RNA–Protein interactions for RNA: ENST00000525503.5

CCDC90B-203, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,919 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-203ENST00000525503 PRRT2Q7Z6L0 340 aaPredicted RBP17.51■□□□□ 0.39
CCDC90B-203ENST00000525503 CPLX4Q7Z7G2 160 aa17.51■□□□□ 0.39
CCDC90B-203ENST00000525503 RNF149Q8NC42 400 aa17.51■□□□□ 0.39
CCDC90B-203ENST00000525503 FAM212AQ96EL1 285 aa17.51■□□□□ 0.39
CCDC90B-203ENST00000525503 CHMP6Q96FZ7 201 aa17.51■□□□□ 0.39
CCDC90B-203ENST00000525503 SERPINB12Q96P63 405 aa17.51■□□□□ 0.39
CCDC90B-203ENST00000525503 DDX20Q9UHI6 824 aaKnown RBP17.51■□□□□ 0.39
CCDC90B-203ENST00000525503 CPSF3Q9UKF6 684 aaKnown RBP17.51■□□□□ 0.39
CCDC90B-203ENST00000525503 IGKV6-21A0A0C4DH24 114 aa17.5■□□□□ 0.39
CCDC90B-203ENST00000525503 TTLL13PA6NNM8 815 aa17.5■□□□□ 0.39
CCDC90B-203ENST00000525503 MARK3P27448 753 aa17.5■□□□□ 0.39
CCDC90B-203ENST00000525503 NFX1Q12986 1120 aaKnown RBP17.5■□□□□ 0.39
CCDC90B-203ENST00000525503 RNF187Q5TA31 235 aaPredicted RBP17.5■□□□□ 0.39
CCDC90B-203ENST00000525503 GKAP1Q5VSY0 366 aaPredicted RBP17.5■□□□□ 0.39
CCDC90B-203ENST00000525503 C6orf89Q6UWU4 347 aa17.5■□□□□ 0.39
CCDC90B-203ENST00000525503 EEPD1Q7L9B9 569 aa17.5■□□□□ 0.39
CCDC90B-203ENST00000525503 CACNA2D3Q8IZS8 1091 aa17.5■□□□□ 0.39
CCDC90B-203ENST00000525503 CNKSR2Q8WXI2 1034 aa17.5■□□□□ 0.39
CCDC90B-203ENST00000525503 SGIP1Q9BQI5 828 aa17.5■□□□□ 0.39
CCDC90B-203ENST00000525503 CISHQ9NSE2 258 aa17.5■□□□□ 0.39
CCDC90B-203ENST00000525503 NEU2Q9Y3R4 380 aa17.5■□□□□ 0.39
CCDC90B-203ENST00000525503 CEP83Q9Y592 693 aa17.5■□□□□ 0.39
CCDC90B-203ENST00000525503 O00370 1275 aa17.49■□□□□ 0.39
CCDC90B-203ENST00000525503 IRF6O14896 467 aa17.49■□□□□ 0.39
CCDC90B-203ENST00000525503 TTC4O95801 387 aa17.49■□□□□ 0.39
CCDC90B-203ENST00000525503 TNNC2P02585 160 aa17.49■□□□□ 0.39
CCDC90B-203ENST00000525503 CD58P19256 250 aa17.49■□□□□ 0.39
CCDC90B-203ENST00000525503 DRD4P21917 467 aa17.49■□□□□ 0.39
CCDC90B-203ENST00000525503 GJC1P36383 396 aa17.49■□□□□ 0.39
CCDC90B-203ENST00000525503 SLCO1A2P46721 670 aa17.49■□□□□ 0.39
CCDC90B-203ENST00000525503 IREB2P48200 963 aaKnown RBP17.49■□□□□ 0.39
CCDC90B-203ENST00000525503 PPARDQ03181 441 aa17.49■□□□□ 0.39
CCDC90B-203ENST00000525503 IFT88Q13099 833 aa17.49■□□□□ 0.39
CCDC90B-203ENST00000525503 MKRN4PQ13434 485 aaPredicted RBP17.49■□□□□ 0.39
CCDC90B-203ENST00000525503 TRIP13Q15645 432 aaPredicted RBP17.49■□□□□ 0.39
CCDC90B-203ENST00000525503 UBAP2Q5T6F2 1119 aaKnown RBP17.49■□□□□ 0.39
CCDC90B-203ENST00000525503 DAB2IPQ5VWQ8 1189 aa17.49■□□□□ 0.39
CCDC90B-203ENST00000525503 MPZL3Q6UWV2 235 aa17.49■□□□□ 0.39
CCDC90B-203ENST00000525503 TSHZ1Q6ZSZ6 1077 aa17.49■□□□□ 0.39
CCDC90B-203ENST00000525503 CCHCR1Q8TD31 782 aa17.49■□□□□ 0.39
CCDC90B-203ENST00000525503 DCPSQ96C86 337 aaKnown RBP17.49■□□□□ 0.39
CCDC90B-203ENST00000525503 SEC16BQ96JE7 1060 aa17.49■□□□□ 0.39
CCDC90B-203ENST00000525503 FOXP3Q9BZS1 431 aa17.49■□□□□ 0.39
CCDC90B-203ENST00000525503 ADAM7Q9H2U9 754 aa17.49■□□□□ 0.39
CCDC90B-203ENST00000525503 INTS9Q9NV88 658 aaKnown RBP17.49■□□□□ 0.39
CCDC90B-203ENST00000525503 CXCL11O14625 94 aa17.49■□□□□ 0.39
CCDC90B-203ENST00000525503 ABLIM1O14639 778 aa17.49■□□□□ 0.39
CCDC90B-203ENST00000525503 TJP3O95049 919 aa17.49■□□□□ 0.39
CCDC90B-203ENST00000525503 FSBPO95073 299 aa17.49■□□□□ 0.39
CCDC90B-203ENST00000525503 ACSL3O95573 720 aa17.49■□□□□ 0.39
CCDC90B-203ENST00000525503 CHKAP35790 457 aa17.49■□□□□ 0.39
CCDC90B-203ENST00000525503 SLC26A2P50443 739 aa17.49■□□□□ 0.39
CCDC90B-203ENST00000525503 COPS2P61201 443 aa17.49■□□□□ 0.39
CCDC90B-203ENST00000525503 QPCTQ16769 361 aa17.49■□□□□ 0.39
CCDC90B-203ENST00000525503 ZNF699Q32M78 642 aa17.49■□□□□ 0.39
CCDC90B-203ENST00000525503 CCDC125Q86Z20 511 aa17.49■□□□□ 0.39
CCDC90B-203ENST00000525503 SULF1Q8IWU6 871 aa17.49■□□□□ 0.39
CCDC90B-203ENST00000525503 ANKRD36BP1Q96IX9 119 aa17.49■□□□□ 0.39
CCDC90B-203ENST00000525503 DDX23Q9BUQ8 820 aaKnown RBP17.49■□□□□ 0.39
CCDC90B-203ENST00000525503 ASCC2Q9H1I8 757 aaPredicted RBP17.49■□□□□ 0.39
CCDC90B-203ENST00000525503 PCDHGC3Q9UN70 934 aa17.49■□□□□ 0.39
CCDC90B-203ENST00000525503 ZBTB42B2RXF5 422 aa17.48■□□□□ 0.39
CCDC90B-203ENST00000525503 ACKR2O00590 384 aa17.48■□□□□ 0.39
CCDC90B-203ENST00000525503 TCEA3O75764 348 aa17.48■□□□□ 0.39
CCDC90B-203ENST00000525503 CNMDO75829 334 aa17.48■□□□□ 0.39
CCDC90B-203ENST00000525503 ARIH2O95376 493 aa17.48■□□□□ 0.39
CCDC90B-203ENST00000525503 PROZP22891 400 aa17.48■□□□□ 0.39
CCDC90B-203ENST00000525503 EIF4BP23588 611 aaKnown RBP17.48■□□□□ 0.39
CCDC90B-203ENST00000525503 BRD2P25440 801 aaKnown RBP17.48■□□□□ 0.39
CCDC90B-203ENST00000525503 CDH5P33151 784 aaPredicted RBP17.48■□□□□ 0.39
CCDC90B-203ENST00000525503 TFAMQ00059 246 aaKnown RBP17.48■□□□□ 0.39
CCDC90B-203ENST00000525503 PIGHQ14442 188 aaPredicted RBP17.48■□□□□ 0.39
CCDC90B-203ENST00000525503 PLCB4Q15147 1175 aa17.48■□□□□ 0.39
CCDC90B-203ENST00000525503 DCUN1D2Q6PH85 259 aa17.48■□□□□ 0.39
CCDC90B-203ENST00000525503 CCDC121Q6ZUS5 278 aa17.48■□□□□ 0.39
CCDC90B-203ENST00000525503 GSTA5Q7RTV2 222 aa17.48■□□□□ 0.39
CCDC90B-203ENST00000525503 LRRC71Q8N4P6 559 aa17.48■□□□□ 0.39
CCDC90B-203ENST00000525503 ATXN2LQ8WWM7 1075 aaKnown RBP17.48■□□□□ 0.39
CCDC90B-203ENST00000525503 CABS1Q96KC9 395 aa17.48■□□□□ 0.39
CCDC90B-203ENST00000525503 SLITRK1Q96PX8 696 aa17.48■□□□□ 0.39
CCDC90B-203ENST00000525503 CCDC134Q9H6E4 229 aa17.48■□□□□ 0.39
CCDC90B-203ENST00000525503 ADARB2Q9NS39 739 aaKnown RBP17.48■□□□□ 0.39
CCDC90B-203ENST00000525503 DDX56Q9NY93 547 aaKnown RBP17.48■□□□□ 0.39
CCDC90B-203ENST00000525503 SOCS7O14512 581 aa17.47■□□□□ 0.39
CCDC90B-203ENST00000525503 B4GALT4O60513 344 aa17.47■□□□□ 0.39
CCDC90B-203ENST00000525503 GJB6O95452 261 aa17.47■□□□□ 0.39
CCDC90B-203ENST00000525503 KRT1P04264 644 aa17.47■□□□□ 0.39
CCDC90B-203ENST00000525503 PTPN7P35236 360 aa17.47■□□□□ 0.39
CCDC90B-203ENST00000525503 RPL7AP62424 266 aaKnown RBP17.47■□□□□ 0.39
CCDC90B-203ENST00000525503 HSDL1Q3SXM5 330 aa17.47■□□□□ 0.39
CCDC90B-203ENST00000525503 ZFYVE27Q5T4F4 411 aa17.47■□□□□ 0.39
CCDC90B-203ENST00000525503 ATF7IP2Q5U623 682 aa17.47■□□□□ 0.39
CCDC90B-203ENST00000525503 GPAT2Q6NUI2 795 aa17.47■□□□□ 0.39
CCDC90B-203ENST00000525503 DRICH1Q6PGQ1 229 aaPredicted RBP17.47■□□□□ 0.39
CCDC90B-203ENST00000525503 ERICH1Q86X53 443 aa17.47■□□□□ 0.39
CCDC90B-203ENST00000525503 ERO1BQ86YB8 467 aa17.47■□□□□ 0.39
CCDC90B-203ENST00000525503 RHPN2Q8IUC4 686 aa17.47■□□□□ 0.39
CCDC90B-203ENST00000525503 RELL1Q8IUW5 271 aa17.47■□□□□ 0.39
CCDC90B-203ENST00000525503 DHX37Q8IY37 1157 aaKnown RBP17.47■□□□□ 0.39
CCDC90B-203ENST00000525503 IPO4Q8TEX9 1081 aaKnown RBP17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms