RNA–Protein interactions for RNA: ENST00000525441.5

NR1H3-228, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 610 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-228ENST00000525441 TMEM221A6NGB7 291 aa18.9■□□□□ 0.62
NR1H3-228ENST00000525441 KPNA7A9QM74 516 aa18.9■□□□□ 0.62
NR1H3-228ENST00000525441 M0R296 226 aa18.9■□□□□ 0.62
NR1H3-228ENST00000525441 CLIC2O15247 247 aa18.9■□□□□ 0.62
NR1H3-228ENST00000525441 N4BP1O75113 896 aaKnown RBP18.9■□□□□ 0.62
NR1H3-228ENST00000525441 ITGB3P05106 788 aa18.9■□□□□ 0.62
NR1H3-228ENST00000525441 POLR2BP30876 1174 aaKnown RBP18.9■□□□□ 0.62
NR1H3-228ENST00000525441 CYP2J2P51589 502 aa18.9■□□□□ 0.62
NR1H3-228ENST00000525441 RBP5P82980 135 aa18.9■□□□□ 0.62
NR1H3-228ENST00000525441 ADCY1Q08828 1119 aa18.9■□□□□ 0.62
NR1H3-228ENST00000525441 SNRNP35Q16560 246 aaKnown RBP18.9■□□□□ 0.62
NR1H3-228ENST00000525441 PABPC1LQ4VXU2 614 aaKnown RBP18.9■□□□□ 0.62
NR1H3-228ENST00000525441 KRBA2Q6ZNG9 492 aa18.9■□□□□ 0.62
NR1H3-228ENST00000525441 C12orf56Q8IXR9 622 aa18.9■□□□□ 0.62
NR1H3-228ENST00000525441 THEM5Q8N1Q8 247 aa18.9■□□□□ 0.62
NR1H3-228ENST00000525441 ELMOD1Q8N336 334 aa18.9■□□□□ 0.62
NR1H3-228ENST00000525441 CSGALNACT2Q8N6G5 542 aa18.9■□□□□ 0.62
NR1H3-228ENST00000525441 LRRC52Q8N7C0 313 aa18.9■□□□□ 0.62
NR1H3-228ENST00000525441 C1orf127Q8N9H9 656 aa18.9■□□□□ 0.62
NR1H3-228ENST00000525441 XXYLT1Q8NBI6 393 aa18.9■□□□□ 0.62
NR1H3-228ENST00000525441 NXPE3Q969Y0 559 aa18.9■□□□□ 0.62
NR1H3-228ENST00000525441 INSL5Q9Y5Q6 135 aa18.9■□□□□ 0.62
NR1H3-228ENST00000525441 TECTAO75443 2155 aa18.89■□□□□ 0.62
NR1H3-228ENST00000525441 ZNF202O95125 648 aa18.89■□□□□ 0.61
NR1H3-228ENST00000525441 KIF20AO95235 890 aa18.89■□□□□ 0.61
NR1H3-228ENST00000525441 SEC24AO95486 1093 aa18.89■□□□□ 0.61
NR1H3-228ENST00000525441 TNNC2P02585 160 aa18.89■□□□□ 0.61
NR1H3-228ENST00000525441 RPN1P04843 607 aaKnown RBP18.89■□□□□ 0.61
NR1H3-228ENST00000525441 KRT19P08727 400 aa18.89■□□□□ 0.61
NR1H3-228ENST00000525441 NTHL1P78549 312 aa18.89■□□□□ 0.61
NR1H3-228ENST00000525441 STK4Q13043 487 aa18.89■□□□□ 0.61
NR1H3-228ENST00000525441 GPR17Q13304 367 aa18.89■□□□□ 0.61
NR1H3-228ENST00000525441 TDGQ13569 410 aa18.89■□□□□ 0.61
NR1H3-228ENST00000525441 DUOXA2Q1HG44 320 aa18.89■□□□□ 0.61
NR1H3-228ENST00000525441 RNF19BQ6ZMZ0 732 aa18.89■□□□□ 0.61
NR1H3-228ENST00000525441 MFSD14AQ96MC6 490 aa18.89■□□□□ 0.61
NR1H3-228ENST00000525441 FNBP1Q96RU3 617 aa18.89■□□□□ 0.61
NR1H3-228ENST00000525441 MTMR12Q9C0I1 747 aa18.89■□□□□ 0.61
NR1H3-228ENST00000525441 GOLPH3LQ9H4A5 285 aa18.89■□□□□ 0.61
NR1H3-228ENST00000525441 KCNK12Q9HB15 430 aa18.89■□□□□ 0.61
NR1H3-228ENST00000525441 INTS13Q9NVM9 706 aa18.89■□□□□ 0.61
NR1H3-228ENST00000525441 DNMT3BQ9UBC3 853 aaKnown RBP18.89■□□□□ 0.61
NR1H3-228ENST00000525441 CDH7Q9ULB5 785 aa18.89■□□□□ 0.61
NR1H3-228ENST00000525441 HCN4Q9Y3Q4 1203 aa18.89■□□□□ 0.61
NR1H3-228ENST00000525441 MYO10Q9HD67 2058 aa18.89■□□□□ 0.61
NR1H3-228ENST00000525441 PRPF40AO75400 957 aaKnown RBP18.88■□□□□ 0.61
NR1H3-228ENST00000525441 LAMP2P13473 410 aa18.88■□□□□ 0.61
NR1H3-228ENST00000525441 PTPN2P17706 415 aa18.88■□□□□ 0.61
NR1H3-228ENST00000525441 PLD1Q13393 1074 aa18.88■□□□□ 0.61
NR1H3-228ENST00000525441 BMP8AQ7Z5Y6 402 aa18.88■□□□□ 0.61
NR1H3-228ENST00000525441 WDR49Q8IV35 697 aa18.88■□□□□ 0.61
NR1H3-228ENST00000525441 RDH13Q8NBN7 331 aa18.88■□□□□ 0.61
NR1H3-228ENST00000525441 KIAA0895Q8NCT3 520 aa18.88■□□□□ 0.61
NR1H3-228ENST00000525441 BORCS6Q96GS4 357 aa18.88■□□□□ 0.61
NR1H3-228ENST00000525441 SCN1AP35498 2009 aa18.88■□□□□ 0.61
NR1H3-228ENST00000525441 EXOC3O60645 756 aa18.87■□□□□ 0.61
NR1H3-228ENST00000525441 HUS1O60921 280 aa18.87■□□□□ 0.61
NR1H3-228ENST00000525441 RHOP08100 348 aa18.87■□□□□ 0.61
NR1H3-228ENST00000525441 OR4Q2P0C623 313 aa18.87■□□□□ 0.61
NR1H3-228ENST00000525441 ANP32AP39687 249 aaKnown RBP18.87■□□□□ 0.61
NR1H3-228ENST00000525441 BFSP1Q12934 665 aa18.87■□□□□ 0.61
NR1H3-228ENST00000525441 MYO1EQ12965 1108 aa18.87■□□□□ 0.61
NR1H3-228ENST00000525441 PSMD6Q15008 389 aa18.87■□□□□ 0.61
NR1H3-228ENST00000525441 WSCD1Q658N2 575 aa18.87■□□□□ 0.61
NR1H3-228ENST00000525441 IQCEQ6IPM2 695 aa18.87■□□□□ 0.61
NR1H3-228ENST00000525441 HFE2Q6ZVN8 426 aa18.87■□□□□ 0.61
NR1H3-228ENST00000525441 PBXIP1Q96AQ6 731 aa18.87■□□□□ 0.61
NR1H3-228ENST00000525441 ZNF512Q96ME7 567 aaPredicted RBP18.87■□□□□ 0.61
NR1H3-228ENST00000525441 PGLYRP2Q96PD5 576 aa18.87■□□□□ 0.61
NR1H3-228ENST00000525441 AVENQ9NQS1 362 aaPredicted RBP18.87■□□□□ 0.61
NR1H3-228ENST00000525441 HCFC1R1Q9NWW0 138 aa18.87■□□□□ 0.61
NR1H3-228ENST00000525441 MRPS23Q9Y3D9 190 aaKnown RBP18.87■□□□□ 0.61
NR1H3-228ENST00000525441 ZNF197O14709 1029 aa18.86■□□□□ 0.61
NR1H3-228ENST00000525441 RHOBTB3O94955 611 aa18.86■□□□□ 0.61
NR1H3-228ENST00000525441 PRR29P0C7W0 189 aa18.86■□□□□ 0.61
NR1H3-228ENST00000525441 DLATP10515 647 aaKnown RBP18.86■□□□□ 0.61
NR1H3-228ENST00000525441 TNNI1P19237 187 aa18.86■□□□□ 0.61
NR1H3-228ENST00000525441 CYP24A1Q07973 514 aa18.86■□□□□ 0.61
NR1H3-228ENST00000525441 TWF1Q12792 350 aa18.86■□□□□ 0.61
NR1H3-228ENST00000525441 SMARCB1Q12824 385 aa18.86■□□□□ 0.61
NR1H3-228ENST00000525441 DPYDQ12882 1025 aa18.86■□□□□ 0.61
NR1H3-228ENST00000525441 LMBRD2Q68DH5 695 aaPredicted RBP18.86■□□□□ 0.61
NR1H3-228ENST00000525441 TMEM86AQ8N2M4 240 aa18.86■□□□□ 0.61
NR1H3-228ENST00000525441 LEMD2Q8NC56 503 aa18.86■□□□□ 0.61
NR1H3-228ENST00000525441 FGF13Q92913 245 aa18.86■□□□□ 0.61
NR1H3-228ENST00000525441 CGRRF1Q99675 332 aa18.86■□□□□ 0.61
NR1H3-228ENST00000525441 HSFX1Q9UBD0 423 aa18.86■□□□□ 0.61
NR1H3-228ENST00000525441 SIX4Q9UIU6 781 aa18.86■□□□□ 0.61
NR1H3-228ENST00000525441 YIPF1Q9Y548 306 aa18.86■□□□□ 0.61
NR1H3-228ENST00000525441 DOCK8Q8NF50 2099 aa18.85■□□□□ 0.61
NR1H3-228ENST00000525441 MTMR11A4FU01 709 aa18.85■□□□□ 0.61
NR1H3-228ENST00000525441 PDXKO00764 312 aa18.85■□□□□ 0.61
NR1H3-228ENST00000525441 ALDH1A3P47895 512 aa18.85■□□□□ 0.61
NR1H3-228ENST00000525441 TSPY1Q01534 308 aa18.85■□□□□ 0.61
NR1H3-228ENST00000525441 DUSP4Q13115 394 aa18.85■□□□□ 0.61
NR1H3-228ENST00000525441 KCNB1Q14721 858 aa18.85■□□□□ 0.61
NR1H3-228ENST00000525441 CYP4A22Q5TCH4 519 aa18.85■□□□□ 0.61
NR1H3-228ENST00000525441 CENPPQ6IPU0 288 aa18.85■□□□□ 0.61
NR1H3-228ENST00000525441 MTSS1LQ765P7 747 aa18.85■□□□□ 0.61
NR1H3-228ENST00000525441 SUGP1Q8IWZ8 645 aaKnown RBP18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms