RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 COMTP21964 271 aa5.4□□□□□ -1.54
USP48-211ENST00000526044 ALDH1B1P30837 517 aa5.4□□□□□ -1.54
USP48-211ENST00000526044 GDF5P43026 501 aa5.4□□□□□ -1.54
USP48-211ENST00000526044 ADAM8P78325 824 aa5.4□□□□□ -1.54
USP48-211ENST00000526044 MGAT5Q09328 741 aa5.4□□□□□ -1.54
USP48-211ENST00000526044 G3BP1Q13283 466 aaKnown RBP eCLIP5.4□□□□□ -1.54
USP48-211ENST00000526044 MTX1Q13505 466 aa5.4□□□□□ -1.54
USP48-211ENST00000526044 HDAC1Q13547 482 aaPredicted RBP5.4□□□□□ -1.54
USP48-211ENST00000526044 SPIDRQ14159 915 aa5.4□□□□□ -1.54
USP48-211ENST00000526044 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.4□□□□□ -1.54
USP48-211ENST00000526044 RABL6Q3YEC7 729 aaPredicted RBP5.4□□□□□ -1.54
USP48-211ENST00000526044 ADGRE4PQ86SQ3 457 aa5.4□□□□□ -1.54
USP48-211ENST00000526044 C2CD5Q86YS7 1000 aa5.4□□□□□ -1.54
USP48-211ENST00000526044 CMIPQ8IY22 773 aa5.4□□□□□ -1.54
USP48-211ENST00000526044 PIK3C3Q8NEB9 887 aa5.4□□□□□ -1.54
USP48-211ENST00000526044 SSH3Q8TE77 659 aa5.4□□□□□ -1.54
USP48-211ENST00000526044 COG1Q8WTW3 980 aa5.4□□□□□ -1.54
USP48-211ENST00000526044 RBM17Q96I25 401 aaKnown RBP5.4□□□□□ -1.54
USP48-211ENST00000526044 CDK5RAP1Q96SZ6 601 aaKnown RBP5.4□□□□□ -1.54
USP48-211ENST00000526044 PRDM12Q9H4Q4 367 aa5.4□□□□□ -1.54
USP48-211ENST00000526044 GREM2Q9H772 168 aa5.4□□□□□ -1.54
USP48-211ENST00000526044 C14orf119Q9NWQ9 140 aa5.4□□□□□ -1.54
USP48-211ENST00000526044 SLC5A4Q9NY91 659 aa5.4□□□□□ -1.54
USP48-211ENST00000526044 EVLQ9UI08 416 aaPredicted RBP5.4□□□□□ -1.54
USP48-211ENST00000526044 CDY2AQ9Y6F7 541 aa5.4□□□□□ -1.54
USP48-211ENST00000526044 COL24A1Q17RW2 1714 aa5.4□□□□□ -1.55
USP48-211ENST00000526044 DDX60Q8IY21 1712 aaKnown RBP5.4□□□□□ -1.55
USP48-211ENST00000526044 CASZ1Q86V15 1759 aa5.39□□□□□ -1.55
USP48-211ENST00000526044 A0A1W2PR48 441 aa5.39□□□□□ -1.55
USP48-211ENST00000526044 UBE2QL1A1L167 161 aa5.39□□□□□ -1.55
USP48-211ENST00000526044 KLRG2A4D1S0 409 aaPredicted RBP5.39□□□□□ -1.55
USP48-211ENST00000526044 BBOX1O75936 387 aa5.39□□□□□ -1.55
USP48-211ENST00000526044 ALDH1A2O94788 518 aa5.39□□□□□ -1.55
USP48-211ENST00000526044 SRGNP10124 158 aa5.39□□□□□ -1.55
USP48-211ENST00000526044 NPR1P16066 1061 aa5.39□□□□□ -1.55
USP48-211ENST00000526044 ZNF20P17024 532 aa5.39□□□□□ -1.55
USP48-211ENST00000526044 MSX2P35548 267 aaPredicted RBP5.39□□□□□ -1.55
USP48-211ENST00000526044 IGHMBP2P38935 993 aaKnown RBP5.39□□□□□ -1.55
USP48-211ENST00000526044 SELENOPP49908 381 aa5.39□□□□□ -1.55
USP48-211ENST00000526044 TGFB2P61812 414 aa5.39□□□□□ -1.55
USP48-211ENST00000526044 RPS8P62241 208 aaKnown RBP5.39□□□□□ -1.55
USP48-211ENST00000526044 MRPS9P82933 396 aaKnown RBP5.39□□□□□ -1.55
USP48-211ENST00000526044 AMPD3Q01432 767 aa5.39□□□□□ -1.55
USP48-211ENST00000526044 FOXL1Q12952 345 aa5.39□□□□□ -1.55
USP48-211ENST00000526044 OS9Q13438 667 aaPredicted RBP5.39□□□□□ -1.55
USP48-211ENST00000526044 HSP90AB4PQ58FF6 505 aa5.39□□□□□ -1.55
USP48-211ENST00000526044 ZNF585AQ6P3V2 769 aa5.39□□□□□ -1.55
USP48-211ENST00000526044 LDHAL6AQ6ZMR3 332 aa5.39□□□□□ -1.55
USP48-211ENST00000526044 TAS1R1Q7RTX1 841 aa5.39□□□□□ -1.55
USP48-211ENST00000526044 NECAB2Q7Z6G3 386 aa5.39□□□□□ -1.55
USP48-211ENST00000526044 ANKRD18AQ8IVF6 992 aa5.39□□□□□ -1.55
USP48-211ENST00000526044 CMTM4Q8IZR5 234 aa5.39□□□□□ -1.55
USP48-211ENST00000526044 TGFBRAP1Q8WUH2 860 aa5.39□□□□□ -1.55
USP48-211ENST00000526044 ZNF622Q969S3 477 aaKnown RBP eCLIP5.39□□□□□ -1.553e-16■□□□□ 9.1
USP48-211ENST00000526044 GCC1Q96CN9 775 aa5.39□□□□□ -1.55
USP48-211ENST00000526044 MASTLQ96GX5 879 aa5.39□□□□□ -1.55
USP48-211ENST00000526044 TMEM176AQ96HP8 235 aa5.39□□□□□ -1.55
USP48-211ENST00000526044 PAWRQ96IZ0 340 aaKnown RBP5.39□□□□□ -1.55
USP48-211ENST00000526044 CRAMP1Q96RY5 1269 aa5.39□□□□□ -1.55
USP48-211ENST00000526044 CDC5LQ99459 802 aaKnown RBP5.39□□□□□ -1.55
USP48-211ENST00000526044 MPHOSPH8Q99549 860 aa5.39□□□□□ -1.55
USP48-211ENST00000526044 TCF25Q9BQ70 676 aa5.39□□□□□ -1.55
USP48-211ENST00000526044 PUS7LQ9H0K6 701 aaKnown RBP5.39□□□□□ -1.55
USP48-211ENST00000526044 TMX4Q9H1E5 349 aaPredicted RBP5.39□□□□□ -1.55
USP48-211ENST00000526044 DCTPP1Q9H773 170 aa5.39□□□□□ -1.55
USP48-211ENST00000526044 IL23AQ9NPF7 189 aa5.39□□□□□ -1.55
USP48-211ENST00000526044 CNNM1Q9NRU3 951 aa5.39□□□□□ -1.55
USP48-211ENST00000526044 EDARQ9UNE0 448 aa5.39□□□□□ -1.55
USP48-211ENST00000526044 NRXN2Q9P2S2 1712 aa5.39□□□□□ -1.55
USP48-211ENST00000526044 LAMB2P55268 1798 aa5.39□□□□□ -1.55
USP48-211ENST00000526044 TAF1P21675 1872 aa5.39□□□□□ -1.55
USP48-211ENST00000526044 A0A0G2JLW4 131 aa5.38□□□□□ -1.55
USP48-211ENST00000526044 C1QTNF3-AMACRE9PGA6 284 aa5.38□□□□□ -1.55
USP48-211ENST00000526044 K7ESF4 209 aa5.38□□□□□ -1.55
USP48-211ENST00000526044 EYA2O00167 538 aa5.38□□□□□ -1.55
USP48-211ENST00000526044 MTHFD2P13995 350 aa5.38□□□□□ -1.55
USP48-211ENST00000526044 RFX5P48382 616 aaPredicted RBP5.38□□□□□ -1.55
USP48-211ENST00000526044 NPEPPSP55786 919 aa5.38□□□□□ -1.55
USP48-211ENST00000526044 HHEXQ03014 270 aa5.38□□□□□ -1.55
USP48-211ENST00000526044 GRAPQ13588 217 aa5.38□□□□□ -1.55
USP48-211ENST00000526044 CRY2Q49AN0 593 aa5.38□□□□□ -1.55
USP48-211ENST00000526044 ANKRD45Q5TZF3 282 aa5.38□□□□□ -1.55
USP48-211ENST00000526044 FAM111BQ6SJ93 734 aa5.38□□□□□ -1.55
USP48-211ENST00000526044 Q6ZSN1 163 aa5.38□□□□□ -1.55
USP48-211ENST00000526044 D2HGDHQ8N465 521 aa5.38□□□□□ -1.55
USP48-211ENST00000526044 KLHDC4Q8TBB5 520 aa5.38□□□□□ -1.55
USP48-211ENST00000526044 GRAPLQ8TC17 118 aaPredicted RBP5.38□□□□□ -1.55
USP48-211ENST00000526044 EDAQ92838 391 aa5.38□□□□□ -1.55
USP48-211ENST00000526044 KRTAP3-1Q9BYR8 98 aa5.38□□□□□ -1.55
USP48-211ENST00000526044 SIL1Q9H173 461 aa5.38□□□□□ -1.55
USP48-211ENST00000526044 ING3Q9NXR8 418 aa5.38□□□□□ -1.55
USP48-211ENST00000526044 NCDNQ9UBB6 729 aa5.38□□□□□ -1.55
USP48-211ENST00000526044 DPP7Q9UHL4 492 aa5.38□□□□□ -1.55
USP48-211ENST00000526044 PA2G4Q9UQ80 394 aaKnown RBP5.38□□□□□ -1.55
USP48-211ENST00000526044 NOP58Q9Y2X3 529 aaKnown RBP5.38□□□□□ -1.55
USP48-211ENST00000526044 RIPOR2Q9Y4F9 1068 aa5.38□□□□□ -1.55
USP48-211ENST00000526044 RTL9Q8NET4 1388 aa5.38□□□□□ -1.55
USP48-211ENST00000526044 ABCC12Q96J65 1359 aa5.38□□□□□ -1.55
USP48-211ENST00000526044 ANKRD31Q8N7Z5 1873 aa5.37□□□□□ -1.55
USP48-211ENST00000526044 LOC102724159A0A0B4J2E5 919 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms