RNA–Protein interactions for RNA: ENST00000526271.2

CPSF1-201, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-201ENST00000526271 OR10T2Q8NGX3 314 aa15.56■□□□□ 0.08
CPSF1-201ENST00000526271 RIN3Q8TB24 985 aa15.56■□□□□ 0.08
CPSF1-201ENST00000526271 DEPDC1BQ8WUY9 529 aa15.56■□□□□ 0.08
CPSF1-201ENST00000526271 KCNN1Q92952 543 aa15.56■□□□□ 0.08
CPSF1-201ENST00000526271 DRC1Q96MC2 740 aa15.56■□□□□ 0.08
CPSF1-201ENST00000526271 ZNF512Q96ME7 567 aaPredicted RBP15.56■□□□□ 0.08
CPSF1-201ENST00000526271 FIZ1Q96SL8 496 aa15.56■□□□□ 0.08
CPSF1-201ENST00000526271 TCHPQ9BT92 498 aa15.56■□□□□ 0.08
CPSF1-201ENST00000526271 IKZF4Q9H2S9 585 aa15.56■□□□□ 0.08
CPSF1-201ENST00000526271 IL21Q9HBE4 155 aa15.56■□□□□ 0.08
CPSF1-201ENST00000526271 MRPS17Q9Y2R5 130 aaKnown RBP15.56■□□□□ 0.08
CPSF1-201ENST00000526271 RBM19Q9Y4C8 960 aaKnown RBP15.56■□□□□ 0.08
CPSF1-201ENST00000526271 KIAA1549LQ6ZVL6 1849 aa15.56■□□□□ 0.08
CPSF1-201ENST00000526271 GDF9O60383 454 aa15.55■□□□□ 0.08
CPSF1-201ENST00000526271 CPB1P15086 417 aa15.55■□□□□ 0.08
CPSF1-201ENST00000526271 GPR17Q13304 367 aa15.55■□□□□ 0.08
CPSF1-201ENST00000526271 TMEM119Q4V9L6 283 aa15.55■□□□□ 0.08
CPSF1-201ENST00000526271 CYP4A22Q5TCH4 519 aa15.55■□□□□ 0.08
CPSF1-201ENST00000526271 ZPBP2Q6X784 338 aa15.55■□□□□ 0.08
CPSF1-201ENST00000526271 ARID3BQ8IVW6 561 aaPredicted RBP15.55■□□□□ 0.08
CPSF1-201ENST00000526271 TTC8Q8TAM2 541 aa15.55■□□□□ 0.08
CPSF1-201ENST00000526271 FAM126AQ9BYI3 521 aaPredicted RBP15.55■□□□□ 0.08
CPSF1-201ENST00000526271 C17orf75Q9HAS0 396 aa15.55■□□□□ 0.08
CPSF1-201ENST00000526271 ASAH2Q9NR71 780 aa15.55■□□□□ 0.08
CPSF1-201ENST00000526271 POLR3BQ9NW08 1133 aaPredicted RBP15.55■□□□□ 0.08
CPSF1-201ENST00000526271 GTSE1Q9NYZ3 720 aa15.55■□□□□ 0.08
CPSF1-201ENST00000526271 USP18Q9UMW8 372 aa15.55■□□□□ 0.08
CPSF1-201ENST00000526271 TCHHQ07283 1943 aa15.55■□□□□ 0.08
CPSF1-201ENST00000526271 MYBPHLA2RUH7 354 aa15.54■□□□□ 0.08
CPSF1-201ENST00000526271 TISP43B9A030 160 aa15.54■□□□□ 0.08
CPSF1-201ENST00000526271 EIF5BO60841 1220 aaKnown RBP15.54■□□□□ 0.08
CPSF1-201ENST00000526271 CTHP32929 405 aa15.54■□□□□ 0.08
CPSF1-201ENST00000526271 PRPHP41219 470 aa15.54■□□□□ 0.08
CPSF1-201ENST00000526271 NCKAP1LP55160 1127 aa15.54■□□□□ 0.08
CPSF1-201ENST00000526271 ATP2C1P98194 919 aaPredicted RBP15.54■□□□□ 0.08
CPSF1-201ENST00000526271 LMNB2Q03252 620 aa15.54■□□□□ 0.08
CPSF1-201ENST00000526271 YWHAHQ04917 246 aaPredicted RBP15.54■□□□□ 0.08
CPSF1-201ENST00000526271 TNK2Q07912 1038 aa15.54■□□□□ 0.08
CPSF1-201ENST00000526271 KRT79Q5XKE5 535 aa15.54■□□□□ 0.08
CPSF1-201ENST00000526271 APBB1IPQ7Z5R6 666 aaPredicted RBP15.54■□□□□ 0.08
CPSF1-201ENST00000526271 APPL2Q8NEU8 664 aa15.54■□□□□ 0.08
CPSF1-201ENST00000526271 LPIN3Q9BQK8 851 aa15.54■□□□□ 0.08
CPSF1-201ENST00000526271 DAXXQ9UER7 740 aaPredicted RBP15.54■□□□□ 0.08
CPSF1-201ENST00000526271 MAFFQ9ULX9 164 aa15.54■□□□□ 0.08
CPSF1-201ENST00000526271 ZNF638Q14966 1978 aaKnown RBP15.53■□□□□ 0.08
CPSF1-201ENST00000526271 OTOL1A6NHN0 477 aaPredicted RBP15.53■□□□□ 0.08
CPSF1-201ENST00000526271 SPECC1L-ADORA2AF8WAN1 911 aa15.53■□□□□ 0.08
CPSF1-201ENST00000526271 ZNF263O14978 683 aa15.53■□□□□ 0.08
CPSF1-201ENST00000526271 CHADO15335 359 aa15.53■□□□□ 0.08
CPSF1-201ENST00000526271 PAPSS2O95340 614 aaPredicted RBP15.53■□□□□ 0.08
CPSF1-201ENST00000526271 ATF6P18850 670 aa15.53■□□□□ 0.08
CPSF1-201ENST00000526271 CXCL12P48061 93 aa15.53■□□□□ 0.08
CPSF1-201ENST00000526271 CCR3P51677 355 aa15.53■□□□□ 0.08
CPSF1-201ENST00000526271 MLLT6P55198 1093 aaPredicted RBP15.53■□□□□ 0.08
CPSF1-201ENST00000526271 WNT7BP56706 349 aa15.53■□□□□ 0.08
CPSF1-201ENST00000526271 GRIN1Q05586 938 aa15.53■□□□□ 0.08
CPSF1-201ENST00000526271 CCINQ13939 588 aa15.53■□□□□ 0.08
CPSF1-201ENST00000526271 LAIR1Q6GTX8 287 aa15.53■□□□□ 0.08
CPSF1-201ENST00000526271 IQCEQ6IPM2 695 aa15.53■□□□□ 0.08
CPSF1-201ENST00000526271 DNAJB7Q7Z6W7 309 aaPredicted RBP15.53■□□□□ 0.08
CPSF1-201ENST00000526271 TMEM150AQ86TG1 271 aa15.53■□□□□ 0.08
CPSF1-201ENST00000526271 LRRTM3Q86VH5 581 aa15.53■□□□□ 0.08
CPSF1-201ENST00000526271 LEMD2Q8NC56 503 aa15.53■□□□□ 0.08
CPSF1-201ENST00000526271 KIF12Q96FN5 646 aa15.53■□□□□ 0.08
CPSF1-201ENST00000526271 SMG9Q9H0W8 520 aaKnown RBP15.53■□□□□ 0.08
CPSF1-201ENST00000526271 PLEKHA5Q9HAU0 1116 aa15.53■□□□□ 0.08
CPSF1-201ENST00000526271 RXFP3Q9NSD7 469 aa15.53■□□□□ 0.08
CPSF1-201ENST00000526271 BLOC1S4Q9NUP1 217 aa15.53■□□□□ 0.08
CPSF1-201ENST00000526271 PRR5-ARHGAP8B1AHC4 643 aa15.52■□□□□ 0.08
CPSF1-201ENST00000526271 CLDN3O15551 220 aa15.52■□□□□ 0.08
CPSF1-201ENST00000526271 PIGRP01833 764 aa15.52■□□□□ 0.08
CPSF1-201ENST00000526271 NFICP08651 508 aa15.52■□□□□ 0.08
CPSF1-201ENST00000526271 CLTAP09496 248 aa15.52■□□□□ 0.08
CPSF1-201ENST00000526271 PLA2G4BP0C869 781 aa15.52■□□□□ 0.08
CPSF1-201ENST00000526271 CYP3A5P20815 502 aa15.52■□□□□ 0.08
CPSF1-201ENST00000526271 LILRA4P59901 499 aa15.52■□□□□ 0.08
CPSF1-201ENST00000526271 HMGN5P82970 282 aaKnown RBP15.52■□□□□ 0.08
CPSF1-201ENST00000526271 ARHGAP8P85298 464 aa15.52■□□□□ 0.08
CPSF1-201ENST00000526271 CYP4F8P98187 520 aa15.52■□□□□ 0.08
CPSF1-201ENST00000526271 ZRSR1Q15695 479 aaKnown RBP15.52■□□□□ 0.08
CPSF1-201ENST00000526271 NAIF1Q69YI7 327 aaPredicted RBP15.52■□□□□ 0.08
CPSF1-201ENST00000526271 SPEM1Q8N4L4 309 aa15.52■□□□□ 0.08
CPSF1-201ENST00000526271 GPR161Q8N6U8 529 aaKnown RBP15.52■□□□□ 0.08
CPSF1-201ENST00000526271 CELF5Q8N6W0 485 aaKnown RBP15.52■□□□□ 0.08
CPSF1-201ENST00000526271 STKLD1Q8NE28 680 aa15.52■□□□□ 0.08
CPSF1-201ENST00000526271 RTKNQ9BST9 563 aa15.52■□□□□ 0.08
CPSF1-201ENST00000526271 IER2Q9BTL4 223 aa15.52■□□□□ 0.08
CPSF1-201ENST00000526271 CDV3Q9UKY7 258 aaKnown RBP15.52■□□□□ 0.08
CPSF1-201ENST00000526271 UBQLN1Q9UMX0 589 aaKnown RBP15.52■□□□□ 0.08
CPSF1-201ENST00000526271 NOL7Q9UMY1 257 aaKnown RBP15.52■□□□□ 0.08
CPSF1-201ENST00000526271 ANAPC1Q9H1A4 1944 aa15.52■□□□□ 0.07
CPSF1-201ENST00000526271 ANO9A1A5B4 782 aa15.51■□□□□ 0.07
CPSF1-201ENST00000526271 ANKRD63C9JTQ0 380 aa15.51■□□□□ 0.07
CPSF1-201ENST00000526271 PIRO00625 290 aa15.51■□□□□ 0.07
CPSF1-201ENST00000526271 SLC30A4O14863 429 aa15.51■□□□□ 0.07
CPSF1-201ENST00000526271 EXTL3O43909 919 aa15.51■□□□□ 0.07
CPSF1-201ENST00000526271 RETP07949 1114 aa15.51■□□□□ 0.07
CPSF1-201ENST00000526271 ADRB1P08588 477 aa15.51■□□□□ 0.07
CPSF1-201ENST00000526271 TYMPP19971 482 aa15.51■□□□□ 0.07
CPSF1-201ENST00000526271 ZNF131P52739 623 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms