RNA–Protein interactions for RNA: ENST00000526715.5

ATG13-208, Transcript of autophagy related 13, human

TSL 4

Gene ATG13, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATG13-208	ENST00000526715	PSMD5	Q16401	504 aa		13.62	□□□□□ -0.23
ATG13-208	ENST00000526715	WDR72	Q3MJ13	1102 aa		13.62	□□□□□ -0.23
ATG13-208	ENST00000526715	MIIP	Q5JXC2	388 aa		13.62	□□□□□ -0.23
ATG13-208	ENST00000526715	VARS2	Q5ST30	1063 aa	Known RBP	13.62	□□□□□ -0.23
ATG13-208	ENST00000526715	WSCD1	Q658N2	575 aa		13.62	□□□□□ -0.23
ATG13-208	ENST00000526715	SCARA5	Q6ZMJ2	495 aa		13.62	□□□□□ -0.23
ATG13-208	ENST00000526715	GLYCTK	Q8IVS8	523 aa		13.62	□□□□□ -0.23
ATG13-208	ENST00000526715	MICALL1	Q8N3F8	863 aa		13.62	□□□□□ -0.23
ATG13-208	ENST00000526715	FAM200A	Q8TCP9	573 aa		13.62	□□□□□ -0.23
ATG13-208	ENST00000526715	PIK3R5	Q8WYR1	880 aa		13.62	□□□□□ -0.23
ATG13-208	ENST00000526715	APOBEC3G	Q9HC16	384 aa	Known RBP	13.62	□□□□□ -0.23
ATG13-208	ENST00000526715	NGRN	Q9NPE2	291 aa	Known RBP	13.62	□□□□□ -0.23
ATG13-208	ENST00000526715	MRPL17	Q9NRX2	175 aa	Known RBP	13.62	□□□□□ -0.23
ATG13-208	ENST00000526715	RAB20	Q9NX57	234 aa		13.62	□□□□□ -0.23
ATG13-208	ENST00000526715	GDAP2	Q9NXN4	497 aa		13.62	□□□□□ -0.23
ATG13-208	ENST00000526715	NXF1	Q9UBU9	619 aa	Known RBP	13.62	□□□□□ -0.23
ATG13-208	ENST00000526715	STK39	Q9UEW8	545 aa		13.62	□□□□□ -0.23
ATG13-208	ENST00000526715	L1RE1	Q9UN81	338 aa		13.62	□□□□□ -0.23
ATG13-208	ENST00000526715	COQ4	Q9Y3A0	265 aa		13.62	□□□□□ -0.23
ATG13-208	ENST00000526715	PLXNA3	P51805	1871 aa		13.61	□□□□□ -0.23
ATG13-208	ENST00000526715	PES1	O00541	588 aa	Known RBP	13.61	□□□□□ -0.23
ATG13-208	ENST00000526715	HUS1	O60921	280 aa		13.61	□□□□□ -0.23
ATG13-208	ENST00000526715	LILRB3	O75022	631 aa		13.61	□□□□□ -0.23
ATG13-208	ENST00000526715	STAU1	O95793	577 aa	Known RBP	13.61	□□□□□ -0.23
ATG13-208	ENST00000526715	FOSL2	P15408	326 aa		13.61	□□□□□ -0.23
ATG13-208	ENST00000526715	TYMP	P19971	482 aa		13.61	□□□□□ -0.23
ATG13-208	ENST00000526715	PAX3	P23760	479 aa		13.61	□□□□□ -0.23
ATG13-208	ENST00000526715	TNNC1	P63316	161 aa		13.61	□□□□□ -0.23
ATG13-208	ENST00000526715	BMS1	Q14692	1282 aa	Known RBP	13.61	□□□□□ -0.23
ATG13-208	ENST00000526715	SOWAHA	Q2M3V2	549 aa		13.61	□□□□□ -0.23
ATG13-208	ENST00000526715	SGSM1	Q2NKQ1	1148 aa		13.61	□□□□□ -0.23
ATG13-208	ENST00000526715	VWA3B	Q502W6	1294 aa		13.61	□□□□□ -0.23
ATG13-208	ENST00000526715	ZNF667	Q5HYK9	610 aa		13.61	□□□□□ -0.23
ATG13-208	ENST00000526715	PDE12	Q6L8Q7	609 aa	Known RBP	13.61	□□□□□ -0.23
ATG13-208	ENST00000526715	RBM23	Q86U06	439 aa	Known RBP	13.61	□□□□□ -0.23
ATG13-208	ENST00000526715	PDCL2	Q8N4E4	241 aa		13.61	□□□□□ -0.23
ATG13-208	ENST00000526715	MRPL43	Q8N983	215 aa	Known RBP	13.61	□□□□□ -0.23
ATG13-208	ENST00000526715	APPL2	Q8NEU8	664 aa		13.61	□□□□□ -0.23
ATG13-208	ENST00000526715	LNX1	Q8TBB1	728 aa	Predicted RBP	13.61	□□□□□ -0.23
ATG13-208	ENST00000526715	MMS19	Q96T76	1030 aa		13.61	□□□□□ -0.23
ATG13-208	ENST00000526715	IMPG2	Q9BZV3	1241 aa		13.61	□□□□□ -0.23
ATG13-208	ENST00000526715	VPS16	Q9H269	839 aa		13.61	□□□□□ -0.23
ATG13-208	ENST00000526715	NDST4	Q9H3R1	872 aa		13.61	□□□□□ -0.23
ATG13-208	ENST00000526715	NSUN3	Q9H649	340 aa	Known RBP	13.61	□□□□□ -0.23
ATG13-208	ENST00000526715	SMYD3	Q9H7B4	428 aa		13.61	□□□□□ -0.23
ATG13-208	ENST00000526715	VRTN	Q9H8Y1	702 aa		13.61	□□□□□ -0.23
ATG13-208	ENST00000526715	LMCD1	Q9NZU5	365 aa		13.61	□□□□□ -0.23
ATG13-208	ENST00000526715	IRAK3	Q9Y616	596 aa		13.61	□□□□□ -0.23
ATG13-208	ENST00000526715	PER2	O15055	1255 aa		13.6	□□□□□ -0.23
ATG13-208	ENST00000526715	PMM2	O15305	246 aa		13.6	□□□□□ -0.23
ATG13-208	ENST00000526715	P4HA2	O15460	535 aa		13.6	□□□□□ -0.23
ATG13-208	ENST00000526715	TEX28	O15482	410 aa		13.6	□□□□□ -0.23
ATG13-208	ENST00000526715	ADAM12	O43184	909 aa		13.6	□□□□□ -0.23
ATG13-208	ENST00000526715	HCRT	O43612	131 aa		13.6	□□□□□ -0.23
ATG13-208	ENST00000526715	CYP11A1	P05108	521 aa		13.6	□□□□□ -0.23
ATG13-208	ENST00000526715	CNP	P09543	421 aa	Known RBP	13.6	□□□□□ -0.23
ATG13-208	ENST00000526715	POU3F3	P20264	500 aa	Predicted RBP	13.6	□□□□□ -0.23
ATG13-208	ENST00000526715	CDK11B	P21127	795 aa	Known RBP	13.6	□□□□□ -0.23
ATG13-208	ENST00000526715	GTF2F1	P35269	517 aa	Known RBP eCLIP	13.6	□□□□□ -0.23
ATG13-208	ENST00000526715	RAP1GAP	P47736	663 aa		13.6	□□□□□ -0.23
ATG13-208	ENST00000526715	COPB1	P53618	953 aa	Known RBP	13.6	□□□□□ -0.23
ATG13-208	ENST00000526715	YWHAH	Q04917	246 aa	Predicted RBP	13.6	□□□□□ -0.23
ATG13-208	ENST00000526715	LRMP	Q12912	555 aa		13.6	□□□□□ -0.23
ATG13-208	ENST00000526715	CTXN3	Q4LDR2	81 aa		13.6	□□□□□ -0.23
ATG13-208	ENST00000526715	TCEAL5	Q5H9L2	206 aa		13.6	□□□□□ -0.23
ATG13-208	ENST00000526715	OVOS1	Q6IE37	1185 aa		13.6	□□□□□ -0.23
ATG13-208	ENST00000526715	ZNF280D	Q6N043	979 aa		13.6	□□□□□ -0.23
ATG13-208	ENST00000526715	RSPO2	Q6UXX9	243 aa	Predicted RBP	13.6	□□□□□ -0.23
ATG13-208	ENST00000526715	ANKS3	Q6ZW76	656 aa		13.6	□□□□□ -0.23
ATG13-208	ENST00000526715	OSTM1	Q86WC4	334 aa		13.6	□□□□□ -0.23
ATG13-208	ENST00000526715	ADGRF2	Q8IZF7	708 aa		13.6	□□□□□ -0.23
ATG13-208	ENST00000526715	TOP6BL	Q8N6T0	577 aa		13.6	□□□□□ -0.23
ATG13-208	ENST00000526715	RNF214	Q8ND24	703 aa		13.6	□□□□□ -0.23
ATG13-208	ENST00000526715	LMO3	Q8TAP4	145 aa		13.6	□□□□□ -0.23
ATG13-208	ENST00000526715	TAF4B	Q92750	862 aa		13.6	□□□□□ -0.23
ATG13-208	ENST00000526715	TATDN2	Q93075	761 aa		13.6	□□□□□ -0.23
ATG13-208	ENST00000526715	KLHL5	Q96PQ7	755 aa		13.6	□□□□□ -0.23
ATG13-208	ENST00000526715	CRACR2A	Q9BSW2	395 aa		13.6	□□□□□ -0.23
ATG13-208	ENST00000526715	SDCBP2	Q9H190	292 aa		13.6	□□□□□ -0.23
ATG13-208	ENST00000526715	GCNT4	Q9P109	453 aa		13.6	□□□□□ -0.23
ATG13-208	ENST00000526715	MTRR	Q9UBK8	725 aa		13.6	□□□□□ -0.23
ATG13-208	ENST00000526715	LIMA1	Q9UHB6	759 aa	Known RBP	13.6	□□□□□ -0.23
ATG13-208	ENST00000526715	ARHGEF37	A1IGU5	675 aa		13.59	□□□□□ -0.23
ATG13-208	ENST00000526715	ASPA	P45381	313 aa		13.59	□□□□□ -0.23
ATG13-208	ENST00000526715	NRIP1	P48552	1158 aa		13.59	□□□□□ -0.23
ATG13-208	ENST00000526715	MRPL58	Q14197	206 aa	Known RBP	13.59	□□□□□ -0.23
ATG13-208	ENST00000526715	APTX	Q7Z2E3	356 aa	Known RBP	13.59	□□□□□ -0.23
ATG13-208	ENST00000526715	LIMS2	Q7Z4I7	341 aa		13.59	□□□□□ -0.23
ATG13-208	ENST00000526715	METTL23	Q86XA0	190 aa		13.59	□□□□□ -0.23
ATG13-208	ENST00000526715	GAS2L3	Q86XJ1	694 aa		13.59	□□□□□ -0.23
ATG13-208	ENST00000526715	GPR65	Q8IYL9	337 aa		13.59	□□□□□ -0.23
ATG13-208	ENST00000526715	CCDC150	Q8NCX0	1101 aa		13.59	□□□□□ -0.23
ATG13-208	ENST00000526715	ANKRD20A12P	Q8NF67	263 aa		13.59	□□□□□ -0.23
ATG13-208	ENST00000526715	KBTBD7	Q8WVZ9	684 aa		13.59	□□□□□ -0.23
ATG13-208	ENST00000526715	TMEM209	Q96SK2	561 aa		13.59	□□□□□ -0.23
ATG13-208	ENST00000526715	ARID3A	Q99856	593 aa		13.59	□□□□□ -0.23
ATG13-208	ENST00000526715	RTP3	Q9BQQ7	232 aa		13.59	□□□□□ -0.23
ATG13-208	ENST00000526715	CLSTN3	Q9BQT9	956 aa		13.59	□□□□□ -0.23
ATG13-208	ENST00000526715	MRPL45	Q9BRJ2	306 aa	Known RBP	13.59	□□□□□ -0.23
ATG13-208	ENST00000526715	NIF3L1	Q9GZT8	377 aa		13.59	□□□□□ -0.23

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