX2-CTNND1-201ENST00000528395 MKNK1Q9BUB5 465 aa12.1□□□□□ -0.47
TMX2-CTNND1-201ENST00000528395 GZF1Q9H116 711 aaPredicted RBP12.1□□□□□ -0.47
TMX2-CTNND1-201ENST00000528395 POMKQ9H5K3 350 aa12.1□□□□□ -0.47
TMX2-CTNND1-201ENST00000528395 WDR6Q9NNW5 1121 aaKnown RBP12.1□□□□□ -0.47
TMX2-CTNND1-201ENST00000528395 TSHZ2Q9NRE2 1034 aa12.1□□□□□ -0.47
TMX2-CTNND1-201ENST00000528395 HSFX1Q9UBD0 423 aa12.1□□□□□ -0.47
TMX2-CTNND1-201ENST00000528395 NR2E1Q9Y466 385 aa12.1□□□□□ -0.47
TMX2-CTNND1-201ENST00000528395 PSMA7O14818 248 aa12.09□□□□□ -0.47
TMX2-CTNND1-201ENST00000528395 CETN3O15182 167 aa12.09□□□□□ -0.47
TMX2-CTNND1-201ENST00000528395 XYLBO75191 536 aa12.09□□□□□ -0.47
TMX2-CTNND1-201ENST00000528395 CPB1P15086 417 aa12.09□□□□□ -0.47
TMX2-CTNND1-201ENST00000528395 ATICP31939 592 aa12.09□□□□□ -0.47
TMX2-CTNND1-201ENST00000528395 SSTR3P32745 418 aaPredicted RBP12.09□□□□□ -0.47
TMX2-CTNND1-201ENST00000528395 ARPP19P56211 112 aa12.09□□□□□ -0.47
TMX2-CTNND1-201ENST00000528395 FKBP3Q00688 224 aaKnown RBP12.09□□□□□ -0.47
TMX2-CTNND1-201ENST00000528395 LRRC63Q05C16 580 aa12.09□□□□□ -0.47
TMX2-CTNND1-201ENST00000528395 SMARCB1Q12824 385 aa12.09□□□□□ -0.47
TMX2-CTNND1-201ENST00000528395 WSCD1Q658N2 575 aa12.09□□□□□ -0.47
TMX2-CTNND1-201ENST00000528395 PLCD3Q8N3E9 789 aa12.09□□□□□ -0.47
TMX2-CTNND1-201ENST00000528395 TRIML1Q8N9V2 468 aa12.09□□□□□ -0.47
TMX2-CTNND1-201ENST00000528395 SLC7A14Q8TBB6 771 aa12.09□□□□□ -0.47
TMX2-CTNND1-201ENST00000528395 ZNF516Q92618 1163 aa12.09□□□□□ -0.47
TMX2-CTNND1-201ENST00000528395 ERCC4Q92889 916 aaPredicted RBP12.09□□□□□ -0.47
TMX2-CTNND1-201ENST00000528395 DHTKD1Q96HY7 919 aaPredicted RBP12.09□□□□□ -0.47
TMX2-CTNND1-201ENST00000528395 TSG101Q99816 390 aa12.09□□□□□ -0.47
TMX2-CTNND1-201ENST00000528395 PIDD1Q9HB75 910 aa12.09□□□□□ -0.47
TMX2-CTNND1-201ENST00000528395 CD320Q9NPF0 282 aa12.09□□□□□ -0.47
TMX2-CTNND1-201ENST00000528395 MAN1B1Q9UKM7 699 aa12.09□□□□□ -0.47
TMX2-CTNND1-201ENST00000528395 SNX9Q9Y5X1 595 aa12.09□□□□□ -0.47
TMX2-CTNND1-201ENST00000528395 LRRIQ3A6PVS8 624 aaPredicted RBP12.08□□□□□ -0.48
TMX2-CTNND1-201ENST00000528395 PRRG1O14668 218 aa12.08□□□□□ -0.48
TMX2-CTNND1-201ENST00000528395 AKAP3O75969 853 aa12.08□□□□□ -0.48
TMX2-CTNND1-201ENST00000528395 CST3P01034 146 aaPredicted RBP12.08□□□□□ -0.48
TMX2-CTNND1-201ENST00000528395 C4BPAP04003 597 aaKnown RBP12.08□□□□□ -0.48
TMX2-CTNND1-201ENST00000528395 WEE2P0C1S8 567 aa12.08□□□□□ -0.48
TMX2-CTNND1-201ENST00000528395 KRT13P13646 458 aa12.08□□□□□ -0.48
TMX2-CTNND1-201ENST00000528395 LHX1P48742 406 aa12.08□□□□□ -0.48
TMX2-CTNND1-201ENST00000528395 VAMP7P51809 220 aa12.08□□□□□ -0.48
TMX2-CTNND1-201ENST00000528395 ADCY1Q08828 1119 aa12.08□□□□□ -0.48
TMX2-CTNND1-201ENST00000528395 BFSP1Q12934 665 aa12.08□□□□□ -0.48
TMX2-CTNND1-201ENST00000528395 TRPC3Q13507 836 aa12.08□□□□□ -0.48
TMX2-CTNND1-201ENST00000528395 MORC3Q14149 939 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms