RNA–Protein interactions for RNA: ENST00000525948.5

PUM1-215, Transcript of pumilio RNA binding family member 1, human

TSL 3

Gene PUM1, Length 1,103 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUM1-215	ENST00000525948	C4orf47	A7E2U8	309 aa		11.2	□□□□□ -0.62
PUM1-215	ENST00000525948	SOBP	A7XYQ1	873 aa		11.2	□□□□□ -0.62
PUM1-215	ENST00000525948	ACKR2	O00590	384 aa		11.2	□□□□□ -0.62
PUM1-215	ENST00000525948	PODXL	O00592	558 aa		11.2	□□□□□ -0.62
PUM1-215	ENST00000525948	SYN3	O14994	580 aa		11.2	□□□□□ -0.62
PUM1-215	ENST00000525948	MAP3K7	O43318	606 aa		11.2	□□□□□ -0.62
PUM1-215	ENST00000525948	EVC	P57679	992 aa		11.2	□□□□□ -0.62
PUM1-215	ENST00000525948	TNK2	Q07912	1038 aa		11.2	□□□□□ -0.62
PUM1-215	ENST00000525948	TOB2	Q14106	344 aa	Predicted RBP	11.2	□□□□□ -0.62
PUM1-215	ENST00000525948	MRPL58	Q14197	206 aa	Known RBP	11.2	□□□□□ -0.62
PUM1-215	ENST00000525948	MAPK6	Q16659	721 aa		11.2	□□□□□ -0.62
PUM1-215	ENST00000525948	DCAF4L1	Q3SXM0	396 aa		11.2	□□□□□ -0.62
PUM1-215	ENST00000525948	PLK5	Q496M5	336 aa		11.2	□□□□□ -0.62
PUM1-215	ENST00000525948	CTXN3	Q4LDR2	81 aa		11.2	□□□□□ -0.62
PUM1-215	ENST00000525948	SH3PXD2A	Q5TCZ1	1133 aa		11.2	□□□□□ -0.62
PUM1-215	ENST00000525948	TPGS2	Q68CL5	300 aa		11.2	□□□□□ -0.62
PUM1-215	ENST00000525948	SKAP1	Q86WV1	359 aa		11.2	□□□□□ -0.62
PUM1-215	ENST00000525948	SLFN12	Q8IYM2	578 aa		11.2	□□□□□ -0.62
PUM1-215	ENST00000525948	LEMD2	Q8NC56	503 aa		11.2	□□□□□ -0.62
PUM1-215	ENST00000525948	ZCCHC14	Q8WYQ9	949 aa	Known RBP	11.2	□□□□□ -0.62
PUM1-215	ENST00000525948	E2F7	Q96AV8	911 aa		11.2	□□□□□ -0.62
PUM1-215	ENST00000525948	MKNK1	Q9BUB5	465 aa		11.2	□□□□□ -0.62
PUM1-215	ENST00000525948	KIFC3	Q9BVG8	833 aa		11.2	□□□□□ -0.62
PUM1-215	ENST00000525948	SCNM1	Q9BWG6	230 aa		11.2	□□□□□ -0.62
PUM1-215	ENST00000525948	LRRC3	Q9BY71	257 aa		11.2	□□□□□ -0.62
PUM1-215	ENST00000525948	DNAJC25	Q9H1X3	360 aa		11.2	□□□□□ -0.62
PUM1-215	ENST00000525948	C2orf40	Q9H1Z8	148 aa		11.2	□□□□□ -0.62
PUM1-215	ENST00000525948	GJB4	Q9NTQ9	266 aa		11.2	□□□□□ -0.62
PUM1-215	ENST00000525948	POLR3B	Q9NW08	1133 aa	Predicted RBP	11.2	□□□□□ -0.62
PUM1-215	ENST00000525948	AFF4	Q9UHB7	1163 aa	Known RBP	11.2	□□□□□ -0.62
PUM1-215	ENST00000525948	VPS9D1	Q9Y2B5	631 aa		11.2	□□□□□ -0.62
PUM1-215	ENST00000525948	TNRC6B	Q9UPQ9	1833 aa	Known RBP	11.2	□□□□□ -0.62
PUM1-215	ENST00000525948	ITPR1	Q14643	2758 aa		11.2	□□□□□ -0.62
PUM1-215	ENST00000525948	ADAMTS20	P59510	1910 aa		11.19	□□□□□ -0.62
PUM1-215	ENST00000525948	GCN1	Q92616	2671 aa	Known RBP	11.19	□□□□□ -0.62
PUM1-215	ENST00000525948	CCDC163	A0A0D9SF12	145 aa		11.19	□□□□□ -0.62
PUM1-215	ENST00000525948	SMIM28	A0A1B0GU29	152 aa		11.19	□□□□□ -0.62
PUM1-215	ENST00000525948	LNP1	A1A4G5	178 aa		11.19	□□□□□ -0.62
PUM1-215	ENST00000525948		H7C4K7	107 aa		11.19	□□□□□ -0.62
PUM1-215	ENST00000525948	VNN2	O95498	520 aa		11.19	□□□□□ -0.62
PUM1-215	ENST00000525948	PRAMEF12	O95522	483 aa		11.19	□□□□□ -0.62
PUM1-215	ENST00000525948	CPB1	P15086	417 aa		11.19	□□□□□ -0.62
PUM1-215	ENST00000525948	BMP2KL	Q5H9B9	411 aa		11.19	□□□□□ -0.62
PUM1-215	ENST00000525948	ZNF280D	Q6N043	979 aa		11.19	□□□□□ -0.62
PUM1-215	ENST00000525948	LRSAM1	Q6UWE0	723 aa		11.19	□□□□□ -0.62
PUM1-215	ENST00000525948	RNF19B	Q6ZMZ0	732 aa		11.19	□□□□□ -0.62
PUM1-215	ENST00000525948	FAM177A1	Q8N128	213 aa	Predicted RBP	11.19	□□□□□ -0.62
PUM1-215	ENST00000525948	SYNPO	Q8N3V7	929 aa		11.19	□□□□□ -0.62
PUM1-215	ENST00000525948	MCPH1	Q8NEM0	835 aa		11.19	□□□□□ -0.62
PUM1-215	ENST00000525948	RNF166	Q96A37	237 aa	Predicted RBP	11.19	□□□□□ -0.62
PUM1-215	ENST00000525948	ZC3H10	Q96K80	434 aa	Known RBP	11.19	□□□□□ -0.62
PUM1-215	ENST00000525948	ZMAT2	Q96NC0	199 aa	Known RBP	11.19	□□□□□ -0.62
PUM1-215	ENST00000525948	DUSP15	Q9H1R2	295 aa	Predicted RBP	11.19	□□□□□ -0.62
PUM1-215	ENST00000525948	CRISPLD1	Q9H336	500 aa		11.19	□□□□□ -0.62
PUM1-215	ENST00000525948	PTPRD	P23468	1912 aa		11.19	□□□□□ -0.62
PUM1-215	ENST00000525948	SETX	Q7Z333	2677 aa	Known RBP	11.19	□□□□□ -0.62
PUM1-215	ENST00000525948	FREM2	Q5SZK8	3169 aa		11.18	□□□□□ -0.62
PUM1-215	ENST00000525948	CACNA1E	Q15878	2313 aa		11.18	□□□□□ -0.62
PUM1-215	ENST00000525948	CPLX1	O14810	134 aa		11.18	□□□□□ -0.62
PUM1-215	ENST00000525948	DTNB	O60941	627 aa		11.18	□□□□□ -0.62
PUM1-215	ENST00000525948	AKAP3	O75969	853 aa		11.18	□□□□□ -0.62
PUM1-215	ENST00000525948	BAG4	O95429	457 aa	Known RBP	11.18	□□□□□ -0.62
PUM1-215	ENST00000525948	ATP2B1	P20020	1258 aa		11.18	□□□□□ -0.62
PUM1-215	ENST00000525948	HSPA4	P34932	840 aa		11.18	□□□□□ -0.62
PUM1-215	ENST00000525948	CREB5	Q02930	508 aa		11.18	□□□□□ -0.62
PUM1-215	ENST00000525948	STK3	Q13188	491 aa		11.18	□□□□□ -0.62
PUM1-215	ENST00000525948	ARHGAP29	Q52LW3	1261 aa		11.18	□□□□□ -0.62
PUM1-215	ENST00000525948	NT5DC1	Q5TFE4	455 aa		11.18	□□□□□ -0.62
PUM1-215	ENST00000525948	ATF7IP2	Q5U623	682 aa		11.18	□□□□□ -0.62
PUM1-215	ENST00000525948	KIAA1211L	Q6NV74	962 aa		11.18	□□□□□ -0.62
PUM1-215	ENST00000525948	ARID3B	Q8IVW6	561 aa	Predicted RBP	11.18	□□□□□ -0.62
PUM1-215	ENST00000525948	TMEM130	Q8N3G9	435 aa		11.18	□□□□□ -0.62
PUM1-215	ENST00000525948	CHFR	Q96EP1	664 aa		11.18	□□□□□ -0.62
PUM1-215	ENST00000525948	PGLYRP2	Q96PD5	576 aa		11.18	□□□□□ -0.62
PUM1-215	ENST00000525948	HHIP	Q96QV1	700 aa		11.18	□□□□□ -0.62
PUM1-215	ENST00000525948	NAP1L4	Q99733	375 aa	Known RBP	11.18	□□□□□ -0.62
PUM1-215	ENST00000525948	GPR88	Q9GZN0	384 aa		11.18	□□□□□ -0.62
PUM1-215	ENST00000525948	WNT7A	O00755	349 aa		11.17	□□□□□ -0.62
PUM1-215	ENST00000525948	DCLK1	O15075	740 aa		11.17	□□□□□ -0.62
PUM1-215	ENST00000525948	OR4Q2	P0C623	313 aa		11.17	□□□□□ -0.62
PUM1-215	ENST00000525948	MCM4	P33991	863 aa		11.17	□□□□□ -0.62
PUM1-215	ENST00000525948	NAMPT	P43490	491 aa		11.17	□□□□□ -0.62
PUM1-215	ENST00000525948	OSTN	P61366	133 aa		11.17	□□□□□ -0.62
PUM1-215	ENST00000525948	CALCRL	Q16602	461 aa		11.17	□□□□□ -0.62
PUM1-215	ENST00000525948	XKR4	Q5GH76	650 aa		11.17	□□□□□ -0.62
PUM1-215	ENST00000525948	DAB2IP	Q5VWQ8	1189 aa		11.17	□□□□□ -0.62
PUM1-215	ENST00000525948	FSTL4	Q6MZW2	842 aa		11.17	□□□□□ -0.62
PUM1-215	ENST00000525948	ALKAL1	Q6UXT8	129 aa		11.17	□□□□□ -0.62
PUM1-215	ENST00000525948	GAREM2	Q75VX8	874 aa		11.17	□□□□□ -0.62
PUM1-215	ENST00000525948	DEPTOR	Q8TB45	409 aa		11.17	□□□□□ -0.62
PUM1-215	ENST00000525948	C18orf25	Q96B23	403 aa	Predicted RBP	11.17	□□□□□ -0.62
PUM1-215	ENST00000525948	SUSD3	Q96L08	255 aa		11.17	□□□□□ -0.62
PUM1-215	ENST00000525948	TMEM209	Q96SK2	561 aa		11.17	□□□□□ -0.62
PUM1-215	ENST00000525948	CDT1	Q9H211	546 aa		11.17	□□□□□ -0.62
PUM1-215	ENST00000525948	TTC12	Q9H892	705 aa	Predicted RBP	11.17	□□□□□ -0.62
PUM1-215	ENST00000525948	PCDHA12	Q9UN75	941 aa		11.17	□□□□□ -0.62
PUM1-215	ENST00000525948	SLC8A2	Q9UPR5	921 aa		11.17	□□□□□ -0.62
PUM1-215	ENST00000525948	NUB1	Q9Y5A7	615 aa		11.17	□□□□□ -0.62
PUM1-215	ENST00000525948	CELSR3	Q9NYQ7	3312 aa		11.17	□□□□□ -0.62
PUM1-215	ENST00000525948	BCLAF3	A2AJT9	711 aa	Known RBP	11.16	□□□□□ -0.62

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