RNA–Protein interactions for RNA: ENST00000527469.1

CAPN1-209, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-209ENST00000527469 OTOP3Q7RTS5 596 aa14.42□□□□□ -0.1
CAPN1-209ENST00000527469 LRRC52Q8N7C0 313 aa14.42□□□□□ -0.1
CAPN1-209ENST00000527469 TDRD5Q8NAT2 981 aaKnown RBP14.42□□□□□ -0.1
CAPN1-209ENST00000527469 ACSF2Q96CM8 615 aaPredicted RBP14.42□□□□□ -0.1
CAPN1-209ENST00000527469 CGRRF1Q99675 332 aa14.42□□□□□ -0.1
CAPN1-209ENST00000527469 TSG101Q99816 390 aa14.42□□□□□ -0.1
CAPN1-209ENST00000527469 PRKD2Q9BZL6 878 aa14.42□□□□□ -0.1
CAPN1-209ENST00000527469 KCTD10Q9H3F6 313 aa14.42□□□□□ -0.1
CAPN1-209ENST00000527469 CYP4F11Q9HBI6 524 aa14.42□□□□□ -0.1
CAPN1-209ENST00000527469 C19orf67A6NJJ6 358 aa14.41□□□□□ -0.1
CAPN1-209ENST00000527469 ALADP13716 330 aa14.41□□□□□ -0.1
CAPN1-209ENST00000527469 NR2F2P24468 414 aa14.41□□□□□ -0.1
CAPN1-209ENST00000527469 BIRC3Q13489 604 aa14.41□□□□□ -0.1
CAPN1-209ENST00000527469 MRPL58Q14197 206 aaKnown RBP14.41□□□□□ -0.1
CAPN1-209ENST00000527469 MYBPC2Q14324 1141 aa14.41□□□□□ -0.1
CAPN1-209ENST00000527469 UVSSAQ2YD98 709 aa14.41□□□□□ -0.1
CAPN1-209ENST00000527469 RTL10Q7L3V2 364 aa14.41□□□□□ -0.1
CAPN1-209ENST00000527469 SLC9A9Q8IVB4 645 aa14.41□□□□□ -0.1
CAPN1-209ENST00000527469 SMYD4Q8IYR2 804 aaPredicted RBP14.41□□□□□ -0.1
CAPN1-209ENST00000527469 ELMOD1Q8N336 334 aa14.41□□□□□ -0.1
CAPN1-209ENST00000527469 OR5B17Q8NGF7 314 aa14.41□□□□□ -0.1
CAPN1-209ENST00000527469 HPDLQ96IR7 371 aa14.41□□□□□ -0.1
CAPN1-209ENST00000527469 FAM84AQ96KN4 292 aa14.41□□□□□ -0.1
CAPN1-209ENST00000527469 CD320Q9NPF0 282 aa14.41□□□□□ -0.1
CAPN1-209ENST00000527469 PCDHA5Q9Y5H7 936 aa14.41□□□□□ -0.1
CAPN1-209ENST00000527469 CLUHO75153 1309 aa14.41□□□□□ -0.1
CAPN1-209ENST00000527469 WDR27A2RRH5 827 aa14.4□□□□□ -0.1
CAPN1-209ENST00000527469 LOC730098B7Z3J9 87 aa14.4□□□□□ -0.1
CAPN1-209ENST00000527469 CCL16O15467 120 aa14.4□□□□□ -0.1
CAPN1-209ENST00000527469 TBC1D4O60343 1298 aa14.4□□□□□ -0.1
CAPN1-209ENST00000527469 KRT13P13646 458 aa14.4□□□□□ -0.1
CAPN1-209ENST00000527469 ATF2P15336 505 aa14.4□□□□□ -0.1
CAPN1-209ENST00000527469 AP3M2P53677 418 aa14.4□□□□□ -0.1
CAPN1-209ENST00000527469 ADCY1Q08828 1119 aa14.4□□□□□ -0.1
CAPN1-209ENST00000527469 ZNF658Q5TYW1 1059 aaPredicted RBP14.4□□□□□ -0.1
CAPN1-209ENST00000527469 TRAPPC11Q7Z392 1133 aa14.4□□□□□ -0.1
CAPN1-209ENST00000527469 ERCC4Q92889 916 aaPredicted RBP14.4□□□□□ -0.1
CAPN1-209ENST00000527469 MFSD14AQ96MC6 490 aa14.4□□□□□ -0.1
CAPN1-209ENST00000527469 AFF4Q9UHB7 1163 aaKnown RBP14.4□□□□□ -0.1
CAPN1-209ENST00000527469 MAFFQ9ULX9 164 aa14.4□□□□□ -0.1
CAPN1-209ENST00000527469 TRAF3IP3Q9Y228 551 aa14.4□□□□□ -0.1
CAPN1-209ENST00000527469 SNX9Q9Y5X1 595 aa14.4□□□□□ -0.1
CAPN1-209ENST00000527469 PTPRJQ12913 1337 aa14.4□□□□□ -0.1
CAPN1-209ENST00000527469 ABLIM3O94929 683 aa14.39□□□□□ -0.11
CAPN1-209ENST00000527469 CYP11A1P05108 521 aa14.39□□□□□ -0.11
CAPN1-209ENST00000527469 HOXA9P31269 272 aa14.39□□□□□ -0.11
CAPN1-209ENST00000527469 GBP2P32456 591 aaPredicted RBP14.39□□□□□ -0.11
CAPN1-209ENST00000527469 MYL7Q01449 175 aa14.39□□□□□ -0.11
CAPN1-209ENST00000527469 TSPY1Q01534 308 aa14.39□□□□□ -0.11
CAPN1-209ENST00000527469 ADAM9Q13443 819 aa14.39□□□□□ -0.11
CAPN1-209ENST00000527469 WSCD1Q658N2 575 aa14.39□□□□□ -0.11
CAPN1-209ENST00000527469 GRASPQ7Z6J2 395 aaPredicted RBP14.39□□□□□ -0.11
CAPN1-209ENST00000527469 RNF135Q8IUD6 432 aa14.39□□□□□ -0.11
CAPN1-209ENST00000527469 ELOA2Q8IYF1 753 aaPredicted RBP14.39□□□□□ -0.11
CAPN1-209ENST00000527469 TCEAL8Q8IYN2 117 aa14.39□□□□□ -0.11
CAPN1-209ENST00000527469 PLCD3Q8N3E9 789 aa14.39□□□□□ -0.11
CAPN1-209ENST00000527469 ZNF707Q96C28 371 aaPredicted RBP14.39□□□□□ -0.11
CAPN1-209ENST00000527469 IPO9Q96P70 1041 aaKnown RBP14.39□□□□□ -0.11
CAPN1-209ENST00000527469 PGLYRP2Q96PD5 576 aa14.39□□□□□ -0.11
CAPN1-209ENST00000527469 GBP4Q96PP9 640 aa14.39□□□□□ -0.11
CAPN1-209ENST00000527469 MMS19Q96T76 1030 aa14.39□□□□□ -0.11
CAPN1-209ENST00000527469 RHOBTB2Q9BYZ6 727 aa14.39□□□□□ -0.11
CAPN1-209ENST00000527469 WDR6Q9NNW5 1121 aaKnown RBP14.39□□□□□ -0.11
CAPN1-209ENST00000527469 DMAC2Q9NW81 257 aa14.39□□□□□ -0.11
CAPN1-209ENST00000527469 USTQ9Y2C2 406 aa14.39□□□□□ -0.11
CAPN1-209ENST00000527469 SCN1AP35498 2009 aa14.38□□□□□ -0.11
CAPN1-209ENST00000527469 C5orf42Q9H799 3197 aa14.38□□□□□ -0.11
CAPN1-209ENST00000527469 C2CD4DB7Z1M9 353 aa14.38□□□□□ -0.11
CAPN1-209ENST00000527469 PSMA7O14818 248 aa14.38□□□□□ -0.11
CAPN1-209ENST00000527469 CETN3O15182 167 aa14.38□□□□□ -0.11
CAPN1-209ENST00000527469 DCXO43602 365 aa14.38□□□□□ -0.11
CAPN1-209ENST00000527469 OR4Q2P0C623 313 aa14.38□□□□□ -0.11
CAPN1-209ENST00000527469 FSHRP23945 695 aa14.38□□□□□ -0.11
CAPN1-209ENST00000527469 PSMC2P35998 433 aaKnown RBP14.38□□□□□ -0.11
CAPN1-209ENST00000527469 CASP4P49662 377 aa14.38□□□□□ -0.11
CAPN1-209ENST00000527469 TNNC1P63316 161 aa14.38□□□□□ -0.11
CAPN1-209ENST00000527469 GPR17Q13304 367 aa14.38□□□□□ -0.11
CAPN1-209ENST00000527469 PLD1Q13393 1074 aa14.38□□□□□ -0.11
CAPN1-209ENST00000527469 SLC39A12Q504Y0 691 aa14.38□□□□□ -0.11
CAPN1-209ENST00000527469 ISM2Q6H9L7 571 aa14.38□□□□□ -0.11
CAPN1-209ENST00000527469 IQCEQ6IPM2 695 aa14.38□□□□□ -0.11
CAPN1-209ENST00000527469 RNF19BQ6ZMZ0 732 aa14.38□□□□□ -0.11
CAPN1-209ENST00000527469 INTS8Q75QN2 995 aaKnown RBP14.38□□□□□ -0.11
CAPN1-209ENST00000527469 GET4Q7L5D6 327 aaPredicted RBP14.38□□□□□ -0.11
CAPN1-209ENST00000527469 FAM186BQ8IYM0 893 aa14.38□□□□□ -0.11
CAPN1-209ENST00000527469 DCP1BQ8IZD4 617 aaKnown RBP14.38□□□□□ -0.11
CAPN1-209ENST00000527469 TMEM86AQ8N2M4 240 aa14.38□□□□□ -0.11
CAPN1-209ENST00000527469 PDCL2Q8N4E4 241 aa14.38□□□□□ -0.11
CAPN1-209ENST00000527469 TMEM174Q8WUU8 243 aa14.38□□□□□ -0.11
CAPN1-209ENST00000527469 MUTYHQ9UIF7 546 aa14.38□□□□□ -0.11
CAPN1-209ENST00000527469 SIX4Q9UIU6 781 aa14.38□□□□□ -0.11
CAPN1-209ENST00000527469 INSL5Q9Y5Q6 135 aa14.38□□□□□ -0.11
CAPN1-209ENST00000527469 MTCL1Q9Y4B5 1905 aaKnown RBP14.38□□□□□ -0.11
CAPN1-209ENST00000527469 LRRIQ3A6PVS8 624 aaPredicted RBP14.37□□□□□ -0.11
CAPN1-209ENST00000527469 GOLGA6L22H0YM25 854 aa14.37□□□□□ -0.11
CAPN1-209ENST00000527469 PPP1R2P41236 205 aa14.37□□□□□ -0.11
CAPN1-209ENST00000527469 PRCPP42785 496 aa14.37□□□□□ -0.11
CAPN1-209ENST00000527469 ALDH1A3P47895 512 aa14.37□□□□□ -0.11
CAPN1-209ENST00000527469 VAMP7P51809 220 aa14.37□□□□□ -0.11
CAPN1-209ENST00000527469 EDRF1Q3B7T1 1238 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms