RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 TSC2P49815 1807 aa20.05■□□□□ 0.8
CAPN1-203ENST00000525013 CYB561D2O14569 222 aa20.05■□□□□ 0.8
CAPN1-203ENST00000525013 RFX1P22670 979 aa20.05■□□□□ 0.8
CAPN1-203ENST00000525013 CLCN5P51795 746 aa20.05■□□□□ 0.8
CAPN1-203ENST00000525013 PTPN5P54829 565 aa20.05■□□□□ 0.8
CAPN1-203ENST00000525013 WNT7BP56706 349 aa20.05■□□□□ 0.8
CAPN1-203ENST00000525013 GPR17Q13304 367 aa20.05■□□□□ 0.8
CAPN1-203ENST00000525013 CYP4A22Q5TCH4 519 aa20.05■□□□□ 0.8
CAPN1-203ENST00000525013 RESP18Q5W5W9 173 aa20.05■□□□□ 0.8
CAPN1-203ENST00000525013 METTL23Q86XA0 190 aa20.05■□□□□ 0.8
CAPN1-203ENST00000525013 NT5DC4Q86YG4 428 aa20.05■□□□□ 0.8
CAPN1-203ENST00000525013 TMEM105Q8N8V8 129 aa20.05■□□□□ 0.8
CAPN1-203ENST00000525013 C7orf25Q9BPX7 421 aa20.05■□□□□ 0.8
CAPN1-203ENST00000525013 MAGEF1Q9HAY2 307 aa20.05■□□□□ 0.8
CAPN1-203ENST00000525013 RCOR1Q9UKL0 485 aa20.05■□□□□ 0.8
CAPN1-203ENST00000525013 DSEQ9UL01 958 aa20.05■□□□□ 0.8
CAPN1-203ENST00000525013 CEBPBP17676 345 aa20.04■□□□□ 0.8
CAPN1-203ENST00000525013 CASP1P29466 404 aa20.04■□□□□ 0.8
CAPN1-203ENST00000525013 AFMP43652 599 aa20.04■□□□□ 0.8
CAPN1-203ENST00000525013 DUSP4Q13115 394 aa20.04■□□□□ 0.8
CAPN1-203ENST00000525013 MYBPC2Q14324 1141 aa20.04■□□□□ 0.8
CAPN1-203ENST00000525013 FAM26FQ5R3K3 315 aa20.04■□□□□ 0.8
CAPN1-203ENST00000525013 PDZD4Q76G19 769 aaPredicted RBP20.04■□□□□ 0.8
CAPN1-203ENST00000525013 GPD1LQ8N335 351 aa20.04■□□□□ 0.8
CAPN1-203ENST00000525013 GPR152Q8TDT2 470 aa20.04■□□□□ 0.8
CAPN1-203ENST00000525013 CACTINQ8WUQ7 758 aaKnown RBP20.04■□□□□ 0.8
CAPN1-203ENST00000525013 TCEAL4Q96EI5 215 aa20.04■□□□□ 0.8
CAPN1-203ENST00000525013 KXD1Q9BQD3 176 aa20.04■□□□□ 0.8
CAPN1-203ENST00000525013 BLZF1Q9H2G9 400 aa20.04■□□□□ 0.8
CAPN1-203ENST00000525013 AVENQ9NQS1 362 aaPredicted RBP20.04■□□□□ 0.8
CAPN1-203ENST00000525013 GDE1Q9NZC3 331 aa20.04■□□□□ 0.8
CAPN1-203ENST00000525013 CEP72Q9P209 647 aa20.04■□□□□ 0.8
CAPN1-203ENST00000525013 YIPF1Q9Y548 306 aa20.04■□□□□ 0.8
CAPN1-203ENST00000525013 ZNF197O14709 1029 aa20.03■□□□□ 0.8
CAPN1-203ENST00000525013 MYL4P12829 197 aa20.03■□□□□ 0.8
CAPN1-203ENST00000525013 TCF15Q12870 199 aa20.03■□□□□ 0.8
CAPN1-203ENST00000525013 SV2CQ496J9 727 aa20.03■□□□□ 0.8
CAPN1-203ENST00000525013 CNNM4Q6P4Q7 775 aa20.03■□□□□ 0.8
CAPN1-203ENST00000525013 CEP57L1Q8IYX8 460 aa20.03■□□□□ 0.8
CAPN1-203ENST00000525013 HS6ST3Q8IZP7 471 aa20.03■□□□□ 0.8
CAPN1-203ENST00000525013 THEM5Q8N1Q8 247 aa20.03■□□□□ 0.8
CAPN1-203ENST00000525013 ATAD1Q8NBU5 361 aa20.03■□□□□ 0.8
CAPN1-203ENST00000525013 ZNF560Q96MR9 790 aa20.03■□□□□ 0.8
CAPN1-203ENST00000525013 TMEM209Q96SK2 561 aa20.03■□□□□ 0.8
CAPN1-203ENST00000525013 PDE11AQ9HCR9 933 aa20.03■□□□□ 0.8
CAPN1-203ENST00000525013 AGAP1Q9UPQ3 857 aa20.03■□□□□ 0.8
CAPN1-203ENST00000525013 SLC27A5Q9Y2P5 690 aa20.03■□□□□ 0.8
CAPN1-203ENST00000525013 KRBA1A5PL33 1030 aa20.02■□□□□ 0.8
CAPN1-203ENST00000525013 KPNA7A9QM74 516 aa20.02■□□□□ 0.8
CAPN1-203ENST00000525013 KIAA0391O15091 583 aaKnown RBP20.02■□□□□ 0.8
CAPN1-203ENST00000525013 EIF3DO15371 548 aaKnown RBP eCLIP20.02■□□□□ 0.8
CAPN1-203ENST00000525013 VNN2O95498 520 aa20.02■□□□□ 0.8
CAPN1-203ENST00000525013 ITGB3P05106 788 aa20.02■□□□□ 0.8
CAPN1-203ENST00000525013 CYP11A1P05108 521 aa20.02■□□□□ 0.8
CAPN1-203ENST00000525013 NPR3P17342 541 aa20.02■□□□□ 0.8
CAPN1-203ENST00000525013 POLR2BP30876 1174 aaKnown RBP20.02■□□□□ 0.8
CAPN1-203ENST00000525013 HOXD13P35453 343 aa20.02■□□□□ 0.8
CAPN1-203ENST00000525013 ALDH1A3P47895 512 aa20.02■□□□□ 0.8
CAPN1-203ENST00000525013 CDR1P51861 262 aa20.02■□□□□ 0.8
CAPN1-203ENST00000525013 GPC5P78333 572 aa20.02■□□□□ 0.8
CAPN1-203ENST00000525013 PLD1Q13393 1074 aa20.02■□□□□ 0.8
CAPN1-203ENST00000525013 PRSS36Q5K4E3 855 aa20.02■□□□□ 0.8
CAPN1-203ENST00000525013 WSCD1Q658N2 575 aa20.02■□□□□ 0.8
CAPN1-203ENST00000525013 CWF19L1Q69YN2 538 aaKnown RBP20.02■□□□□ 0.8
CAPN1-203ENST00000525013 UNC13DQ70J99 1090 aa20.02■□□□□ 0.8
CAPN1-203ENST00000525013 FAM84AQ96KN4 292 aa20.02■□□□□ 0.8
CAPN1-203ENST00000525013 CRISPLD1Q9H336 500 aa20.02■□□□□ 0.8
CAPN1-203ENST00000525013 ASAH2Q9NR71 780 aa20.02■□□□□ 0.8
CAPN1-203ENST00000525013 SLC2A4RGQ9NR83 387 aa20.02■□□□□ 0.8
CAPN1-203ENST00000525013 MTMR11A4FU01 709 aa20.01■□□□□ 0.79
CAPN1-203ENST00000525013 ZNF233A6NK53 670 aa20.01■□□□□ 0.79
CAPN1-203ENST00000525013 GALR2O43603 387 aaPredicted RBP20.01■□□□□ 0.79
CAPN1-203ENST00000525013 PI15O43692 258 aa20.01■□□□□ 0.79
CAPN1-203ENST00000525013 KRT19P08727 400 aa20.01■□□□□ 0.79
CAPN1-203ENST00000525013 TMEM191BP0C7N4 346 aa20.01■□□□□ 0.79
CAPN1-203ENST00000525013 HOXD11P31277 338 aaPredicted RBP20.01■□□□□ 0.79
CAPN1-203ENST00000525013 PNPLA4P41247 253 aa20.01■□□□□ 0.79
CAPN1-203ENST00000525013 CCR2P41597 374 aa20.01■□□□□ 0.79
CAPN1-203ENST00000525013 NUBP1P53384 320 aa20.01■□□□□ 0.79
CAPN1-203ENST00000525013 EPHB3P54753 998 aa20.01■□□□□ 0.79
CAPN1-203ENST00000525013 SLC39A12Q504Y0 691 aa20.01■□□□□ 0.79
CAPN1-203ENST00000525013 CENPPQ6IPU0 288 aa20.01■□□□□ 0.79
CAPN1-203ENST00000525013 EPM2AIP1Q7L775 607 aaPredicted RBP20.01■□□□□ 0.79
CAPN1-203ENST00000525013 ALYREFQ86V81 257 aaKnown RBP20.01■□□□□ 0.79
CAPN1-203ENST00000525013 NELFCDQ8IXH7 590 aa20.01■□□□□ 0.79
CAPN1-203ENST00000525013 GRAMD1CQ8IYS0 662 aa20.01■□□□□ 0.79
CAPN1-203ENST00000525013 CSGALNACT2Q8N6G5 542 aa20.01■□□□□ 0.79
CAPN1-203ENST00000525013 C1orf127Q8N9H9 656 aa20.01■□□□□ 0.79
CAPN1-203ENST00000525013 OR10T2Q8NGX3 314 aa20.01■□□□□ 0.79
CAPN1-203ENST00000525013 ZNF507Q8TCN5 953 aa20.01■□□□□ 0.79
CAPN1-203ENST00000525013 ARHGEF3Q9NR81 526 aa20.01■□□□□ 0.79
CAPN1-203ENST00000525013 HSPBP1Q9NZL4 362 aa20.01■□□□□ 0.79
CAPN1-203ENST00000525013 SERTAD1Q9UHV2 236 aa20.01■□□□□ 0.79
CAPN1-203ENST00000525013 R3HCC1Q9Y3T6 440 aaKnown RBP20.01■□□□□ 0.79
CAPN1-203ENST00000525013 AOC1P19801 751 aa20■□□□□ 0.79
CAPN1-203ENST00000525013 KRT85P78386 507 aa20■□□□□ 0.79
CAPN1-203ENST00000525013 BFSP1Q12934 665 aa20■□□□□ 0.79
CAPN1-203ENST00000525013 CUL4BQ13620 913 aa20■□□□□ 0.79
CAPN1-203ENST00000525013 LMBRD2Q68DH5 695 aaPredicted RBP20■□□□□ 0.79
CAPN1-203ENST00000525013 CBWD2Q8IUF1 395 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms