RNA–Protein interactions for RNA: ENST00000525435.1

CCS-202, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-202ENST00000525435 COQ4Q9Y3A0 265 aa13.31□□□□□ -0.28
CCS-202ENST00000525435 A0A0C4DFX4 3053 aa13.31□□□□□ -0.28
CCS-202ENST00000525435 OR6C75A6NL08 312 aa13.3□□□□□ -0.28
CCS-202ENST00000525435 C2CD2LO14523 706 aa13.3□□□□□ -0.28
CCS-202ENST00000525435 P4HA1P13674 534 aa13.3□□□□□ -0.28
CCS-202ENST00000525435 GCLMP48507 274 aa13.3□□□□□ -0.28
CCS-202ENST00000525435 LHX1P48742 406 aa13.3□□□□□ -0.28
CCS-202ENST00000525435 MYL6P60660 151 aa13.3□□□□□ -0.28
CCS-202ENST00000525435 CETN1Q12798 172 aa13.3□□□□□ -0.28
CCS-202ENST00000525435 CCDC85BQ15834 202 aaPredicted RBP13.3□□□□□ -0.28
CCS-202ENST00000525435 OVOS1Q6IE37 1185 aa13.3□□□□□ -0.28
CCS-202ENST00000525435 ZNF280DQ6N043 979 aa13.3□□□□□ -0.28
CCS-202ENST00000525435 LILRA6Q6PI73 481 aa13.3□□□□□ -0.28
CCS-202ENST00000525435 ADGRD2Q7Z7M1 963 aa13.3□□□□□ -0.28
CCS-202ENST00000525435 RBM23Q86U06 439 aaKnown RBP13.3□□□□□ -0.28
CCS-202ENST00000525435 THEM5Q8N1Q8 247 aa13.3□□□□□ -0.28
CCS-202ENST00000525435 MICALL1Q8N3F8 863 aa13.3□□□□□ -0.28
CCS-202ENST00000525435 CCDC150Q8NCX0 1101 aa13.3□□□□□ -0.28
CCS-202ENST00000525435 SLC22A17Q8WUG5 538 aa13.3□□□□□ -0.28
CCS-202ENST00000525435 B3GALT6Q96L58 329 aa13.3□□□□□ -0.28
CCS-202ENST00000525435 PCDHGC5Q9Y5F6 944 aa13.3□□□□□ -0.28
CCS-202ENST00000525435 KIAA1671Q9BY89 1806 aa13.29□□□□□ -0.28
CCS-202ENST00000525435 GABRDO14764 452 aa13.29□□□□□ -0.28
CCS-202ENST00000525435 PER2O15055 1255 aa13.29□□□□□ -0.28
CCS-202ENST00000525435 TACC1O75410 805 aa13.29□□□□□ -0.28
CCS-202ENST00000525435 VNN1O95497 513 aa13.29□□□□□ -0.28
CCS-202ENST00000525435 ASS1P00966 412 aaKnown RBP13.29□□□□□ -0.28
CCS-202ENST00000525435 HLA-DRAP01903 254 aa13.29□□□□□ -0.28
CCS-202ENST00000525435 TRIM49P0CI25 452 aa13.29□□□□□ -0.28
CCS-202ENST00000525435 TRIM49CP0CI26 452 aa13.29□□□□□ -0.28
CCS-202ENST00000525435 HOXB8P17481 243 aaPredicted RBP13.29□□□□□ -0.28
CCS-202ENST00000525435 CA8P35219 290 aa13.29□□□□□ -0.28
CCS-202ENST00000525435 MXI1P50539 228 aa13.29□□□□□ -0.28
CCS-202ENST00000525435 SMARCB1Q12824 385 aa13.29□□□□□ -0.28
CCS-202ENST00000525435 WDR72Q3MJ13 1102 aa13.29□□□□□ -0.28
CCS-202ENST00000525435 CTXN3Q4LDR2 81 aa13.29□□□□□ -0.28
CCS-202ENST00000525435 TCERG1LQ5VWI1 586 aa13.29□□□□□ -0.28
CCS-202ENST00000525435 WSCD1Q658N2 575 aa13.29□□□□□ -0.28
CCS-202ENST00000525435 TPGS2Q68CL5 300 aa13.29□□□□□ -0.28
CCS-202ENST00000525435 PRSS55Q6UWB4 352 aaPredicted RBP13.29□□□□□ -0.28
CCS-202ENST00000525435 IRF2BP1Q8IU81 584 aa13.29□□□□□ -0.28
CCS-202ENST00000525435 TMEM130Q8N3G9 435 aa13.29□□□□□ -0.28
CCS-202ENST00000525435 FBXL13Q8NEE6 735 aa13.29□□□□□ -0.28
CCS-202ENST00000525435 ZNF461Q8TAF7 563 aa13.29□□□□□ -0.28
CCS-202ENST00000525435 CASP10Q92851 521 aa13.29□□□□□ -0.28
CCS-202ENST00000525435 HLA-CQ95604 372 aa13.29□□□□□ -0.28
CCS-202ENST00000525435 BPIFA3Q9BQP9 254 aa13.29□□□□□ -0.28
CCS-202ENST00000525435 IMPG2Q9BZV3 1241 aa13.29□□□□□ -0.28
CCS-202ENST00000525435 PLEKHA4Q9H4M7 779 aa13.29□□□□□ -0.28
CCS-202ENST00000525435 FAM124BQ9H5Z6 455 aaPredicted RBP13.29□□□□□ -0.28
CCS-202ENST00000525435 FBXL5Q9UKA1 691 aa13.29□□□□□ -0.28
CCS-202ENST00000525435 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.29□□□□□ -0.28
CCS-202ENST00000525435 SNX9Q9Y5X1 595 aa13.29□□□□□ -0.28
CCS-202ENST00000525435 ABLIM3O94929 683 aa13.28□□□□□ -0.28
CCS-202ENST00000525435 GLUD1P00367 558 aa13.28□□□□□ -0.28
CCS-202ENST00000525435 EEF1GP26641 437 aaKnown RBP13.28□□□□□ -0.28
CCS-202ENST00000525435 OR1D2P34982 312 aa13.28□□□□□ -0.28
CCS-202ENST00000525435 CLCN4P51793 760 aa13.28□□□□□ -0.28
CCS-202ENST00000525435 TNNC1P63316 161 aa13.28□□□□□ -0.28
CCS-202ENST00000525435 SKIV2LQ15477 1246 aaKnown RBP13.28□□□□□ -0.28
CCS-202ENST00000525435 SOWAHAQ2M3V2 549 aa13.28□□□□□ -0.28
CCS-202ENST00000525435 UVSSAQ2YD98 709 aa13.28□□□□□ -0.28
CCS-202ENST00000525435 ZNF699Q32M78 642 aa13.28□□□□□ -0.28
CCS-202ENST00000525435 DCAF17Q5H9S7 520 aaPredicted RBP13.28□□□□□ -0.28
CCS-202ENST00000525435 ZNF667Q5HYK9 610 aa13.28□□□□□ -0.28
CCS-202ENST00000525435 SCARA3Q6AZY7 606 aa13.28□□□□□ -0.28
CCS-202ENST00000525435 SMYD5Q6GMV2 418 aa13.28□□□□□ -0.28
CCS-202ENST00000525435 CYP26C1Q6V0L0 522 aa13.28□□□□□ -0.28
CCS-202ENST00000525435 PDCL2Q8N4E4 241 aa13.28□□□□□ -0.28
CCS-202ENST00000525435 TAS1R2Q8TE23 839 aa13.28□□□□□ -0.28
CCS-202ENST00000525435 FAM84AQ96KN4 292 aa13.28□□□□□ -0.28
CCS-202ENST00000525435 ACBD6Q9BR61 282 aa13.28□□□□□ -0.28
CCS-202ENST00000525435 FUCA2Q9BTY2 467 aa13.28□□□□□ -0.28
CCS-202ENST00000525435 IGFLR1Q9H665 355 aa13.28□□□□□ -0.28
CCS-202ENST00000525435 DZANK1Q9NVP4 752 aa13.28□□□□□ -0.28
CCS-202ENST00000525435 RAB20Q9NX57 234 aa13.28□□□□□ -0.28
CCS-202ENST00000525435 MAGEC2Q9UBF1 373 aaPredicted RBP13.28□□□□□ -0.28
CCS-202ENST00000525435 NFE2L3Q9Y4A8 694 aa13.28□□□□□ -0.28
CCS-202ENST00000525435 TIMM13Q9Y5L4 95 aaPredicted RBP13.28□□□□□ -0.28
CCS-202ENST00000525435 HCFC2Q9Y5Z7 792 aa13.28□□□□□ -0.28
CCS-202ENST00000525435 ANK1P16157 1881 aa13.27□□□□□ -0.28
CCS-202ENST00000525435 TGM5O43548 720 aa13.27□□□□□ -0.29
CCS-202ENST00000525435 CSPG5O95196 566 aa13.27□□□□□ -0.29
CCS-202ENST00000525435 PAPLNO95428 1278 aa13.27□□□□□ -0.29
CCS-202ENST00000525435 AFPP02771 609 aaKnown RBP13.27□□□□□ -0.29
CCS-202ENST00000525435 WARSP23381 471 aaKnown RBP13.27□□□□□ -0.29
CCS-202ENST00000525435 PCSK1P29120 753 aa13.27□□□□□ -0.29
CCS-202ENST00000525435 LTBRP36941 435 aa13.27□□□□□ -0.29
CCS-202ENST00000525435 PIK3CAP42336 1068 aa13.27□□□□□ -0.29
CCS-202ENST00000525435 FMO5P49326 533 aa13.27□□□□□ -0.29
CCS-202ENST00000525435 MYL5Q02045 173 aa13.27□□□□□ -0.29
CCS-202ENST00000525435 KCNH2Q12809 1159 aa13.27□□□□□ -0.29
CCS-202ENST00000525435 GPR17Q13304 367 aa13.27□□□□□ -0.29
CCS-202ENST00000525435 AAK1Q2M2I8 961 aa13.27□□□□□ -0.29
CCS-202ENST00000525435 WDR44Q5JSH3 913 aa13.27□□□□□ -0.29
CCS-202ENST00000525435 TTC39CQ8N584 583 aa13.27□□□□□ -0.29
CCS-202ENST00000525435 PPM1EQ8WY54 764 aa13.27□□□□□ -0.29
CCS-202ENST00000525435 CNOT6LQ96LI5 555 aaKnown RBP13.27□□□□□ -0.29
CCS-202ENST00000525435 MMS19Q96T76 1030 aa13.27□□□□□ -0.29
CCS-202ENST00000525435 RHOBTB2Q9BYZ6 727 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 120.7 ms