RNA–Protein interactions for RNA: ENST00000525990.1

SSBP3-210, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 2

Gene SSBP3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-210ENST00000525990 CACNA1HO95180 2353 aa13.06□□□□□ -0.32
SSBP3-210ENST00000525990 MYO15AQ9UKN7 3530 aa13.05□□□□□ -0.32
SSBP3-210ENST00000525990 USP34Q70CQ2 3546 aa13.05□□□□□ -0.32
SSBP3-210ENST00000525990 MTMR11A4FU01 709 aa13.05□□□□□ -0.32
SSBP3-210ENST00000525990 XPOTO43592 962 aaKnown RBP13.05□□□□□ -0.32
SSBP3-210ENST00000525990 ODC1P11926 461 aa13.05□□□□□ -0.32
SSBP3-210ENST00000525990 MYL4P12829 197 aa13.05□□□□□ -0.32
SSBP3-210ENST00000525990 GAP43P17677 238 aa13.05□□□□□ -0.32
SSBP3-210ENST00000525990 GRM2Q14416 872 aa13.05□□□□□ -0.32
SSBP3-210ENST00000525990 FAM78AQ5JUQ0 283 aa13.05□□□□□ -0.32
SSBP3-210ENST00000525990 SLFN12LQ6IEE8 588 aa13.05□□□□□ -0.32
SSBP3-210ENST00000525990 MTSS1LQ765P7 747 aa13.05□□□□□ -0.32
SSBP3-210ENST00000525990 RTL10Q7L3V2 364 aa13.05□□□□□ -0.32
SSBP3-210ENST00000525990 USP37Q86T82 979 aa13.05□□□□□ -0.32
SSBP3-210ENST00000525990 GPIHBP1Q8IV16 184 aa13.05□□□□□ -0.32
SSBP3-210ENST00000525990 DTWD2Q8NBA8 298 aa13.05□□□□□ -0.32
SSBP3-210ENST00000525990 NOC3LQ8WTT2 800 aaKnown RBP13.05□□□□□ -0.32
SSBP3-210ENST00000525990 BORCS6Q96GS4 357 aa13.05□□□□□ -0.32
SSBP3-210ENST00000525990 ACCSQ96QU6 501 aa13.05□□□□□ -0.32
SSBP3-210ENST00000525990 PYM1Q9BRP8 204 aaKnown RBP13.05□□□□□ -0.32
SSBP3-210ENST00000525990 LRRC3Q9BY71 257 aa13.05□□□□□ -0.32
SSBP3-210ENST00000525990 ZNF334Q9HCZ1 680 aaPredicted RBP13.05□□□□□ -0.32
SSBP3-210ENST00000525990 AVENQ9NQS1 362 aaPredicted RBP13.05□□□□□ -0.32
SSBP3-210ENST00000525990 OLFML3Q9NRN5 406 aa13.05□□□□□ -0.32
SSBP3-210ENST00000525990 DPP3Q9NY33 737 aa13.05□□□□□ -0.32
SSBP3-210ENST00000525990 DLGAP2Q9P1A6 1054 aa13.05□□□□□ -0.32
SSBP3-210ENST00000525990 C2CD2Q9Y426 696 aa13.05□□□□□ -0.32
SSBP3-210ENST00000525990 MTF2Q9Y483 593 aaPredicted RBP13.05□□□□□ -0.32
SSBP3-210ENST00000525990 GREB1Q4ZG55 1949 aa13.05□□□□□ -0.32
SSBP3-210ENST00000525990 PTPRDP23468 1912 aa13.04□□□□□ -0.32
SSBP3-210ENST00000525990 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.04□□□□□ -0.32
SSBP3-210ENST00000525990 CYB561D2O14569 222 aa13.04□□□□□ -0.32
SSBP3-210ENST00000525990 TYMPP19971 482 aa13.04□□□□□ -0.32
SSBP3-210ENST00000525990 RFX1P22670 979 aa13.04□□□□□ -0.32
SSBP3-210ENST00000525990 HOXD13P35453 343 aa13.04□□□□□ -0.32
SSBP3-210ENST00000525990 GPR17Q13304 367 aa13.04□□□□□ -0.32
SSBP3-210ENST00000525990 ANGPT1Q15389 498 aa13.04□□□□□ -0.32
SSBP3-210ENST00000525990 TEAD2Q15562 447 aa13.04□□□□□ -0.32
SSBP3-210ENST00000525990 CCDC142Q17RM4 750 aa13.04□□□□□ -0.32
SSBP3-210ENST00000525990 STXBP5Q5T5C0 1151 aa13.04□□□□□ -0.32
SSBP3-210ENST00000525990 WSCD1Q658N2 575 aa13.04□□□□□ -0.32
SSBP3-210ENST00000525990 LMBRD2Q68DH5 695 aaPredicted RBP13.04□□□□□ -0.32
SSBP3-210ENST00000525990 PDZD4Q76G19 769 aaPredicted RBP13.04□□□□□ -0.32
SSBP3-210ENST00000525990 ASCL5Q7RTU5 278 aa13.04□□□□□ -0.32
SSBP3-210ENST00000525990 FRMD5Q7Z6J6 570 aa13.04□□□□□ -0.32
SSBP3-210ENST00000525990 TMC8Q8IU68 726 aa13.04□□□□□ -0.32
SSBP3-210ENST00000525990 CD302Q8IX05 232 aa13.04□□□□□ -0.32
SSBP3-210ENST00000525990 SHKBP1Q8TBC3 707 aa13.04□□□□□ -0.32
SSBP3-210ENST00000525990 DHX58Q96C10 678 aa13.04□□□□□ -0.32
SSBP3-210ENST00000525990 ASB7Q9H672 318 aa13.04□□□□□ -0.32
SSBP3-210ENST00000525990 DERAQ9Y315 318 aa13.04□□□□□ -0.32
SSBP3-210ENST00000525990 PTPRJQ12913 1337 aa13.04□□□□□ -0.32
SSBP3-210ENST00000525990 CACNA1IQ9P0X4 2223 aa13.04□□□□□ -0.32
SSBP3-210ENST00000525990 ANAPC1Q9H1A4 1944 aa13.03□□□□□ -0.32
SSBP3-210ENST00000525990 PIEZO1Q92508 2521 aa13.03□□□□□ -0.32
SSBP3-210ENST00000525990 OR6C75A6NL08 312 aa13.03□□□□□ -0.32
SSBP3-210ENST00000525990 SHISA7A6NL88 538 aa13.03□□□□□ -0.32
SSBP3-210ENST00000525990 HCRTO43612 131 aa13.03□□□□□ -0.32
SSBP3-210ENST00000525990 GFRA3O60609 400 aa13.03□□□□□ -0.32
SSBP3-210ENST00000525990 PPP6R2O75170 966 aa13.03□□□□□ -0.32
SSBP3-210ENST00000525990 F13A1P00488 732 aa13.03□□□□□ -0.32
SSBP3-210ENST00000525990 ITGB3P05106 788 aa13.03□□□□□ -0.32
SSBP3-210ENST00000525990 ZSCAN22P10073 491 aaPredicted RBP13.03□□□□□ -0.32
SSBP3-210ENST00000525990 POLR2BP30876 1174 aaKnown RBP13.03□□□□□ -0.32
SSBP3-210ENST00000525990 ABCD1P33897 745 aa13.03□□□□□ -0.32
SSBP3-210ENST00000525990 VIPR2P41587 438 aa13.03□□□□□ -0.32
SSBP3-210ENST00000525990 TAF6P49848 677 aa13.03□□□□□ -0.32
SSBP3-210ENST00000525990 NUBP1P53384 320 aa13.03□□□□□ -0.32
SSBP3-210ENST00000525990 EPHA5P54756 1037 aa13.03□□□□□ -0.32
SSBP3-210ENST00000525990 TFAMQ00059 246 aaKnown RBP13.03□□□□□ -0.32
SSBP3-210ENST00000525990 MLF2Q15773 248 aaPredicted RBP13.03□□□□□ -0.32
SSBP3-210ENST00000525990 SLC39A12Q504Y0 691 aa13.03□□□□□ -0.32
SSBP3-210ENST00000525990 CENPPQ6IPU0 288 aa13.03□□□□□ -0.32
SSBP3-210ENST00000525990 LRRTM3Q86VH5 581 aa13.03□□□□□ -0.32
SSBP3-210ENST00000525990 HSCBQ8IWL3 235 aa13.03□□□□□ -0.32
SSBP3-210ENST00000525990 BRSK2Q8IWQ3 736 aa13.03□□□□□ -0.32
SSBP3-210ENST00000525990 SYCP3Q8IZU3 236 aa13.03□□□□□ -0.32
SSBP3-210ENST00000525990 C1orf127Q8N9H9 656 aa13.03□□□□□ -0.32
SSBP3-210ENST00000525990 STKLD1Q8NE28 680 aa13.03□□□□□ -0.32
SSBP3-210ENST00000525990 PJA1Q8NG27 643 aa13.03□□□□□ -0.32
SSBP3-210ENST00000525990 RSPRY1Q96DX4 576 aa13.03□□□□□ -0.32
SSBP3-210ENST00000525990 ZNF512Q96ME7 567 aaPredicted RBP13.03□□□□□ -0.32
SSBP3-210ENST00000525990 ZNF396Q96N95 335 aaPredicted RBP13.03□□□□□ -0.32
SSBP3-210ENST00000525990 ASB16Q96NS5 453 aa13.03□□□□□ -0.32
SSBP3-210ENST00000525990 TSPAN18Q96SJ8 248 aa13.03□□□□□ -0.32
SSBP3-210ENST00000525990 LPIN3Q9BQK8 851 aa13.03□□□□□ -0.32
SSBP3-210ENST00000525990 TRIM9Q9C026 710 aa13.03□□□□□ -0.32
SSBP3-210ENST00000525990 PDE11AQ9HCR9 933 aa13.03□□□□□ -0.32
SSBP3-210ENST00000525990 HEBP1Q9NRV9 189 aa13.03□□□□□ -0.32
SSBP3-210ENST00000525990 KBTBD4Q9NVX7 518 aa13.03□□□□□ -0.32
SSBP3-210ENST00000525990 GDE1Q9NZC3 331 aa13.03□□□□□ -0.32
SSBP3-210ENST00000525990 A0A1W2PRU2 124 aa13.02□□□□□ -0.33
SSBP3-210ENST00000525990 CUTAO60888 179 aa13.02□□□□□ -0.33
SSBP3-210ENST00000525990 ECI2O75521 394 aa13.02□□□□□ -0.33
SSBP3-210ENST00000525990 YEATS4O95619 227 aa13.02□□□□□ -0.33
SSBP3-210ENST00000525990 CYP11A1P05108 521 aa13.02□□□□□ -0.33
SSBP3-210ENST00000525990 ATF6P18850 670 aa13.02□□□□□ -0.33
SSBP3-210ENST00000525990 STARD6P59095 220 aa13.02□□□□□ -0.33
SSBP3-210ENST00000525990 MYBPC2Q14324 1141 aa13.02□□□□□ -0.33
SSBP3-210ENST00000525990 SLC44A4Q53GD3 710 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms