RNA–Protein interactions for RNA: ENST00000524926.5

BEST1-204, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 2,404 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-204ENST00000524926 KATNAL1Q9BW62 490 aa16.26■□□□□ 0.19
BEST1-204ENST00000524926 DPP3Q9NY33 737 aa16.26■□□□□ 0.19
BEST1-204ENST00000524926 SNTG2Q9NY99 539 aa16.26■□□□□ 0.19
BEST1-204ENST00000524926 C6orf222P0C671 652 aaPredicted RBP16.25■□□□□ 0.19
BEST1-204ENST00000524926 PYGMP11217 842 aa16.25■□□□□ 0.19
BEST1-204ENST00000524926 DARSP14868 501 aaKnown RBP16.25■□□□□ 0.19
BEST1-204ENST00000524926 EIF4BP23588 611 aaKnown RBP16.25■□□□□ 0.19
BEST1-204ENST00000524926 ATICP31939 592 aa16.25■□□□□ 0.19
BEST1-204ENST00000524926 EPHB4P54760 987 aa16.25■□□□□ 0.19
BEST1-204ENST00000524926 RWDD2BP57060 319 aa16.25■□□□□ 0.19
BEST1-204ENST00000524926 C1QBPQ07021 282 aaKnown RBP16.25■□□□□ 0.19
BEST1-204ENST00000524926 MAMLD1Q13495 774 aa16.25■□□□□ 0.19
BEST1-204ENST00000524926 NOTUMQ6P988 496 aa16.25■□□□□ 0.19
BEST1-204ENST00000524926 TMEM35BQ8NCS4 154 aa16.25■□□□□ 0.19
BEST1-204ENST00000524926 CXorf38Q8TB03 319 aa16.25■□□□□ 0.19
BEST1-204ENST00000524926 BCO2Q9BYV7 579 aa16.25■□□□□ 0.19
BEST1-204ENST00000524926 TRIM6Q9C030 488 aaPredicted RBP16.25■□□□□ 0.19
BEST1-204ENST00000524926 NFU1Q9UMS0 254 aa16.25■□□□□ 0.19
BEST1-204ENST00000524926 C2CD2Q9Y426 696 aa16.25■□□□□ 0.19
BEST1-204ENST00000524926 CEP83Q9Y592 693 aa16.25■□□□□ 0.19
BEST1-204ENST00000524926 CA12O43570 354 aa16.25■□□□□ 0.19
BEST1-204ENST00000524926 CTNNA2P26232 953 aa16.25■□□□□ 0.19
BEST1-204ENST00000524926 TNFRSF8P28908 595 aa16.25■□□□□ 0.19
BEST1-204ENST00000524926 ADAM17P78536 824 aa16.25■□□□□ 0.19
BEST1-204ENST00000524926 ORC1Q13415 861 aa16.25■□□□□ 0.19
BEST1-204ENST00000524926 MAATS1Q7Z4T9 603 aa16.25■□□□□ 0.19
BEST1-204ENST00000524926 C7orf31Q8N865 590 aa16.25■□□□□ 0.19
BEST1-204ENST00000524926 EIF2AQ9BY44 585 aaKnown RBP16.25■□□□□ 0.19
BEST1-204ENST00000524926 SDCBP2Q9H190 292 aa16.25■□□□□ 0.19
BEST1-204ENST00000524926 ACBD3Q9H3P7 528 aa16.25■□□□□ 0.19
BEST1-204ENST00000524926 SLITRK6Q9H5Y7 841 aa16.25■□□□□ 0.19
BEST1-204ENST00000524926 SMYD3Q9H7B4 428 aa16.25■□□□□ 0.19
BEST1-204ENST00000524926 HES2Q9Y543 173 aa16.25■□□□□ 0.19
BEST1-204ENST00000524926 C17orf102A2RUQ5 167 aa16.24■□□□□ 0.19
BEST1-204ENST00000524926 LSM8O95777 96 aaKnown RBP16.24■□□□□ 0.19
BEST1-204ENST00000524926 P4HA1P13674 534 aa16.24■□□□□ 0.19
BEST1-204ENST00000524926 MMP8P22894 467 aa16.24■□□□□ 0.19
BEST1-204ENST00000524926 OAS2P29728 719 aaKnown RBP16.24■□□□□ 0.19
BEST1-204ENST00000524926 PSMC4P43686 418 aa16.24■□□□□ 0.19
BEST1-204ENST00000524926 TM4SF4P48230 202 aa16.24■□□□□ 0.19
BEST1-204ENST00000524926 RBP5P82980 135 aa16.24■□□□□ 0.19
BEST1-204ENST00000524926 PTP4A2Q12974 167 aa16.24■□□□□ 0.19
BEST1-204ENST00000524926 TRADDQ15628 312 aa16.24■□□□□ 0.19
BEST1-204ENST00000524926 KCTD19Q17RG1 926 aaPredicted RBP16.24■□□□□ 0.19
BEST1-204ENST00000524926 CASKIN2Q8WXE0 1202 aa16.24■□□□□ 0.19
BEST1-204ENST00000524926 ARHGAP39Q9C0H5 1083 aa16.24■□□□□ 0.19
BEST1-204ENST00000524926 PARVAQ9NVD7 372 aa16.24■□□□□ 0.19
BEST1-204ENST00000524926 ITGA11Q9UKX5 1188 aa16.24■□□□□ 0.19
BEST1-204ENST00000524926 SCINQ9Y6U3 715 aa16.24■□□□□ 0.19
BEST1-204ENST00000524926 CITO14578 2027 aa16.24■□□□□ 0.19
BEST1-204ENST00000524926 TRIP12Q14669 1992 aaPredicted RBP16.24■□□□□ 0.19
BEST1-204ENST00000524926 POLR3GO15318 223 aaPredicted RBP16.24■□□□□ 0.19
BEST1-204ENST00000524926 TLR3O15455 904 aaKnown RBP16.24■□□□□ 0.19
BEST1-204ENST00000524926 SLC1A1P43005 524 aa16.24■□□□□ 0.19
BEST1-204ENST00000524926 YARSP54577 528 aaKnown RBP16.24■□□□□ 0.19
BEST1-204ENST00000524926 PURAQ00577 322 aaKnown RBP16.24■□□□□ 0.19
BEST1-204ENST00000524926 PAK2Q13177 524 aa16.24■□□□□ 0.19
BEST1-204ENST00000524926 PLEKHA7Q6IQ23 1121 aa16.24■□□□□ 0.19
BEST1-204ENST00000524926 CD302Q8IX05 232 aa16.24■□□□□ 0.19
BEST1-204ENST00000524926 UBXN6Q9BZV1 441 aa16.24■□□□□ 0.19
BEST1-204ENST00000524926 ZNF518BQ9C0D4 1074 aa16.24■□□□□ 0.19
BEST1-204ENST00000524926 VIPAS39Q9H9C1 493 aa16.24■□□□□ 0.19
BEST1-204ENST00000524926 TTI1O43156 1089 aa16.23■□□□□ 0.19
BEST1-204ENST00000524926 MED7O43513 233 aa16.23■□□□□ 0.19
BEST1-204ENST00000524926 GJB6O95452 261 aa16.23■□□□□ 0.19
BEST1-204ENST00000524926 IGHA2P01877 340 aa16.23■□□□□ 0.19
BEST1-204ENST00000524926 FCGRTP55899 365 aa16.23■□□□□ 0.19
BEST1-204ENST00000524926 GNASQ5JWF2 1037 aa16.23■□□□□ 0.19
BEST1-204ENST00000524926 DAB2IPQ5VWQ8 1189 aa16.23■□□□□ 0.19
BEST1-204ENST00000524926 EMBQ6PCB8 327 aa16.23■□□□□ 0.19
BEST1-204ENST00000524926 NT5DC4Q86YG4 428 aa16.23■□□□□ 0.19
BEST1-204ENST00000524926 TRPV1Q8NER1 839 aa16.23■□□□□ 0.19
BEST1-204ENST00000524926 TMEM40Q8WWA1 233 aa16.23■□□□□ 0.19
BEST1-204ENST00000524926 FAXDC2Q96IV6 333 aa16.23■□□□□ 0.19
BEST1-204ENST00000524926 APOL6Q9BWW8 343 aa16.23■□□□□ 0.19
BEST1-204ENST00000524926 CELF4Q9BZC1 486 aaKnown RBP16.23■□□□□ 0.19
BEST1-204ENST00000524926 CXCL16Q9H2A7 254 aa16.23■□□□□ 0.19
BEST1-204ENST00000524926 PLEKHA5Q9HAU0 1116 aa16.23■□□□□ 0.19
BEST1-204ENST00000524926 ERVK-5Q9HDB9 667 aa16.23■□□□□ 0.19
BEST1-204ENST00000524926 HPCAL4Q9UM19 191 aa16.23■□□□□ 0.19
BEST1-204ENST00000524926 PCDHGC3Q9UN70 934 aa16.23■□□□□ 0.19
BEST1-204ENST00000524926 PIN4Q9Y237 131 aaKnown RBP16.23■□□□□ 0.19
BEST1-204ENST00000524926 MYADML2A6NDP7 307 aa16.23■□□□□ 0.19
BEST1-204ENST00000524926 DUSP11O75319 330 aaKnown RBP16.23■□□□□ 0.19
BEST1-204ENST00000524926 PROSCO94903 275 aa16.23■□□□□ 0.19
BEST1-204ENST00000524926 CALB1P05937 261 aa16.23■□□□□ 0.19
BEST1-204ENST00000524926 GNAT1P11488 350 aa16.23■□□□□ 0.19
BEST1-204ENST00000524926 RAD23BP54727 409 aa16.23■□□□□ 0.19
BEST1-204ENST00000524926 SNX17Q15036 470 aa16.23■□□□□ 0.19
BEST1-204ENST00000524926 LLGL1Q15334 1064 aa16.23■□□□□ 0.19
BEST1-204ENST00000524926 PCBP1Q15365 356 aaKnown RBP eCLIP16.23■□□□□ 0.19
BEST1-204ENST00000524926 ERICH1Q86X53 443 aa16.23■□□□□ 0.19
BEST1-204ENST00000524926 WDTC1Q8N5D0 677 aa16.23■□□□□ 0.19
BEST1-204ENST00000524926 FEZF2Q8TBJ5 459 aa16.23■□□□□ 0.19
BEST1-204ENST00000524926 PLVAPQ9BX97 442 aa16.23■□□□□ 0.19
BEST1-204ENST00000524926 VRTNQ9H8Y1 702 aa16.23■□□□□ 0.19
BEST1-204ENST00000524926 GABRQQ9UN88 632 aa16.23■□□□□ 0.19
BEST1-204ENST00000524926 HLTFQ14527 1009 aaKnown RBP eCLIP16.22■□□□□ 0.19
BEST1-204ENST00000524926 PPP2R5EQ16537 467 aa16.22■□□□□ 0.19
BEST1-204ENST00000524926 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms