RNA–Protein interactions for RNA: ENST00000527149.5

SMCO4-204, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCO4, Length 472 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-204ENST00000527149 ODC1P11926 461 aa17.88■□□□□ 0.45
SMCO4-204ENST00000527149 RPL17P18621 184 aaKnown RBP17.88■□□□□ 0.45
SMCO4-204ENST00000527149 GTF2F1P35269 517 aaKnown RBP eCLIP17.88■□□□□ 0.45
SMCO4-204ENST00000527149 ZNF165P49910 485 aa17.88■□□□□ 0.45
SMCO4-204ENST00000527149 KCNH2Q12809 1159 aa17.88■□□□□ 0.45
SMCO4-204ENST00000527149 MYO1EQ12965 1108 aa17.88■□□□□ 0.45
SMCO4-204ENST00000527149 TRPC3Q13507 836 aa17.88■□□□□ 0.45
SMCO4-204ENST00000527149 KCNC3Q14003 757 aa17.88■□□□□ 0.45
SMCO4-204ENST00000527149 DUSP6Q16828 381 aa17.88■□□□□ 0.45
SMCO4-204ENST00000527149 SOWAHAQ2M3V2 549 aa17.88■□□□□ 0.45
SMCO4-204ENST00000527149 WSCD1Q658N2 575 aa17.88■□□□□ 0.45
SMCO4-204ENST00000527149 KIAA1841Q6NSI8 718 aa17.88■□□□□ 0.45
SMCO4-204ENST00000527149 ANKS3Q6ZW76 656 aa17.88■□□□□ 0.45
SMCO4-204ENST00000527149 FAM114A1Q8IWE2 563 aa17.88■□□□□ 0.45
SMCO4-204ENST00000527149 PDCL2Q8N4E4 241 aa17.88■□□□□ 0.45
SMCO4-204ENST00000527149 APPL2Q8NEU8 664 aa17.88■□□□□ 0.45
SMCO4-204ENST00000527149 VN1R2Q8NFZ6 395 aa17.88■□□□□ 0.45
SMCO4-204ENST00000527149 MICAL1Q8TDZ2 1067 aa17.88■□□□□ 0.45
SMCO4-204ENST00000527149 KLHL5Q96PQ7 755 aa17.88■□□□□ 0.45
SMCO4-204ENST00000527149 NAT10Q9H0A0 1025 aaKnown RBP17.88■□□□□ 0.45
SMCO4-204ENST00000527149 APOBEC3GQ9HC16 384 aaKnown RBP17.88■□□□□ 0.45
SMCO4-204ENST00000527149 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.88■□□□□ 0.45
SMCO4-204ENST00000527149 FANCLQ9NW38 375 aa17.88■□□□□ 0.45
SMCO4-204ENST00000527149 FNIP2Q9P278 1114 aa17.88■□□□□ 0.45
SMCO4-204ENST00000527149 STXBP5LQ9Y2K9 1186 aa17.88■□□□□ 0.45
SMCO4-204ENST00000527149 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.88■□□□□ 0.45
SMCO4-204ENST00000527149 SNX9Q9Y5X1 595 aa17.88■□□□□ 0.45
SMCO4-204ENST00000527149 BACE2Q9Y5Z0 518 aa17.88■□□□□ 0.45
SMCO4-204ENST00000527149 KCNJ18B7U540 433 aa17.87■□□□□ 0.45
SMCO4-204ENST00000527149 CLASP2O75122 1294 aaKnown RBP17.87■□□□□ 0.45
SMCO4-204ENST00000527149 AFPP02771 609 aaKnown RBP17.87■□□□□ 0.45
SMCO4-204ENST00000527149 EEF1GP26641 437 aaKnown RBP17.87■□□□□ 0.45
SMCO4-204ENST00000527149 MYL7Q01449 175 aa17.87■□□□□ 0.45
SMCO4-204ENST00000527149 KCNJ12Q14500 433 aa17.87■□□□□ 0.45
SMCO4-204ENST00000527149 ZNF699Q32M78 642 aa17.87■□□□□ 0.45
SMCO4-204ENST00000527149 TCP11X2Q5H9J9 407 aa17.87■□□□□ 0.45
SMCO4-204ENST00000527149 MIIPQ5JXC2 388 aa17.87■□□□□ 0.45
SMCO4-204ENST00000527149 SPOPLQ6IQ16 392 aa17.87■□□□□ 0.45
SMCO4-204ENST00000527149 SLC8B1Q6J4K2 584 aa17.87■□□□□ 0.45
SMCO4-204ENST00000527149 PDXDC1Q6P996 788 aa17.87■□□□□ 0.45
SMCO4-204ENST00000527149 APTXQ7Z2E3 356 aaKnown RBP17.87■□□□□ 0.45
SMCO4-204ENST00000527149 OSTM1Q86WC4 334 aa17.87■□□□□ 0.45
SMCO4-204ENST00000527149 TOP6BLQ8N6T0 577 aa17.87■□□□□ 0.45
SMCO4-204ENST00000527149 FBXL13Q8NEE6 735 aa17.87■□□□□ 0.45
SMCO4-204ENST00000527149 KBTBD7Q8WVZ9 684 aa17.87■□□□□ 0.45
SMCO4-204ENST00000527149 TAF4BQ92750 862 aa17.87■□□□□ 0.45
SMCO4-204ENST00000527149 CLSTN3Q9BQT9 956 aa17.87■□□□□ 0.45
SMCO4-204ENST00000527149 PI4K2AQ9BTU6 479 aa17.87■□□□□ 0.45
SMCO4-204ENST00000527149 POLIQ9UNA4 740 aa17.87■□□□□ 0.45
SMCO4-204ENST00000527149 SSX2IPQ9Y2D8 614 aa17.87■□□□□ 0.45
SMCO4-204ENST00000527149 UNC80Q8N2C7 3258 aa17.87■□□□□ 0.45
SMCO4-204ENST00000527149 PER2O15055 1255 aa17.86■□□□□ 0.45
SMCO4-204ENST00000527149 P4HA2O15460 535 aa17.86■□□□□ 0.45
SMCO4-204ENST00000527149 N4BP1O75113 896 aaKnown RBP17.86■□□□□ 0.45
SMCO4-204ENST00000527149 GLP2RO95838 553 aa17.86■□□□□ 0.45
SMCO4-204ENST00000527149 ASPAP45381 313 aa17.86■□□□□ 0.45
SMCO4-204ENST00000527149 NRIP1P48552 1158 aa17.86■□□□□ 0.45
SMCO4-204ENST00000527149 NOP14P78316 857 aaKnown RBP17.86■□□□□ 0.45
SMCO4-204ENST00000527149 RBM10P98175 930 aaKnown RBP17.86■□□□□ 0.45
SMCO4-204ENST00000527149 YWHAHQ04917 246 aaPredicted RBP17.86■□□□□ 0.45
SMCO4-204ENST00000527149 MAN2A1Q16706 1144 aa17.86■□□□□ 0.45
SMCO4-204ENST00000527149 SGSM1Q2NKQ1 1148 aa17.86■□□□□ 0.45
SMCO4-204ENST00000527149 WDR72Q3MJ13 1102 aa17.86■□□□□ 0.45
SMCO4-204ENST00000527149 ZNF280DQ6N043 979 aa17.86■□□□□ 0.45
SMCO4-204ENST00000527149 MICALL1Q8N3F8 863 aa17.86■□□□□ 0.45
SMCO4-204ENST00000527149 OR10T2Q8NGX3 314 aa17.86■□□□□ 0.45
SMCO4-204ENST00000527149 LMO3Q8TAP4 145 aa17.86■□□□□ 0.45
SMCO4-204ENST00000527149 SPATA18Q8TC71 538 aa17.86■□□□□ 0.45
SMCO4-204ENST00000527149 SDCBP2Q9H190 292 aa17.86■□□□□ 0.45
SMCO4-204ENST00000527149 CBX8Q9HC52 389 aa17.86■□□□□ 0.45
SMCO4-204ENST00000527149 RAB20Q9NX57 234 aa17.86■□□□□ 0.45
SMCO4-204ENST00000527149 FBXL5Q9UKA1 691 aa17.86■□□□□ 0.45
SMCO4-204ENST00000527149 DSEQ9UL01 958 aa17.86■□□□□ 0.45
SMCO4-204ENST00000527149 NME7Q9Y5B8 376 aa17.86■□□□□ 0.45
SMCO4-204ENST00000527149 MTCL1Q9Y4B5 1905 aaKnown RBP17.86■□□□□ 0.45
SMCO4-204ENST00000527149 ARHGEF37A1IGU5 675 aa17.85■□□□□ 0.45
SMCO4-204ENST00000527149 GABRDO14764 452 aa17.85■□□□□ 0.45
SMCO4-204ENST00000527149 MTIF2P46199 727 aaKnown RBP17.85■□□□□ 0.45
SMCO4-204ENST00000527149 NDUFV1P49821 464 aa17.85■□□□□ 0.45
SMCO4-204ENST00000527149 ZNF445P59923 1031 aa17.85■□□□□ 0.45
SMCO4-204ENST00000527149 CREMQ03060 361 aa17.85■□□□□ 0.45
SMCO4-204ENST00000527149 BMS1Q14692 1282 aaKnown RBP17.85■□□□□ 0.45
SMCO4-204ENST00000527149 KRT31Q15323 416 aa17.85■□□□□ 0.45
SMCO4-204ENST00000527149 CTC1Q2NKJ3 1217 aa17.85■□□□□ 0.45
SMCO4-204ENST00000527149 OVOS1Q6IE37 1185 aa17.85■□□□□ 0.45
SMCO4-204ENST00000527149 LRSAM1Q6UWE0 723 aa17.85■□□□□ 0.45
SMCO4-204ENST00000527149 DPH6Q7L8W6 267 aa17.85■□□□□ 0.45
SMCO4-204ENST00000527149 RBM23Q86U06 439 aaKnown RBP17.85■□□□□ 0.45
SMCO4-204ENST00000527149 SLC22A17Q8WUG5 538 aa17.85■□□□□ 0.45
SMCO4-204ENST00000527149 CDCA3Q99618 268 aaPredicted RBP17.85■□□□□ 0.45
SMCO4-204ENST00000527149 MRPL45Q9BRJ2 306 aaKnown RBP17.85■□□□□ 0.45
SMCO4-204ENST00000527149 TUBGCP2Q9BSJ2 902 aa17.85■□□□□ 0.45
SMCO4-204ENST00000527149 EMILIN2Q9BXX0 1053 aa17.85■□□□□ 0.45
SMCO4-204ENST00000527149 BCO2Q9BYV7 579 aa17.85■□□□□ 0.45
SMCO4-204ENST00000527149 SMYD3Q9H7B4 428 aa17.85■□□□□ 0.45
SMCO4-204ENST00000527149 TLE6Q9H808 572 aa17.85■□□□□ 0.45
SMCO4-204ENST00000527149 MAGEC2Q9UBF1 373 aaPredicted RBP17.85■□□□□ 0.45
SMCO4-204ENST00000527149 R3HCC1Q9Y3T6 440 aaKnown RBP17.85■□□□□ 0.45
SMCO4-204ENST00000527149 CDY1Q9Y6F8 540 aa17.85■□□□□ 0.45
SMCO4-204ENST00000527149 C5orf42Q9H799 3197 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms