RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 RABL6Q3YEC7 729 aaPredicted RBP8.22□□□□□ -1.09
NEDD8-203ENST00000524927 TM4SF20Q53R12 229 aa8.22□□□□□ -1.09
NEDD8-203ENST00000524927 TMEM63BQ5T3F8 832 aa8.22□□□□□ -1.09
NEDD8-203ENST00000524927 BEND3Q5T5X7 828 aa8.22□□□□□ -1.09
NEDD8-203ENST00000524927 ZNF618Q5T7W0 954 aa8.22□□□□□ -1.09
NEDD8-203ENST00000524927 CNNM4Q6P4Q7 775 aa8.22□□□□□ -1.09
NEDD8-203ENST00000524927 SPICE1Q8N0Z3 855 aa8.22□□□□□ -1.09
NEDD8-203ENST00000524927 CELF5Q8N6W0 485 aaKnown RBP8.22□□□□□ -1.09
NEDD8-203ENST00000524927 SLC7A14Q8TBB6 771 aa8.22□□□□□ -1.09
NEDD8-203ENST00000524927 DCAF4Q8WV16 495 aa8.22□□□□□ -1.09
NEDD8-203ENST00000524927 SEPT8Q92599 483 aa8.22□□□□□ -1.09
NEDD8-203ENST00000524927 C1orf159Q96HA4 380 aa8.22□□□□□ -1.09
NEDD8-203ENST00000524927 KAZALD1Q96I82 304 aa8.22□□□□□ -1.09
NEDD8-203ENST00000524927 CLMPQ9H6B4 373 aa8.22□□□□□ -1.09
NEDD8-203ENST00000524927 SH2D4AQ9H788 454 aa8.22□□□□□ -1.09
NEDD8-203ENST00000524927 VTA1Q9NP79 307 aa8.22□□□□□ -1.09
NEDD8-203ENST00000524927 AP5S1Q9NUS5 200 aa8.22□□□□□ -1.09
NEDD8-203ENST00000524927 SPATA6Q9NWH7 488 aaPredicted RBP8.22□□□□□ -1.09
NEDD8-203ENST00000524927 C9orf78Q9NZ63 289 aaPredicted RBP8.22□□□□□ -1.09
NEDD8-203ENST00000524927 IGSF9Q9P2J2 1179 aa8.22□□□□□ -1.09
NEDD8-203ENST00000524927 NEUROG3Q9Y4Z2 214 aa8.22□□□□□ -1.09
NEDD8-203ENST00000524927 RAD50Q92878 1312 aa8.22□□□□□ -1.09
NEDD8-203ENST00000524927 ITPR3Q14573 2671 aa8.21□□□□□ -1.09
NEDD8-203ENST00000524927 UBR5O95071 2799 aaPredicted RBP8.21□□□□□ -1.1
NEDD8-203ENST00000524927 ATP2A1O14983 1001 aa8.21□□□□□ -1.1
NEDD8-203ENST00000524927 PLS3P13797 630 aa8.21□□□□□ -1.1
NEDD8-203ENST00000524927 RPL10P27635 214 aaKnown RBP8.21□□□□□ -1.1
NEDD8-203ENST00000524927 ANAPC15P60006 121 aa8.21□□□□□ -1.1
NEDD8-203ENST00000524927 GNAI1P63096 354 aa8.21□□□□□ -1.1
NEDD8-203ENST00000524927 UBE3AQ05086 875 aa8.21□□□□□ -1.1
NEDD8-203ENST00000524927 EGR3Q06889 387 aa8.21□□□□□ -1.1
NEDD8-203ENST00000524927 BTG3Q14201 252 aaPredicted RBP8.21□□□□□ -1.1
NEDD8-203ENST00000524927 EEF1DP3Q658K8 133 aa8.21□□□□□ -1.1
NEDD8-203ENST00000524927 DENND5AQ6IQ26 1287 aa8.21□□□□□ -1.1
NEDD8-203ENST00000524927 RCSD1Q6JBY9 416 aa8.21□□□□□ -1.1
NEDD8-203ENST00000524927 SLC4A10Q6U841 1118 aa8.21□□□□□ -1.1
NEDD8-203ENST00000524927 MAMDC2Q7Z304 686 aaPredicted RBP8.21□□□□□ -1.1
NEDD8-203ENST00000524927 BRAPQ7Z569 592 aa8.21□□□□□ -1.1
NEDD8-203ENST00000524927 NAT16Q8N8M0 369 aa8.21□□□□□ -1.1
NEDD8-203ENST00000524927 AGBL5Q8NDL9 886 aa8.21□□□□□ -1.1
NEDD8-203ENST00000524927 PJA1Q8NG27 643 aa8.21□□□□□ -1.1
NEDD8-203ENST00000524927 FRS2Q8WU20 508 aa8.21□□□□□ -1.1
NEDD8-203ENST00000524927 ASB11Q8WXH4 323 aa8.21□□□□□ -1.1
NEDD8-203ENST00000524927 VCPKMTQ9H867 229 aa8.21□□□□□ -1.1
NEDD8-203ENST00000524927 KCNK12Q9HB15 430 aa8.21□□□□□ -1.1
NEDD8-203ENST00000524927 FBXO28Q9NVF7 368 aa8.21□□□□□ -1.1
NEDD8-203ENST00000524927 SAP30BPQ9UHR5 308 aaKnown RBP8.21□□□□□ -1.1
NEDD8-203ENST00000524927 TMX2Q9Y320 296 aa8.21□□□□□ -1.1
NEDD8-203ENST00000524927 TRAF6Q9Y4K3 522 aa8.21□□□□□ -1.1
NEDD8-203ENST00000524927 EYA2O00167 538 aa8.2□□□□□ -1.1
NEDD8-203ENST00000524927 PRB1P04280 392 aa8.2□□□□□ -1.1
NEDD8-203ENST00000524927 PAMP19021 973 aa8.2□□□□□ -1.1
NEDD8-203ENST00000524927 SDSP20132 328 aa8.2□□□□□ -1.1
NEDD8-203ENST00000524927 ENDOUP21128 410 aaKnown RBP8.2□□□□□ -1.1
NEDD8-203ENST00000524927 CD96P40200 585 aa8.2□□□□□ -1.1
NEDD8-203ENST00000524927 MAGEA9P43362 315 aa8.2□□□□□ -1.1
NEDD8-203ENST00000524927 CNTN2Q02246 1040 aa8.2□□□□□ -1.1
NEDD8-203ENST00000524927 TRIM61Q5EBN2 209 aa8.2□□□□□ -1.1
NEDD8-203ENST00000524927 RTP2Q5QGT7 225 aa8.2□□□□□ -1.1
NEDD8-203ENST00000524927 XRRA1Q6P2D8 792 aa8.2□□□□□ -1.1
NEDD8-203ENST00000524927 KCNT2Q6UVM3 1135 aa8.2□□□□□ -1.1
NEDD8-203ENST00000524927 FBXO16Q8IX29 292 aaPredicted RBP8.2□□□□□ -1.1
NEDD8-203ENST00000524927 CHST13Q8NET6 341 aa8.2□□□□□ -1.1
NEDD8-203ENST00000524927 CASP10Q92851 521 aa8.2□□□□□ -1.1
NEDD8-203ENST00000524927 ZNF689Q96CS4 500 aaPredicted RBP8.2□□□□□ -1.1
NEDD8-203ENST00000524927 MAGEB10Q96LZ2 347 aaPredicted RBP8.2□□□□□ -1.1
NEDD8-203ENST00000524927 PCDH12Q9NPG4 1184 aa8.2□□□□□ -1.1
NEDD8-203ENST00000524927 AATFQ9NY61 560 aaKnown RBP eCLIP8.2□□□□□ -1.1
NEDD8-203ENST00000524927 MAGEC2Q9UBF1 373 aaPredicted RBP8.2□□□□□ -1.1
NEDD8-203ENST00000524927 CDH22Q9UJ99 828 aa8.2□□□□□ -1.1
NEDD8-203ENST00000524927 NOP58Q9Y2X3 529 aaKnown RBP8.2□□□□□ -1.1
NEDD8-203ENST00000524927 C2CD3Q4AC94 2353 aa8.19□□□□□ -1.1
NEDD8-203ENST00000524927 RSPH10B2B2RC85 870 aa8.19□□□□□ -1.1
NEDD8-203ENST00000524927 AQP7O14520 342 aa8.19□□□□□ -1.1
NEDD8-203ENST00000524927 NARSO43776 548 aaKnown RBP8.19□□□□□ -1.1
NEDD8-203ENST00000524927 RSPH10BP0C881 870 aa8.19□□□□□ -1.1
NEDD8-203ENST00000524927 SHMT1P34896 483 aa8.19□□□□□ -1.1
NEDD8-203ENST00000524927 NOVA1P51513 510 aaKnown RBP8.19□□□□□ -1.1
NEDD8-203ENST00000524927 RIPPLY3P57055 190 aa8.19□□□□□ -1.1
NEDD8-203ENST00000524927 TROAPQ12815 778 aa8.19□□□□□ -1.1
NEDD8-203ENST00000524927 NONOQ15233 471 aaKnown RBP eCLIP8.19□□□□□ -1.1
NEDD8-203ENST00000524927 AASDHQ4L235 1098 aaPredicted RBP8.19□□□□□ -1.1
NEDD8-203ENST00000524927 ATAT1Q5SQI0 421 aa8.19□□□□□ -1.1
NEDD8-203ENST00000524927 ACBD5Q5T8D3 534 aaPredicted RBP8.19□□□□□ -1.1
NEDD8-203ENST00000524927 STPG1Q5TH74 334 aa8.19□□□□□ -1.1
NEDD8-203ENST00000524927 E4F1Q66K89 784 aaPredicted RBP8.19□□□□□ -1.1
NEDD8-203ENST00000524927 IQCEQ6IPM2 695 aa8.19□□□□□ -1.1
NEDD8-203ENST00000524927 KIAA1841Q6NSI8 718 aa8.19□□□□□ -1.1
NEDD8-203ENST00000524927 OTOP3Q7RTS5 596 aa8.19□□□□□ -1.1
NEDD8-203ENST00000524927 OR6J1Q8NGC5 347 aa8.19□□□□□ -1.1
NEDD8-203ENST00000524927 DIO2Q92813 273 aa8.19□□□□□ -1.1
NEDD8-203ENST00000524927 APBB2Q92870 758 aa8.19□□□□□ -1.1
NEDD8-203ENST00000524927 SUCLG2Q96I99 432 aa8.19□□□□□ -1.1
NEDD8-203ENST00000524927 GPR20Q99678 358 aa8.19□□□□□ -1.1
NEDD8-203ENST00000524927 PHF20Q9BVI0 1012 aa8.19□□□□□ -1.1
NEDD8-203ENST00000524927 WDR11Q9BZH6 1224 aa8.19□□□□□ -1.1
NEDD8-203ENST00000524927 BRINP2Q9C0B6 783 aa8.19□□□□□ -1.1
NEDD8-203ENST00000524927 TRIM39Q9HCM9 518 aa8.19□□□□□ -1.1
NEDD8-203ENST00000524927 ARHGEF3Q9NR81 526 aa8.19□□□□□ -1.1
NEDD8-203ENST00000524927 TMEFF2Q9UIK5 374 aaPredicted RBP8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms