RNA–Protein interactions for RNA: ENST00000528339.5

SORL1-207, Transcript of sortilin related receptor 1, humanhuman

TSL 2

Gene SORL1, Length 3,703 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORL1-207ENST00000528339 OTUD1Q5VV17 481 aaPredicted RBP8.42□□□□□ -1.06
SORL1-207ENST00000528339 LCLAT1Q6UWP7 414 aa8.42□□□□□ -1.06
SORL1-207ENST00000528339 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.42□□□□□ -1.066e-7■■■□□ 18.6
SORL1-207ENST00000528339 CATSPER4Q7RTX7 472 aa8.42□□□□□ -1.06
SORL1-207ENST00000528339 TMTC1Q8IUR5 882 aa8.42□□□□□ -1.06
SORL1-207ENST00000528339 FMNL3Q8IVF7 1028 aa8.42□□□□□ -1.06
SORL1-207ENST00000528339 TTC39CQ8N584 583 aa8.42□□□□□ -1.06
SORL1-207ENST00000528339 NIPA2Q8N8Q9 360 aa8.42□□□□□ -1.06
SORL1-207ENST00000528339 VCPIP1Q96JH7 1222 aa8.42□□□□□ -1.06
SORL1-207ENST00000528339 CALR3Q96L12 384 aaKnown RBP8.42□□□□□ -1.06
SORL1-207ENST00000528339 ADAM2Q99965 735 aa8.42□□□□□ -1.06
SORL1-207ENST00000528339 BEGAINQ9BUH8 593 aa8.42□□□□□ -1.06
SORL1-207ENST00000528339 OXCT2Q9BYC2 517 aaPredicted RBP8.42□□□□□ -1.06
SORL1-207ENST00000528339 RXFP1Q9HBX9 757 aa8.42□□□□□ -1.06
SORL1-207ENST00000528339 L1RE1Q9UN81 338 aa8.42□□□□□ -1.06
SORL1-207ENST00000528339 ERLIN2O94905 339 aa8.42□□□□□ -1.06
SORL1-207ENST00000528339 CYP11B1P15538 503 aa8.42□□□□□ -1.06
SORL1-207ENST00000528339 DEKP35659 375 aaKnown RBP8.42□□□□□ -1.06
SORL1-207ENST00000528339 MTIF2P46199 727 aaKnown RBP8.42□□□□□ -1.06
SORL1-207ENST00000528339 MTF1Q14872 753 aa8.42□□□□□ -1.06
SORL1-207ENST00000528339 CLEC16AQ2KHT3 1053 aa8.42□□□□□ -1.06
SORL1-207ENST00000528339 SNX30Q5VWJ9 437 aa8.42□□□□□ -1.06
SORL1-207ENST00000528339 SYCP3Q8IZU3 236 aa8.42□□□□□ -1.06
SORL1-207ENST00000528339 CCAR2Q8N163 923 aaKnown RBP8.42□□□□□ -1.06
SORL1-207ENST00000528339 DBF4BQ8NFT6 615 aa8.42□□□□□ -1.06
SORL1-207ENST00000528339 UBE2Q2Q8WVN8 375 aa8.42□□□□□ -1.06
SORL1-207ENST00000528339 KCTD13Q8WZ19 329 aa8.42□□□□□ -1.06
SORL1-207ENST00000528339 SLC4A5Q9BY07 1137 aa8.42□□□□□ -1.06
SORL1-207ENST00000528339 TRIM5Q9C035 493 aa8.42□□□□□ -1.06
SORL1-207ENST00000528339 NRDE2Q9H7Z3 1164 aa8.42□□□□□ -1.06
SORL1-207ENST00000528339 RSAD1Q9HA92 442 aa8.42□□□□□ -1.06
SORL1-207ENST00000528339 PNPLA8Q9NP80 782 aa8.42□□□□□ -1.06
SORL1-207ENST00000528339 AVENQ9NQS1 362 aaPredicted RBP8.42□□□□□ -1.06
SORL1-207ENST00000528339 ENDOD1O94919 500 aa8.41□□□□□ -1.06
SORL1-207ENST00000528339 SERPINC1P01008 464 aa8.41□□□□□ -1.06
SORL1-207ENST00000528339 ITGB1P05556 798 aa8.41□□□□□ -1.06
SORL1-207ENST00000528339 PLCB3Q01970 1234 aa8.41□□□□□ -1.06
SORL1-207ENST00000528339 GOLGA8FQ08AF8 430 aa8.41□□□□□ -1.06
SORL1-207ENST00000528339 GOLGA8DPQ0D2H9 430 aa8.41□□□□□ -1.06
SORL1-207ENST00000528339 ZNF252P-AS1Q0IIN9 211 aa8.41□□□□□ -1.06
SORL1-207ENST00000528339 SPOPLQ6IQ16 392 aa8.41□□□□□ -1.06
SORL1-207ENST00000528339 TMEM86AQ8N2M4 240 aa8.41□□□□□ -1.06
SORL1-207ENST00000528339 PDCL2Q8N4E4 241 aa8.41□□□□□ -1.06
SORL1-207ENST00000528339 ZNF397Q8NF99 534 aaPredicted RBP8.41□□□□□ -1.06
SORL1-207ENST00000528339 SLC35F5Q8WV83 523 aa8.41□□□□□ -1.06
SORL1-207ENST00000528339 ZFP42Q96MM3 310 aa8.41□□□□□ -1.06
SORL1-207ENST00000528339 NHEJ1Q9H9Q4 299 aaPredicted RBP8.41□□□□□ -1.06
SORL1-207ENST00000528339 SLC38A7Q9NVC3 462 aa8.41□□□□□ -1.06
SORL1-207ENST00000528339 ANKFY1Q9P2R3 1169 aa8.41□□□□□ -1.06
SORL1-207ENST00000528339 NAGPAQ9UK23 515 aa8.41□□□□□ -1.06
SORL1-207ENST00000528339 LZTS1Q9Y250 596 aa8.41□□□□□ -1.06
SORL1-207ENST00000528339 USP3Q9Y6I4 520 aa8.41□□□□□ -1.06
SORL1-207ENST00000528339 SOWAHDA6NJG2 315 aa8.41□□□□□ -1.06
SORL1-207ENST00000528339 USP27XA6NNY8 438 aa8.41□□□□□ -1.06
SORL1-207ENST00000528339 O00370 1275 aa8.41□□□□□ -1.06
SORL1-207ENST00000528339 FERP16591 822 aa8.41□□□□□ -1.06
SORL1-207ENST00000528339 GPD2P43304 727 aa8.41□□□□□ -1.06
SORL1-207ENST00000528339 ADKP55263 362 aaKnown RBP8.41□□□□□ -1.06
SORL1-207ENST00000528339 CCDC40Q4G0X9 1142 aa8.41□□□□□ -1.06
SORL1-207ENST00000528339 PLEKHA7Q6IQ23 1121 aa8.41□□□□□ -1.06
SORL1-207ENST00000528339 CYP26C1Q6V0L0 522 aa8.41□□□□□ -1.06
SORL1-207ENST00000528339 ZBTB33Q86T24 672 aa8.41□□□□□ -1.06
SORL1-207ENST00000528339 CDR2LQ86X02 465 aaPredicted RBP8.41□□□□□ -1.06
SORL1-207ENST00000528339 ZNF280BQ86YH2 543 aa8.41□□□□□ -1.06
SORL1-207ENST00000528339 CENPIQ92674 756 aaPredicted RBP8.41□□□□□ -1.06
SORL1-207ENST00000528339 SMYD3Q9H7B4 428 aa8.41□□□□□ -1.06
SORL1-207ENST00000528339 MAGEC2Q9UBF1 373 aaPredicted RBP8.41□□□□□ -1.06
SORL1-207ENST00000528339 NEU3Q9UQ49 428 aa8.41□□□□□ -1.06
SORL1-207ENST00000528339 CARNS1A5YM72 827 aa8.41□□□□□ -1.06
SORL1-207ENST00000528339 NDUFA10O95299 355 aa8.41□□□□□ -1.06
SORL1-207ENST00000528339 POU3F3P20264 500 aaPredicted RBP8.41□□□□□ -1.06
SORL1-207ENST00000528339 AKAP5P24588 427 aa8.41□□□□□ -1.06
SORL1-207ENST00000528339 MLH1P40692 756 aa8.41□□□□□ -1.06
SORL1-207ENST00000528339 PLA2G4AP47712 749 aa8.41□□□□□ -1.06
SORL1-207ENST00000528339 ARSEP51690 589 aa8.41□□□□□ -1.06
SORL1-207ENST00000528339 RBP5P82980 135 aa8.41□□□□□ -1.06
SORL1-207ENST00000528339 DCLRE1AQ6PJP8 1040 aa8.41□□□□□ -1.06
SORL1-207ENST00000528339 USP37Q86T82 979 aa8.41□□□□□ -1.06
SORL1-207ENST00000528339 SLC39A11Q8N1S5 342 aa8.41□□□□□ -1.06
SORL1-207ENST00000528339 PGBD4Q96DM1 585 aa8.41□□□□□ -1.06
SORL1-207ENST00000528339 DDX27Q96GQ7 796 aaKnown RBP8.41□□□□□ -1.06
SORL1-207ENST00000528339 CCDC94Q9BW85 323 aaPredicted RBP8.41□□□□□ -1.06
SORL1-207ENST00000528339 ZNF518BQ9C0D4 1074 aa8.41□□□□□ -1.06
SORL1-207ENST00000528339 KIAA1257Q9ULG3 409 aa8.41□□□□□ -1.06
SORL1-207ENST00000528339 BARX2Q9UMQ3 279 aaPredicted RBP8.41□□□□□ -1.06
SORL1-207ENST00000528339 POLIQ9UNA4 740 aa8.41□□□□□ -1.06
SORL1-207ENST00000528339 A0A087X0T9 212 aa8.4□□□□□ -1.06
SORL1-207ENST00000528339 ABLIM3O94929 683 aa8.4□□□□□ -1.06
SORL1-207ENST00000528339 ITGB3P05106 788 aa8.4□□□□□ -1.06
SORL1-207ENST00000528339 WEE2P0C1S8 567 aa8.4□□□□□ -1.06
SORL1-207ENST00000528339 FAM228BP0C875 321 aa8.4□□□□□ -1.06
SORL1-207ENST00000528339 CYP2C18P33260 490 aa8.4□□□□□ -1.06
SORL1-207ENST00000528339 CLCNKBP51801 687 aa8.4□□□□□ -1.06
SORL1-207ENST00000528339 CAMK1Q14012 370 aa8.4□□□□□ -1.06
SORL1-207ENST00000528339 FILIP1LQ4L180 1135 aa8.4□□□□□ -1.06
SORL1-207ENST00000528339 HSP90AA4PQ58FG1 418 aa8.4□□□□□ -1.06
SORL1-207ENST00000528339 SLC8B1Q6J4K2 584 aa8.4□□□□□ -1.06
SORL1-207ENST00000528339 TMEM110Q86TL2 294 aa8.4□□□□□ -1.06
SORL1-207ENST00000528339 SLC47A2Q86VL8 602 aa8.4□□□□□ -1.06
SORL1-207ENST00000528339 MCRS1Q96EZ8 462 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms