RNA–Protein interactions for RNA: ENST00000525469.1

CD44-218, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 705 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-218ENST00000525469 RPS6KL1Q9Y6S9 549 aa5.46□□□□□ -1.54
CD44-218ENST00000525469 EMSYQ7Z589 1322 aa5.46□□□□□ -1.54
CD44-218ENST00000525469 C5orf67F2Z3F1 127 aa5.45□□□□□ -1.54
CD44-218ENST00000525469 NKRFO15226 690 aaKnown RBP eCLIP5.45□□□□□ -1.54
CD44-218ENST00000525469 GRM6O15303 877 aa5.45□□□□□ -1.54
CD44-218ENST00000525469 E2F6O75461 281 aa5.45□□□□□ -1.54
CD44-218ENST00000525469 RECKO95980 971 aa5.45□□□□□ -1.54
CD44-218ENST00000525469 TRIM27P14373 513 aa5.45□□□□□ -1.54
CD44-218ENST00000525469 ZFXP17010 805 aaPredicted RBP5.45□□□□□ -1.54
CD44-218ENST00000525469 BMPR1AP36894 532 aa5.45□□□□□ -1.54
CD44-218ENST00000525469 PSMC1P62191 440 aaKnown RBP5.45□□□□□ -1.54
CD44-218ENST00000525469 MRPS25P82663 173 aaKnown RBP5.45□□□□□ -1.54
CD44-218ENST00000525469 PDE4BQ07343 736 aa5.45□□□□□ -1.54
CD44-218ENST00000525469 IKQ13123 557 aaPredicted RBP5.45□□□□□ -1.54
CD44-218ENST00000525469 RIPK1Q13546 671 aa5.45□□□□□ -1.54
CD44-218ENST00000525469 LAMB3Q13751 1172 aa5.45□□□□□ -1.54
CD44-218ENST00000525469 PPP2R5BQ15173 497 aa5.45□□□□□ -1.54
CD44-218ENST00000525469 TSNAXIP1Q2TAA8 658 aa5.45□□□□□ -1.54
CD44-218ENST00000525469 CCDC40Q4G0X9 1142 aa5.45□□□□□ -1.54
CD44-218ENST00000525469 C1QTNF12Q5T7M4 302 aa5.45□□□□□ -1.54
CD44-218ENST00000525469 HHATQ5VTY9 493 aa5.45□□□□□ -1.54
CD44-218ENST00000525469 SEZ6L2Q6UXD5 910 aa5.45□□□□□ -1.54
CD44-218ENST00000525469 ZNF662Q6ZS27 426 aa5.45□□□□□ -1.54
CD44-218ENST00000525469 ARMCX6Q7L4S7 300 aa5.45□□□□□ -1.54
CD44-218ENST00000525469 CCDC65Q8IXS2 484 aa5.45□□□□□ -1.54
CD44-218ENST00000525469 ARHGAP18Q8N392 663 aa5.45□□□□□ -1.54
CD44-218ENST00000525469 EFHBQ8N7U6 833 aa5.45□□□□□ -1.54
CD44-218ENST00000525469 C7orf31Q8N865 590 aa5.45□□□□□ -1.54
CD44-218ENST00000525469 C1orf131Q8NDD1 294 aaKnown RBP5.45□□□□□ -1.54
CD44-218ENST00000525469 CCDC148Q8NFR7 591 aa5.45□□□□□ -1.54
CD44-218ENST00000525469 OR8K1Q8NGG5 319 aa5.45□□□□□ -1.54
CD44-218ENST00000525469 GPBAR1Q8TDU6 330 aa5.45□□□□□ -1.54
CD44-218ENST00000525469 GATA6Q92908 595 aa5.45□□□□□ -1.54
CD44-218ENST00000525469 TOP1MTQ969P6 601 aa5.45□□□□□ -1.54
CD44-218ENST00000525469 ELMO3Q96BJ8 720 aa5.45□□□□□ -1.54
CD44-218ENST00000525469 SPDL1Q96EA4 605 aa5.45□□□□□ -1.54
CD44-218ENST00000525469 WDR89Q96FK6 387 aaPredicted RBP5.45□□□□□ -1.54
CD44-218ENST00000525469 AGAP3Q96P47 875 aa5.45□□□□□ -1.54
CD44-218ENST00000525469 SPAG5Q96R06 1193 aa5.45□□□□□ -1.54
CD44-218ENST00000525469 NUP88Q99567 741 aaPredicted RBP5.45□□□□□ -1.54
CD44-218ENST00000525469 PARD6BQ9BYG5 372 aa5.45□□□□□ -1.54
CD44-218ENST00000525469 KRTAP9-2Q9BYQ4 174 aa5.45□□□□□ -1.54
CD44-218ENST00000525469 IFIH1Q9BYX4 1025 aaKnown RBP5.45□□□□□ -1.54
CD44-218ENST00000525469 BHMT2Q9H2M3 363 aa5.45□□□□□ -1.54
CD44-218ENST00000525469 FAM204AQ9H8W3 233 aa5.45□□□□□ -1.54
CD44-218ENST00000525469 SLC38A10Q9HBR0 1119 aa5.45□□□□□ -1.54
CD44-218ENST00000525469 PDE11AQ9HCR9 933 aa5.45□□□□□ -1.54
CD44-218ENST00000525469 ST7Q9NRC1 585 aa5.45□□□□□ -1.54
CD44-218ENST00000525469 DISC1Q9NRI5 854 aa5.45□□□□□ -1.54
CD44-218ENST00000525469 C1GALT1Q9NS00 363 aa5.45□□□□□ -1.54
CD44-218ENST00000525469 RNF146Q9NTX7 359 aa5.45□□□□□ -1.54
CD44-218ENST00000525469 ADD3Q9UEY8 706 aaKnown RBP5.45□□□□□ -1.54
CD44-218ENST00000525469 FEM1BQ9UK73 627 aa5.45□□□□□ -1.54
CD44-218ENST00000525469 SYNPO2Q9UMS6 1093 aa5.45□□□□□ -1.54
CD44-218ENST00000525469 L1RE1Q9UN81 338 aa5.45□□□□□ -1.54
CD44-218ENST00000525469 LIMCH1Q9UPQ0 1083 aa5.45□□□□□ -1.54
CD44-218ENST00000525469 WDR37Q9Y2I8 494 aa5.45□□□□□ -1.54
CD44-218ENST00000525469 DAAM1Q9Y4D1 1078 aa5.45□□□□□ -1.54
CD44-218ENST00000525469 MRFAP1Q9Y605 127 aa5.45□□□□□ -1.54
CD44-218ENST00000525469 CAPN7Q9Y6W3 813 aa5.45□□□□□ -1.54
CD44-218ENST00000525469 FASNP49327 2511 aaKnown RBP5.45□□□□□ -1.54
CD44-218ENST00000525469 ZNF292O60281 2723 aa5.44□□□□□ -1.54
CD44-218ENST00000525469 FANCGO15287 622 aa5.44□□□□□ -1.54
CD44-218ENST00000525469 EIF3HO15372 352 aaKnown RBP eCLIP5.44□□□□□ -1.54
CD44-218ENST00000525469 PAX4O43316 350 aa5.44□□□□□ -1.54
CD44-218ENST00000525469 TPD52L2O43399 206 aaKnown RBP5.44□□□□□ -1.54
CD44-218ENST00000525469 CREB3O43889 395 aa5.44□□□□□ -1.54
CD44-218ENST00000525469 KIF5CO60282 957 aa5.44□□□□□ -1.54
CD44-218ENST00000525469 STX10O60499 249 aa5.44□□□□□ -1.54
CD44-218ENST00000525469 FBXO24O75426 580 aa5.44□□□□□ -1.54
CD44-218ENST00000525469 MMP1P03956 469 aa5.44□□□□□ -1.54
CD44-218ENST00000525469 VIMP08670 466 aaKnown RBP5.44□□□□□ -1.54
CD44-218ENST00000525469 FAM87AP0C7U9 286 aa5.44□□□□□ -1.54
CD44-218ENST00000525469 ALAS1P13196 640 aa5.44□□□□□ -1.54
CD44-218ENST00000525469 DESP17661 470 aa5.44□□□□□ -1.54
CD44-218ENST00000525469 SP100P23497 879 aaPredicted RBP5.44□□□□□ -1.54
CD44-218ENST00000525469 KIF5BP33176 963 aa5.44□□□□□ -1.54
CD44-218ENST00000525469 NRIP1P48552 1158 aa5.44□□□□□ -1.54
CD44-218ENST00000525469 LIG3P49916 1009 aa5.44□□□□□ -1.54
CD44-218ENST00000525469 PAPOLAP51003 745 aaKnown RBP5.44□□□□□ -1.54
CD44-218ENST00000525469 ATXN1P54253 815 aaKnown RBP5.44□□□□□ -1.54
CD44-218ENST00000525469 NAP1L1P55209 391 aaKnown RBP5.44□□□□□ -1.54
CD44-218ENST00000525469 CKAP4Q07065 602 aaKnown RBP5.44□□□□□ -1.54
CD44-218ENST00000525469 RBL2Q08999 1139 aa5.44□□□□□ -1.54
CD44-218ENST00000525469 LRMPQ12912 555 aa5.44□□□□□ -1.54
CD44-218ENST00000525469 PSMD2Q13200 908 aa5.44□□□□□ -1.54
CD44-218ENST00000525469 CUL3Q13618 768 aa5.44□□□□□ -1.54
CD44-218ENST00000525469 PKP1Q13835 747 aa5.44□□□□□ -1.54
CD44-218ENST00000525469 CASP8Q14790 479 aa5.44□□□□□ -1.54
CD44-218ENST00000525469 GPNMBQ14956 572 aa5.44□□□□□ -1.54
CD44-218ENST00000525469 TCTN1Q2MV58 587 aa5.44□□□□□ -1.54
CD44-218ENST00000525469 TKFCQ3LXA3 575 aa5.44□□□□□ -1.54
CD44-218ENST00000525469 RRP12Q5JTH9 1297 aaKnown RBP5.44□□□□□ -1.54
CD44-218ENST00000525469 BEND6Q5SZJ8 279 aaPredicted RBP5.44□□□□□ -1.54
CD44-218ENST00000525469 TMEM63BQ5T3F8 832 aa5.44□□□□□ -1.54
CD44-218ENST00000525469 ZNF618Q5T7W0 954 aa5.44□□□□□ -1.54
CD44-218ENST00000525469 PCNX4Q63HM2 1172 aa5.44□□□□□ -1.54
CD44-218ENST00000525469 CDCA2Q69YH5 1023 aaPredicted RBP5.44□□□□□ -1.54
CD44-218ENST00000525469 MTHFD1LQ6UB35 978 aa5.44□□□□□ -1.54
CD44-218ENST00000525469 NSMFQ6X4W1 530 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms