RNA–Protein interactions for RNA: ENST00000528165.5

CAPN1-214, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 2,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-214ENST00000528165 ALCAMQ13740 583 aa15.48■□□□□ 0.07
CAPN1-214ENST00000528165 C12orf56Q8IXR9 622 aa15.48■□□□□ 0.07
CAPN1-214ENST00000528165 HELQQ8TDG4 1101 aa15.48■□□□□ 0.07
CAPN1-214ENST00000528165 DHX38Q92620 1227 aaKnown RBP15.48■□□□□ 0.07
CAPN1-214ENST00000528165 DTNBP1Q96EV8 351 aa15.48■□□□□ 0.07
CAPN1-214ENST00000528165 FHDC1Q9C0D6 1143 aaPredicted RBP15.48■□□□□ 0.07
CAPN1-214ENST00000528165 KRT82Q9NSB4 513 aa15.48■□□□□ 0.07
CAPN1-214ENST00000528165 TAS2R1Q9NYW7 299 aa15.48■□□□□ 0.07
CAPN1-214ENST00000528165 ZNF148Q9UQR1 794 aa15.48■□□□□ 0.07
CAPN1-214ENST00000528165 GOLGA8IPA6NC78 632 aa15.47■□□□□ 0.07
CAPN1-214ENST00000528165 GOLGA8JA6NMD2 632 aa15.47■□□□□ 0.07
CAPN1-214ENST00000528165 PROSCO94903 275 aa15.47■□□□□ 0.07
CAPN1-214ENST00000528165 CD58P19256 250 aa15.47■□□□□ 0.07
CAPN1-214ENST00000528165 ARSEP51690 589 aa15.47■□□□□ 0.07
CAPN1-214ENST00000528165 GEMIN4P57678 1058 aaKnown RBP15.47■□□□□ 0.07
CAPN1-214ENST00000528165 GTF2IP78347 998 aa15.47■□□□□ 0.07
CAPN1-214ENST00000528165 GPS1Q13098 491 aa15.47■□□□□ 0.07
CAPN1-214ENST00000528165 RASA2Q15283 850 aa15.47■□□□□ 0.07
CAPN1-214ENST00000528165 CERKLQ49MI3 558 aaPredicted RBP15.47■□□□□ 0.07
CAPN1-214ENST00000528165 LRRC23Q53EV4 343 aaPredicted RBP15.47■□□□□ 0.07
CAPN1-214ENST00000528165 CENPUQ71F23 418 aa15.47■□□□□ 0.07
CAPN1-214ENST00000528165 CCDC127Q96BQ5 260 aa15.47■□□□□ 0.07
CAPN1-214ENST00000528165 TRIM11Q96F44 468 aa15.47■□□□□ 0.07
CAPN1-214ENST00000528165 RBM41Q96IZ5 413 aaKnown RBP15.47■□□□□ 0.07
CAPN1-214ENST00000528165 LXNQ9BS40 222 aa15.47■□□□□ 0.07
CAPN1-214ENST00000528165 FBXO6Q9NRD1 293 aaPredicted RBP15.47■□□□□ 0.07
CAPN1-214ENST00000528165 MTO1Q9Y2Z2 717 aaKnown RBP15.47■□□□□ 0.07
CAPN1-214ENST00000528165 ZSCAN5DPP0CG00 497 aa15.47■□□□□ 0.07
CAPN1-214ENST00000528165 PGM1P36871 562 aa15.47■□□□□ 0.07
CAPN1-214ENST00000528165 KRT39Q6A163 491 aa15.47■□□□□ 0.07
CAPN1-214ENST00000528165 KBTBD2Q8IY47 623 aa15.47■□□□□ 0.07
CAPN1-214ENST00000528165 GLIS1Q8NBF1 620 aa15.47■□□□□ 0.07
CAPN1-214ENST00000528165 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.47■□□□□ 0.07
CAPN1-214ENST00000528165 MKL1Q969V6 931 aa15.47■□□□□ 0.07
CAPN1-214ENST00000528165 TSSK1BQ9BXA7 367 aa15.47■□□□□ 0.07
CAPN1-214ENST00000528165 WASF2Q9Y6W5 498 aa15.47■□□□□ 0.07
CAPN1-214ENST00000528165 COL24A1Q17RW2 1714 aa15.47■□□□□ 0.07
CAPN1-214ENST00000528165 ALOX15BO15296 676 aa15.46■□□□□ 0.07
CAPN1-214ENST00000528165 DNAJC6O75061 913 aa15.46■□□□□ 0.07
CAPN1-214ENST00000528165 ZBED4O75132 1171 aa15.46■□□□□ 0.07
CAPN1-214ENST00000528165 LYNP07948 512 aa15.46■□□□□ 0.07
CAPN1-214ENST00000528165 ZCCHC18P0CG32 403 aa15.46■□□□□ 0.07
CAPN1-214ENST00000528165 CDK16Q00536 496 aa15.46■□□□□ 0.07
CAPN1-214ENST00000528165 PDIA2Q13087 525 aaKnown RBP15.46■□□□□ 0.07
CAPN1-214ENST00000528165 PADI6Q6TGC4 694 aa15.46■□□□□ 0.07
CAPN1-214ENST00000528165 KATNAL2Q8IYT4 538 aa15.46■□□□□ 0.07
CAPN1-214ENST00000528165 TCP10LQ8TDR4 215 aa15.46■□□□□ 0.07
CAPN1-214ENST00000528165 CPA5Q8WXQ8 436 aa15.46■□□□□ 0.07
CAPN1-214ENST00000528165 ITFG2Q969R8 447 aa15.46■□□□□ 0.07
CAPN1-214ENST00000528165 DDX50Q9BQ39 737 aaKnown RBP15.46■□□□□ 0.07
CAPN1-214ENST00000528165 TMEM120AQ9BXJ8 343 aa15.46■□□□□ 0.07
CAPN1-214ENST00000528165 VPS11Q9H270 941 aa15.46■□□□□ 0.07
CAPN1-214ENST00000528165 VCX3BQ9H321 246 aa15.46■□□□□ 0.07
CAPN1-214ENST00000528165 VCX3AQ9NNX9 186 aa15.46■□□□□ 0.07
CAPN1-214ENST00000528165 NYAP2Q9P242 653 aa15.46■□□□□ 0.07
CAPN1-214ENST00000528165 UMODL1Q5DID0 1318 aa15.46■□□□□ 0.07
CAPN1-214ENST00000528165 WNK3Q9BYP7 1800 aa15.46■□□□□ 0.07
CAPN1-214ENST00000528165 GNPATO15228 680 aa15.46■□□□□ 0.07
CAPN1-214ENST00000528165 TM9SF1O15321 606 aa15.46■□□□□ 0.07
CAPN1-214ENST00000528165 CALCAP01258 141 aa15.46■□□□□ 0.07
CAPN1-214ENST00000528165 ADRB2P07550 413 aa15.46■□□□□ 0.07
CAPN1-214ENST00000528165 NOP14P78316 857 aaKnown RBP15.46■□□□□ 0.07
CAPN1-214ENST00000528165 KRT72Q14CN4 511 aa15.46■□□□□ 0.07
CAPN1-214ENST00000528165 MORF4L2Q15014 288 aa15.46■□□□□ 0.07
CAPN1-214ENST00000528165 WDR72Q3MJ13 1102 aa15.46■□□□□ 0.07
CAPN1-214ENST00000528165 C2CD6Q53TS8 623 aa15.46■□□□□ 0.07
CAPN1-214ENST00000528165 LLGL2Q6P1M3 1020 aa15.46■□□□□ 0.07
CAPN1-214ENST00000528165 RPGRQ92834 1020 aaKnown RBP15.46■□□□□ 0.07
CAPN1-214ENST00000528165 SKA1Q96BD8 255 aa15.46■□□□□ 0.07
CAPN1-214ENST00000528165 IWS1Q96ST2 819 aa15.46■□□□□ 0.07
CAPN1-214ENST00000528165 ALG13Q9NP73 1137 aaKnown RBP15.46■□□□□ 0.07
CAPN1-214ENST00000528165 USTQ9Y2C2 406 aa15.46■□□□□ 0.07
CAPN1-214ENST00000528165 LIASO43766 372 aa15.45■□□□□ 0.06
CAPN1-214ENST00000528165 RPS6KA4O75676 772 aa15.45■□□□□ 0.06
CAPN1-214ENST00000528165 UNGP13051 313 aaPredicted RBP15.45■□□□□ 0.06
CAPN1-214ENST00000528165 NSFP46459 744 aaKnown RBP15.45■□□□□ 0.06
CAPN1-214ENST00000528165 TBC1D25Q3MII6 688 aa15.45■□□□□ 0.06
CAPN1-214ENST00000528165 EFHC2Q5JST6 749 aa15.45■□□□□ 0.06
CAPN1-214ENST00000528165 ZFYVE27Q5T4F4 411 aa15.45■□□□□ 0.06
CAPN1-214ENST00000528165 KAZNQ674X7 775 aa15.45■□□□□ 0.06
CAPN1-214ENST00000528165 LRRC6Q86X45 466 aa15.45■□□□□ 0.06
CAPN1-214ENST00000528165 EXD1Q8NHP7 514 aa15.45■□□□□ 0.06
CAPN1-214ENST00000528165 FAM81AQ8TBF8 368 aa15.45■□□□□ 0.06
CAPN1-214ENST00000528165 TMEM174Q8WUU8 243 aa15.45■□□□□ 0.06
CAPN1-214ENST00000528165 PRR11Q96HE9 360 aaPredicted RBP15.45■□□□□ 0.06
CAPN1-214ENST00000528165 WDR11Q9BZH6 1224 aa15.45■□□□□ 0.06
CAPN1-214ENST00000528165 DNPEPQ9ULA0 475 aa15.45■□□□□ 0.06
CAPN1-214ENST00000528165 GOLGA8RI6L899 631 aa15.45■□□□□ 0.06
CAPN1-214ENST00000528165 RARBP10826 455 aa15.45■□□□□ 0.06
CAPN1-214ENST00000528165 RANBP1P43487 201 aa15.45■□□□□ 0.06
CAPN1-214ENST00000528165 NEK3P51956 506 aa15.45■□□□□ 0.06
CAPN1-214ENST00000528165 TAS2R40P59535 323 aa15.45■□□□□ 0.06
CAPN1-214ENST00000528165 SHROOM1Q2M3G4 852 aaPredicted RBP15.45■□□□□ 0.06
CAPN1-214ENST00000528165 RFX8Q6ZV50 586 aa15.45■□□□□ 0.06
CAPN1-214ENST00000528165 ANKMY2Q8IV38 441 aa15.45■□□□□ 0.06
CAPN1-214ENST00000528165 ELMO3Q96BJ8 720 aa15.45■□□□□ 0.06
CAPN1-214ENST00000528165 FAM161BQ96MY7 647 aa15.45■□□□□ 0.06
CAPN1-214ENST00000528165 ASCC2Q9H1I8 757 aaPredicted RBP15.45■□□□□ 0.06
CAPN1-214ENST00000528165 UNC45AQ9H3U1 944 aa15.45■□□□□ 0.06
CAPN1-214ENST00000528165 DDX43Q9NXZ2 648 aaKnown RBP15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms