RNA–Protein interactions for RNA: ENST00000525962.5

TGFBR3-207, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 3,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-207ENST00000525962 FAM102AQ5T9C2 384 aaPredicted RBP7.31□□□□□ -1.24
TGFBR3-207ENST00000525962 PRPF39Q86UA1 669 aaKnown RBP7.31□□□□□ -1.24
TGFBR3-207ENST00000525962 ECHDC2Q86YB7 292 aa7.31□□□□□ -1.24
TGFBR3-207ENST00000525962 CERS5Q8N5B7 392 aa7.31□□□□□ -1.24
TGFBR3-207ENST00000525962 DCAF4Q8WV16 495 aa7.31□□□□□ -1.24
TGFBR3-207ENST00000525962 PRPF31Q8WWY3 499 aaKnown RBP7.31□□□□□ -1.24
TGFBR3-207ENST00000525962 SH3GL3Q99963 347 aa7.31□□□□□ -1.24
TGFBR3-207ENST00000525962 NDE1Q9NXR1 346 aa7.31□□□□□ -1.24
TGFBR3-207ENST00000525962 AGO2Q9UKV8 859 aaKnown RBP7.31□□□□□ -1.24
TGFBR3-207ENST00000525962 MYH2Q9UKX2 1941 aa7.31□□□□□ -1.24
TGFBR3-207ENST00000525962 GOLGA4Q13439 2230 aaKnown RBP7.31□□□□□ -1.24
TGFBR3-207ENST00000525962 CHD2O14647 1828 aaKnown RBP7.31□□□□□ -1.24
TGFBR3-207ENST00000525962 CRYBG1Q9Y4K1 1723 aa7.31□□□□□ -1.24
TGFBR3-207ENST00000525962 TRIM49D1C9J1S8 452 aa7.31□□□□□ -1.24
TGFBR3-207ENST00000525962 DDX3YO15523 660 aaKnown RBP7.31□□□□□ -1.24
TGFBR3-207ENST00000525962 KCNN4O15554 427 aa7.31□□□□□ -1.24
TGFBR3-207ENST00000525962 ASAP2O43150 1006 aa7.31□□□□□ -1.24
TGFBR3-207ENST00000525962 USP1O94782 785 aa7.31□□□□□ -1.24
TGFBR3-207ENST00000525962 SEC24DO94855 1032 aaPredicted RBP7.31□□□□□ -1.24
TGFBR3-207ENST00000525962 SLC4A1P02730 911 aa7.31□□□□□ -1.24
TGFBR3-207ENST00000525962 CASP2P42575 452 aa7.31□□□□□ -1.24
TGFBR3-207ENST00000525962 RPL7AP62424 266 aaKnown RBP7.31□□□□□ -1.24
TGFBR3-207ENST00000525962 CUL3Q13618 768 aa7.31□□□□□ -1.24
TGFBR3-207ENST00000525962 BAATQ14032 418 aaPredicted RBP7.31□□□□□ -1.24
TGFBR3-207ENST00000525962 ITIH4Q14624 930 aa7.31□□□□□ -1.24
TGFBR3-207ENST00000525962 CHI3L2Q15782 390 aa7.31□□□□□ -1.24
TGFBR3-207ENST00000525962 ZCWPW2Q504Y3 356 aa7.31□□□□□ -1.24
TGFBR3-207ENST00000525962 LRRC71Q8N4P6 559 aa7.31□□□□□ -1.24
TGFBR3-207ENST00000525962 EPS8L1Q8TE68 723 aa7.31□□□□□ -1.24
TGFBR3-207ENST00000525962 SEMA4DQ92854 862 aa7.31□□□□□ -1.24
TGFBR3-207ENST00000525962 EXT2Q93063 718 aa7.31□□□□□ -1.24
TGFBR3-207ENST00000525962 MTBPQ96DY7 904 aa7.31□□□□□ -1.24
TGFBR3-207ENST00000525962 SERPINB12Q96P63 405 aa7.31□□□□□ -1.24
TGFBR3-207ENST00000525962 TRIM56Q9BRZ2 755 aaKnown RBP7.31□□□□□ -1.24
TGFBR3-207ENST00000525962 WDR18Q9BV38 432 aa7.31□□□□□ -1.24
TGFBR3-207ENST00000525962 MECRQ9BV79 373 aa7.31□□□□□ -1.24
TGFBR3-207ENST00000525962 MANSC1Q9H8J5 431 aa7.31□□□□□ -1.24
TGFBR3-207ENST00000525962 ZNF277Q9NRM2 450 aaPredicted RBP7.31□□□□□ -1.24
TGFBR3-207ENST00000525962 IVNS1ABPQ9Y6Y0 642 aa7.31□□□□□ -1.24
TGFBR3-207ENST00000525962 MON2Q7Z3U7 1717 aa7.3□□□□□ -1.24
TGFBR3-207ENST00000525962 AIM2O14862 343 aa7.3□□□□□ -1.24
TGFBR3-207ENST00000525962 NOL3O60936 208 aaKnown RBP7.3□□□□□ -1.24
TGFBR3-207ENST00000525962 AVILO75366 819 aa7.3□□□□□ -1.24
TGFBR3-207ENST00000525962 GPC4O75487 556 aa7.3□□□□□ -1.24
TGFBR3-207ENST00000525962 MT-CO1P00395 513 aa7.3□□□□□ -1.24
TGFBR3-207ENST00000525962 ADRB2P07550 413 aa7.3□□□□□ -1.24
TGFBR3-207ENST00000525962 RAP1GAPP47736 663 aa7.3□□□□□ -1.24
TGFBR3-207ENST00000525962 PTDSS1P48651 473 aaKnown RBP7.3□□□□□ -1.24
TGFBR3-207ENST00000525962 DBN1Q16643 649 aa7.3□□□□□ -1.24
TGFBR3-207ENST00000525962 ACAD10Q6JQN1 1059 aa7.3□□□□□ -1.24
TGFBR3-207ENST00000525962 GPAT2Q6NUI2 795 aa7.3□□□□□ -1.24
TGFBR3-207ENST00000525962 OTOP1Q7RTM1 612 aa7.3□□□□□ -1.24
TGFBR3-207ENST00000525962 AMIGO3Q86WK7 504 aa7.3□□□□□ -1.24
TGFBR3-207ENST00000525962 NCAPG2Q86XI2 1143 aa7.3□□□□□ -1.24
TGFBR3-207ENST00000525962 TRIM50Q86XT4 487 aa7.3□□□□□ -1.24
TGFBR3-207ENST00000525962 RNF135Q8IUD6 432 aa7.3□□□□□ -1.24
TGFBR3-207ENST00000525962 TRIML2Q8N7C3 387 aa7.3□□□□□ -1.24
TGFBR3-207ENST00000525962 SPATA18Q8TC71 538 aa7.3□□□□□ -1.24
TGFBR3-207ENST00000525962 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.3□□□□□ -1.249e-7■■■■■ 54.9
TGFBR3-207ENST00000525962 PGM2Q96G03 612 aa7.3□□□□□ -1.24
TGFBR3-207ENST00000525962 NKX1-2Q9UD57 310 aaPredicted RBP7.3□□□□□ -1.24
TGFBR3-207ENST00000525962 GTF3C4Q9UKN8 822 aa7.3□□□□□ -1.24
TGFBR3-207ENST00000525962 ANGPTL2Q9UKU9 493 aa7.3□□□□□ -1.24
TGFBR3-207ENST00000525962 MYH13Q9UKX3 1938 aa7.3□□□□□ -1.24
TGFBR3-207ENST00000525962 RPTORQ8N122 1335 aa7.3□□□□□ -1.24
TGFBR3-207ENST00000525962 GOLGA8QA0A0J9YX86 632 aa7.3□□□□□ -1.24
TGFBR3-207ENST00000525962 IQANK1A0A1B0GTG1 560 aa7.3□□□□□ -1.24
TGFBR3-207ENST00000525962 FAM237BA0A1B0GVD1 139 aa7.3□□□□□ -1.24
TGFBR3-207ENST00000525962 GOLGA8OA6NCC3 632 aa7.3□□□□□ -1.24
TGFBR3-207ENST00000525962 GOLGA8NF8WBI6 632 aa7.3□□□□□ -1.24
TGFBR3-207ENST00000525962 PPP1R12AO14974 1030 aaPredicted RBP7.3□□□□□ -1.24
TGFBR3-207ENST00000525962 MMP13P45452 471 aa7.3□□□□□ -1.24
TGFBR3-207ENST00000525962 TAS2R40P59535 323 aa7.3□□□□□ -1.24
TGFBR3-207ENST00000525962 SLC12A1Q13621 1099 aa7.3□□□□□ -1.24
TGFBR3-207ENST00000525962 RPS6KA2Q15349 733 aa7.3□□□□□ -1.24
TGFBR3-207ENST00000525962 CCDC14Q49A88 953 aa7.3□□□□□ -1.24
TGFBR3-207ENST00000525962 C16orf46Q6P387 395 aa7.3□□□□□ -1.24
TGFBR3-207ENST00000525962 IYDQ6PHW0 289 aa7.3□□□□□ -1.24
TGFBR3-207ENST00000525962 CES3Q6UWW8 571 aa7.3□□□□□ -1.24
TGFBR3-207ENST00000525962 POLNQ7Z5Q5 900 aa7.3□□□□□ -1.24
TGFBR3-207ENST00000525962 ST13P4Q8IZP2 240 aaPredicted RBP7.3□□□□□ -1.24
TGFBR3-207ENST00000525962 NDUFAF2Q8N183 169 aa7.3□□□□□ -1.24
TGFBR3-207ENST00000525962 CCNYL1Q8N7R7 359 aa7.3□□□□□ -1.24
TGFBR3-207ENST00000525962 RNF169Q8NCN4 708 aa7.3□□□□□ -1.24
TGFBR3-207ENST00000525962 ACTL9Q8TC94 416 aa7.3□□□□□ -1.24
TGFBR3-207ENST00000525962 SCG3Q8WXD2 468 aaKnown RBP7.3□□□□□ -1.24
TGFBR3-207ENST00000525962 UBE4BO95155 1302 aa7.3□□□□□ -1.24
TGFBR3-207ENST00000525962 PRPSAP2O60256 369 aa7.3□□□□□ -1.24
TGFBR3-207ENST00000525962 CRCPO75575 148 aa7.3□□□□□ -1.24
TGFBR3-207ENST00000525962 DNAJC8O75937 253 aaPredicted RBP7.3□□□□□ -1.24
TGFBR3-207ENST00000525962 KRT37O76014 449 aa7.3□□□□□ -1.24
TGFBR3-207ENST00000525962 F7P08709 466 aaPredicted RBP7.3□□□□□ -1.24
TGFBR3-207ENST00000525962 SETSIPP0DME0 302 aa7.3□□□□□ -1.24
TGFBR3-207ENST00000525962 KRT3P12035 628 aa7.3□□□□□ -1.24
TGFBR3-207ENST00000525962 VCAM1P19320 739 aa7.3□□□□□ -1.24
TGFBR3-207ENST00000525962 ALDH1B1P30837 517 aa7.3□□□□□ -1.24
TGFBR3-207ENST00000525962 SLC12A2P55011 1212 aa7.3□□□□□ -1.24
TGFBR3-207ENST00000525962 SLC8A3P57103 927 aa7.3□□□□□ -1.24
TGFBR3-207ENST00000525962 OTUD4Q01804 1114 aaKnown RBP7.3□□□□□ -1.24
TGFBR3-207ENST00000525962 ALCAMQ13740 583 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms