RNA–Protein interactions for RNA: ENST00000528001.1

CNKSR1-211, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

TSL 4

Gene CNKSR1, Length 553 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-211ENST00000528001 C1orf220Q5T0J3 134 aa14.07□□□□□ -0.16
CNKSR1-211ENST00000528001 TPGS2Q68CL5 300 aa14.07□□□□□ -0.16
CNKSR1-211ENST00000528001 ANKRD54Q6NXT1 300 aa14.07□□□□□ -0.16
CNKSR1-211ENST00000528001 PRSS55Q6UWB4 352 aaPredicted RBP14.07□□□□□ -0.16
CNKSR1-211ENST00000528001 METTL23Q86XA0 190 aa14.07□□□□□ -0.16
CNKSR1-211ENST00000528001 SMRP1Q8NCR6 262 aa14.07□□□□□ -0.16
CNKSR1-211ENST00000528001 ZNF461Q8TAF7 563 aa14.07□□□□□ -0.16
CNKSR1-211ENST00000528001 SYAP1Q96A49 352 aaPredicted RBP14.07□□□□□ -0.16
CNKSR1-211ENST00000528001 HPDLQ96IR7 371 aa14.07□□□□□ -0.16
CNKSR1-211ENST00000528001 B3GALT6Q96L58 329 aa14.07□□□□□ -0.16
CNKSR1-211ENST00000528001 POP1Q99575 1024 aaKnown RBP14.07□□□□□ -0.16
CNKSR1-211ENST00000528001 DUSP9Q99956 384 aaKnown RBP14.07□□□□□ -0.16
CNKSR1-211ENST00000528001 TMEM8AQ9HCN3 771 aa14.07□□□□□ -0.16
CNKSR1-211ENST00000528001 HSFX1Q9UBD0 423 aa14.07□□□□□ -0.16
CNKSR1-211ENST00000528001 VWA8A3KMH1 1905 aa14.07□□□□□ -0.16
CNKSR1-211ENST00000528001 UNC80Q8N2C7 3258 aa14.06□□□□□ -0.16
CNKSR1-211ENST00000528001 TRIM49BA6NDI0 452 aa14.06□□□□□ -0.16
CNKSR1-211ENST00000528001 I3L4J1 428 aa14.06□□□□□ -0.16
CNKSR1-211ENST00000528001 CYB561D2O14569 222 aa14.06□□□□□ -0.16
CNKSR1-211ENST00000528001 LINC01565O15544 149 aa14.06□□□□□ -0.16
CNKSR1-211ENST00000528001 HUS1O60921 280 aa14.06□□□□□ -0.16
CNKSR1-211ENST00000528001 ABLIM3O94929 683 aa14.06□□□□□ -0.16
CNKSR1-211ENST00000528001 CSPG5O95196 566 aa14.06□□□□□ -0.16
CNKSR1-211ENST00000528001 KRT19P08727 400 aa14.06□□□□□ -0.16
CNKSR1-211ENST00000528001 SMAD4Q13485 552 aaKnown RBP14.06□□□□□ -0.16
CNKSR1-211ENST00000528001 TRPC3Q13507 836 aa14.06□□□□□ -0.16
CNKSR1-211ENST00000528001 KLHL40Q2TBA0 621 aa14.06□□□□□ -0.16
CNKSR1-211ENST00000528001 CTXN3Q4LDR2 81 aa14.06□□□□□ -0.16
CNKSR1-211ENST00000528001 TDRD10Q5VZ19 366 aaKnown RBP14.06□□□□□ -0.16
CNKSR1-211ENST00000528001 LMBRD2Q68DH5 695 aaPredicted RBP14.06□□□□□ -0.16
CNKSR1-211ENST00000528001 OVOS1Q6IE37 1185 aa14.06□□□□□ -0.16
CNKSR1-211ENST00000528001 KLHL10Q6JEL2 608 aa14.06□□□□□ -0.16
CNKSR1-211ENST00000528001 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.06□□□□□ -0.16
CNKSR1-211ENST00000528001 XYLT2Q9H1B5 865 aa14.06□□□□□ -0.16
CNKSR1-211ENST00000528001 FAM124BQ9H5Z6 455 aaPredicted RBP14.06□□□□□ -0.16
CNKSR1-211ENST00000528001 SFXN1Q9H9B4 322 aa14.06□□□□□ -0.16
CNKSR1-211ENST00000528001 ZDHHC7Q9NXF8 308 aa14.06□□□□□ -0.16
CNKSR1-211ENST00000528001 ARMCX3Q9UH62 379 aaPredicted RBP14.06□□□□□ -0.16
CNKSR1-211ENST00000528001 CD207Q9UJ71 328 aa14.06□□□□□ -0.16
CNKSR1-211ENST00000528001 FBXL5Q9UKA1 691 aa14.06□□□□□ -0.16
CNKSR1-211ENST00000528001 FBXW11Q9UKB1 542 aa14.06□□□□□ -0.16
CNKSR1-211ENST00000528001 CTNND2Q9UQB3 1225 aa14.06□□□□□ -0.16
CNKSR1-211ENST00000528001 CDY1Q9Y6F8 540 aa14.06□□□□□ -0.16
CNKSR1-211ENST00000528001 TGM5O43548 720 aa14.05□□□□□ -0.16
CNKSR1-211ENST00000528001 TACC1O75410 805 aa14.05□□□□□ -0.16
CNKSR1-211ENST00000528001 CST3P01034 146 aaPredicted RBP14.05□□□□□ -0.16
CNKSR1-211ENST00000528001 KCNA5P22460 613 aa14.05□□□□□ -0.16
CNKSR1-211ENST00000528001 OR1D2P34982 312 aa14.05□□□□□ -0.16
CNKSR1-211ENST00000528001 LHX1P48742 406 aa14.05□□□□□ -0.16
CNKSR1-211ENST00000528001 DLG4P78352 724 aa14.05□□□□□ -0.16
CNKSR1-211ENST00000528001 DLX2Q07687 328 aaPredicted RBP14.05□□□□□ -0.16
CNKSR1-211ENST00000528001 GPR17Q13304 367 aa14.05□□□□□ -0.16
CNKSR1-211ENST00000528001 NCOA4Q13772 614 aa14.05□□□□□ -0.16
CNKSR1-211ENST00000528001 SGSM1Q2NKQ1 1148 aa14.05□□□□□ -0.16
CNKSR1-211ENST00000528001 KRT39Q6A163 491 aa14.05□□□□□ -0.16
CNKSR1-211ENST00000528001 RSPO2Q6UXX9 243 aaPredicted RBP14.05□□□□□ -0.16
CNKSR1-211ENST00000528001 SV2AQ7L0J3 742 aa14.05□□□□□ -0.16
CNKSR1-211ENST00000528001 THEM5Q8N1Q8 247 aa14.05□□□□□ -0.16
CNKSR1-211ENST00000528001 TMEM130Q8N3G9 435 aa14.05□□□□□ -0.16
CNKSR1-211ENST00000528001 C2orf15Q8WU43 125 aaKnown RBP14.05□□□□□ -0.16
CNKSR1-211ENST00000528001 ASB2Q96Q27 587 aa14.05□□□□□ -0.16
CNKSR1-211ENST00000528001 S1PR5Q9H228 398 aa14.05□□□□□ -0.16
CNKSR1-211ENST00000528001 ADAM7Q9H2U9 754 aa14.05□□□□□ -0.16
CNKSR1-211ENST00000528001 A0A0C4DFX4 3053 aa14.04□□□□□ -0.16
CNKSR1-211ENST00000528001 TSC2P49815 1807 aa14.04□□□□□ -0.16
CNKSR1-211ENST00000528001 GABRDO14764 452 aa14.04□□□□□ -0.16
CNKSR1-211ENST00000528001 P4HA2O15460 535 aa14.04□□□□□ -0.16
CNKSR1-211ENST00000528001 PHACTR2O75167 634 aa14.04□□□□□ -0.16
CNKSR1-211ENST00000528001 LETM1O95202 739 aaPredicted RBP14.04□□□□□ -0.16
CNKSR1-211ENST00000528001 VNN1O95497 513 aa14.04□□□□□ -0.16
CNKSR1-211ENST00000528001 ASS1P00966 412 aaKnown RBP14.04□□□□□ -0.16
CNKSR1-211ENST00000528001 HNRNPA1P09651 372 aaKnown RBP eCLIP14.04□□□□□ -0.16
CNKSR1-211ENST00000528001 P4HA1P13674 534 aa14.04□□□□□ -0.16
CNKSR1-211ENST00000528001 ATF2P15336 505 aa14.04□□□□□ -0.16
CNKSR1-211ENST00000528001 EPCAMP16422 314 aa14.04□□□□□ -0.16
CNKSR1-211ENST00000528001 ROR1Q01973 937 aa14.04□□□□□ -0.16
CNKSR1-211ENST00000528001 PPP3CAQ08209 521 aa14.04□□□□□ -0.16
CNKSR1-211ENST00000528001 BIRC3Q13489 604 aa14.04□□□□□ -0.16
CNKSR1-211ENST00000528001 DPCR1Q3MIW9 517 aa14.04□□□□□ -0.16
CNKSR1-211ENST00000528001 SYCE2Q6PIF2 218 aa14.04□□□□□ -0.16
CNKSR1-211ENST00000528001 CCDC149Q6ZUS6 474 aa14.04□□□□□ -0.16
CNKSR1-211ENST00000528001 PDCL2Q8N4E4 241 aa14.04□□□□□ -0.16
CNKSR1-211ENST00000528001 KREMEN2Q8NCW0 462 aa14.04□□□□□ -0.16
CNKSR1-211ENST00000528001 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.04□□□□□ -0.16
CNKSR1-211ENST00000528001 SUSD6Q92537 303 aa14.04□□□□□ -0.16
CNKSR1-211ENST00000528001 SLC35C1Q96A29 364 aa14.04□□□□□ -0.16
CNKSR1-211ENST00000528001 NECTIN4Q96NY8 510 aa14.04□□□□□ -0.16
CNKSR1-211ENST00000528001 ACBD6Q9BR61 282 aa14.04□□□□□ -0.16
CNKSR1-211ENST00000528001 PRDM6Q9NQX0 595 aa14.04□□□□□ -0.16
CNKSR1-211ENST00000528001 MAN1C1Q9NR34 630 aa14.04□□□□□ -0.16
CNKSR1-211ENST00000528001 PRKAG3Q9UGI9 489 aa14.04□□□□□ -0.16
CNKSR1-211ENST00000528001 AFF4Q9UHB7 1163 aaKnown RBP14.04□□□□□ -0.16
CNKSR1-211ENST00000528001 BARX2Q9UMQ3 279 aaPredicted RBP14.04□□□□□ -0.16
CNKSR1-211ENST00000528001 L1RE1Q9UN81 338 aa14.04□□□□□ -0.16
CNKSR1-211ENST00000528001 COQ4Q9Y3A0 265 aa14.04□□□□□ -0.16
CNKSR1-211ENST00000528001 SNX9Q9Y5X1 595 aa14.04□□□□□ -0.16
CNKSR1-211ENST00000528001 WDR27A2RRH5 827 aa14.03□□□□□ -0.16
CNKSR1-211ENST00000528001 GRXCR2A6NFK2 248 aa14.03□□□□□ -0.16
CNKSR1-211ENST00000528001 ADAM12O43184 909 aa14.03□□□□□ -0.16
CNKSR1-211ENST00000528001 MBTPS2O43462 519 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms