RNA–Protein interactions for RNA: ENST00000527739.5

CAPN1-211, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-211ENST00000527739 CYB561D2O14569 222 aa20.84■□□□□ 0.93
CAPN1-211ENST00000527739 TYMPP19971 482 aa20.84■□□□□ 0.93
CAPN1-211ENST00000527739 GARTP22102 1010 aa20.84■□□□□ 0.93
CAPN1-211ENST00000527739 PAX3P23760 479 aa20.84■□□□□ 0.93
CAPN1-211ENST00000527739 NBL1P41271 181 aa20.84■□□□□ 0.93
CAPN1-211ENST00000527739 TAF6P49848 677 aa20.84■□□□□ 0.93
CAPN1-211ENST00000527739 DNM1Q05193 864 aaKnown RBP20.84■□□□□ 0.93
CAPN1-211ENST00000527739 SLC5A9Q2M3M2 681 aa20.84■□□□□ 0.93
CAPN1-211ENST00000527739 PDZD4Q76G19 769 aaPredicted RBP20.84■□□□□ 0.93
CAPN1-211ENST00000527739 METTL23Q86XA0 190 aa20.84■□□□□ 0.93
CAPN1-211ENST00000527739 NPAS3Q8IXF0 933 aa20.84■□□□□ 0.93
CAPN1-211ENST00000527739 KXD1Q9BQD3 176 aa20.84■□□□□ 0.93
CAPN1-211ENST00000527739 CBWD1Q9BRT8 395 aa20.84■□□□□ 0.93
CAPN1-211ENST00000527739 TRIM9Q9C026 710 aa20.84■□□□□ 0.93
CAPN1-211ENST00000527739 KBTBD4Q9NVX7 518 aa20.84■□□□□ 0.93
CAPN1-211ENST00000527739 RBAKQ9NYW8 714 aaPredicted RBP20.84■□□□□ 0.93
CAPN1-211ENST00000527739 MAFFQ9ULX9 164 aa20.84■□□□□ 0.93
CAPN1-211ENST00000527739 ANO9A1A5B4 782 aa20.83■□□□□ 0.93
CAPN1-211ENST00000527739 PRR23AA6NEV1 266 aa20.83■□□□□ 0.93
CAPN1-211ENST00000527739 ZNF197O14709 1029 aa20.83■□□□□ 0.93
CAPN1-211ENST00000527739 MYL4P12829 197 aa20.83■□□□□ 0.93
CAPN1-211ENST00000527739 CLCN5P51795 746 aa20.83■□□□□ 0.93
CAPN1-211ENST00000527739 CDR1P51861 262 aa20.83■□□□□ 0.93
CAPN1-211ENST00000527739 GPC5P78333 572 aa20.83■□□□□ 0.93
CAPN1-211ENST00000527739 POU5F1Q01860 360 aaKnown RBP20.83■□□□□ 0.93
CAPN1-211ENST00000527739 DUSP4Q13115 394 aa20.83■□□□□ 0.93
CAPN1-211ENST00000527739 ATL3Q6DD88 541 aa20.83■□□□□ 0.93
CAPN1-211ENST00000527739 FRMD5Q7Z6J6 570 aa20.83■□□□□ 0.93
CAPN1-211ENST00000527739 EFCAB13Q8IY85 973 aa20.83■□□□□ 0.93
CAPN1-211ENST00000527739 HS6ST3Q8IZP7 471 aa20.83■□□□□ 0.93
CAPN1-211ENST00000527739 GLIS3Q8NEA6 775 aa20.83■□□□□ 0.93
CAPN1-211ENST00000527739 CACTINQ8WUQ7 758 aaKnown RBP20.83■□□□□ 0.93
CAPN1-211ENST00000527739 TCEAL4Q96EI5 215 aa20.83■□□□□ 0.93
CAPN1-211ENST00000527739 SLC27A5Q9Y2P5 690 aa20.83■□□□□ 0.93
CAPN1-211ENST00000527739 KRBA1A5PL33 1030 aa20.82■□□□□ 0.92
CAPN1-211ENST00000527739 EXTL3O43909 919 aa20.82■□□□□ 0.92
CAPN1-211ENST00000527739 CEBPBP17676 345 aa20.82■□□□□ 0.92
CAPN1-211ENST00000527739 GPR17Q13304 367 aa20.82■□□□□ 0.92
CAPN1-211ENST00000527739 BRSK2Q8IWQ3 736 aa20.82■□□□□ 0.92
CAPN1-211ENST00000527739 THEM5Q8N1Q8 247 aa20.82■□□□□ 0.92
CAPN1-211ENST00000527739 TMEM209Q96SK2 561 aa20.82■□□□□ 0.92
CAPN1-211ENST00000527739 BLZF1Q9H2G9 400 aa20.82■□□□□ 0.92
CAPN1-211ENST00000527739 GDE1Q9NZC3 331 aa20.82■□□□□ 0.92
CAPN1-211ENST00000527739 CEP72Q9P209 647 aa20.82■□□□□ 0.92
CAPN1-211ENST00000527739 DSEQ9UL01 958 aa20.82■□□□□ 0.92
CAPN1-211ENST00000527739 YIPF1Q9Y548 306 aa20.82■□□□□ 0.92
CAPN1-211ENST00000527739 VPS13AQ96RL7 3174 aa20.81■□□□□ 0.92
CAPN1-211ENST00000527739 CASP1P29466 404 aa20.81■□□□□ 0.92
CAPN1-211ENST00000527739 AFMP43652 599 aa20.81■□□□□ 0.92
CAPN1-211ENST00000527739 ALDH1A3P47895 512 aa20.81■□□□□ 0.92
CAPN1-211ENST00000527739 EPHB3P54753 998 aa20.81■□□□□ 0.92
CAPN1-211ENST00000527739 WNT7BP56706 349 aa20.81■□□□□ 0.92
CAPN1-211ENST00000527739 MYBPC2Q14324 1141 aa20.81■□□□□ 0.92
CAPN1-211ENST00000527739 SV2CQ496J9 727 aa20.81■□□□□ 0.92
CAPN1-211ENST00000527739 NT5DC4Q86YG4 428 aa20.81■□□□□ 0.92
CAPN1-211ENST00000527739 ATAD1Q8NBU5 361 aa20.81■□□□□ 0.92
CAPN1-211ENST00000527739 C7orf25Q9BPX7 421 aa20.81■□□□□ 0.92
CAPN1-211ENST00000527739 PDE11AQ9HCR9 933 aa20.81■□□□□ 0.92
CAPN1-211ENST00000527739 ASAH2Q9NR71 780 aa20.81■□□□□ 0.92
CAPN1-211ENST00000527739 AGAP1Q9UPQ3 857 aa20.81■□□□□ 0.92
CAPN1-211ENST00000527739 KPNA7A9QM74 516 aa20.8■□□□□ 0.92
CAPN1-211ENST00000527739 KRT19P08727 400 aa20.8■□□□□ 0.92
CAPN1-211ENST00000527739 AOC1P19801 751 aa20.8■□□□□ 0.92
CAPN1-211ENST00000527739 POLR2BP30876 1174 aaKnown RBP20.8■□□□□ 0.92
CAPN1-211ENST00000527739 PLD1Q13393 1074 aa20.8■□□□□ 0.92
CAPN1-211ENST00000527739 SLC39A12Q504Y0 691 aa20.8■□□□□ 0.92
CAPN1-211ENST00000527739 FAM26FQ5R3K3 315 aa20.8■□□□□ 0.92
CAPN1-211ENST00000527739 WSCD1Q658N2 575 aa20.8■□□□□ 0.92
CAPN1-211ENST00000527739 CEP57L1Q8IYX8 460 aa20.8■□□□□ 0.92
CAPN1-211ENST00000527739 GPD1LQ8N335 351 aa20.8■□□□□ 0.92
CAPN1-211ENST00000527739 CSGALNACT2Q8N6G5 542 aa20.8■□□□□ 0.92
CAPN1-211ENST00000527739 ZNF560Q96MR9 790 aa20.8■□□□□ 0.92
CAPN1-211ENST00000527739 RTP3Q9BQQ7 232 aa20.8■□□□□ 0.92
CAPN1-211ENST00000527739 TBC1D17Q9HA65 648 aa20.8■□□□□ 0.92
CAPN1-211ENST00000527739 AVENQ9NQS1 362 aaPredicted RBP20.8■□□□□ 0.92
CAPN1-211ENST00000527739 ARHGEF3Q9NR81 526 aa20.8■□□□□ 0.92
CAPN1-211ENST00000527739 SLC2A4RGQ9NR83 387 aa20.8■□□□□ 0.92
CAPN1-211ENST00000527739 R3HCC1Q9Y3T6 440 aaKnown RBP20.8■□□□□ 0.92
CAPN1-211ENST00000527739 MTMR11A4FU01 709 aa20.79■□□□□ 0.92
CAPN1-211ENST00000527739 SOAT2O75908 522 aa20.79■□□□□ 0.92
CAPN1-211ENST00000527739 VNN2O95498 520 aa20.79■□□□□ 0.92
CAPN1-211ENST00000527739 ITGB3P05106 788 aa20.79■□□□□ 0.92
CAPN1-211ENST00000527739 TMEM191BP0C7N4 346 aa20.79■□□□□ 0.92
CAPN1-211ENST00000527739 GJA1P17302 382 aa20.79■□□□□ 0.92
CAPN1-211ENST00000527739 CCR2P41597 374 aa20.79■□□□□ 0.92
CAPN1-211ENST00000527739 BFSP1Q12934 665 aa20.79■□□□□ 0.92
CAPN1-211ENST00000527739 RESP18Q5W5W9 173 aa20.79■□□□□ 0.92
CAPN1-211ENST00000527739 LMBRD2Q68DH5 695 aaPredicted RBP20.79■□□□□ 0.92
CAPN1-211ENST00000527739 CENPPQ6IPU0 288 aa20.79■□□□□ 0.92
CAPN1-211ENST00000527739 NELFCDQ8IXH7 590 aa20.79■□□□□ 0.92
CAPN1-211ENST00000527739 OR10T2Q8NGX3 314 aa20.79■□□□□ 0.92
CAPN1-211ENST00000527739 FAM200AQ8TCP9 573 aa20.79■□□□□ 0.92
CAPN1-211ENST00000527739 FAM84AQ96KN4 292 aa20.79■□□□□ 0.92
CAPN1-211ENST00000527739 SEPT5Q99719 369 aaPredicted RBP20.79■□□□□ 0.92
CAPN1-211ENST00000527739 CRISPLD1Q9H336 500 aa20.79■□□□□ 0.92
CAPN1-211ENST00000527739 SLITRK6Q9H5Y7 841 aa20.79■□□□□ 0.92
CAPN1-211ENST00000527739 MAGEF1Q9HAY2 307 aa20.79■□□□□ 0.92
CAPN1-211ENST00000527739 RCOR1Q9UKL0 485 aa20.79■□□□□ 0.92
CAPN1-211ENST00000527739 ZNF233A6NK53 670 aa20.78■□□□□ 0.92
CAPN1-211ENST00000527739 CYP11A1P05108 521 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms