RNA–Protein interactions for RNA: ENST00000524773.5

CAPN1-202, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-202ENST00000524773 HEY2Q9UBP5 337 aa13.92□□□□□ -0.18
CAPN1-202ENST00000524773 SMAPO00193 183 aa13.92□□□□□ -0.18
CAPN1-202ENST00000524773 NPM3O75607 178 aaKnown RBP13.92□□□□□ -0.18
CAPN1-202ENST00000524773 KLRC2P26717 231 aa13.92□□□□□ -0.18
CAPN1-202ENST00000524773 MKRN3Q13064 507 aaKnown RBP13.92□□□□□ -0.18
CAPN1-202ENST00000524773 MTMR2Q13614 643 aa13.92□□□□□ -0.18
CAPN1-202ENST00000524773 ACVR2BQ13705 512 aa13.92□□□□□ -0.18
CAPN1-202ENST00000524773 ACSBG2Q5FVE4 666 aa13.92□□□□□ -0.18
CAPN1-202ENST00000524773 MFSD7Q6UXD7 560 aa13.92□□□□□ -0.18
CAPN1-202ENST00000524773 TMEM179Q6ZVK1 233 aa13.92□□□□□ -0.18
CAPN1-202ENST00000524773 CLNKQ7Z7G1 428 aa13.92□□□□□ -0.18
CAPN1-202ENST00000524773 FLAD1Q8NFF5 587 aa13.92□□□□□ -0.18
CAPN1-202ENST00000524773 BSNDQ8WZ55 320 aa13.92□□□□□ -0.18
CAPN1-202ENST00000524773 PLVAPQ9BX97 442 aa13.92□□□□□ -0.18
CAPN1-202ENST00000524773 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.92□□□□□ -0.18
CAPN1-202ENST00000524773 C2CD2Q9Y426 696 aa13.92□□□□□ -0.18
CAPN1-202ENST00000524773 UMODL1Q5DID0 1318 aa13.92□□□□□ -0.18
CAPN1-202ENST00000524773 ZNFX1Q9P2E3 1918 aaKnown RBP13.92□□□□□ -0.18
CAPN1-202ENST00000524773 CLRN2A0PK11 232 aa13.92□□□□□ -0.18
CAPN1-202ENST00000524773 TCP10L2B9ZVM9 353 aa13.92□□□□□ -0.18
CAPN1-202ENST00000524773 UBTFL6P0CB48 400 aaPredicted RBP13.92□□□□□ -0.18
CAPN1-202ENST00000524773 ATP6V1C1P21283 382 aa13.92□□□□□ -0.18
CAPN1-202ENST00000524773 SERPINB3P29508 390 aa13.92□□□□□ -0.18
CAPN1-202ENST00000524773 NSFP46459 744 aaKnown RBP13.92□□□□□ -0.18
CAPN1-202ENST00000524773 ZNF394Q53GI3 561 aa13.92□□□□□ -0.18
CAPN1-202ENST00000524773 ANKRD22Q5VYY1 191 aa13.92□□□□□ -0.18
CAPN1-202ENST00000524773 AGGF1Q8N302 714 aaeCLIP13.92□□□□□ -0.18
CAPN1-202ENST00000524773 FBXL13Q8NEE6 735 aa13.92□□□□□ -0.18
CAPN1-202ENST00000524773 CLPTM1LQ96KA5 538 aa13.92□□□□□ -0.18
CAPN1-202ENST00000524773 COA1Q9GZY4 146 aa13.92□□□□□ -0.18
CAPN1-202ENST00000524773 ZNF395Q9H8N7 513 aaPredicted RBP13.92□□□□□ -0.18
CAPN1-202ENST00000524773 MYPNQ86TC9 1320 aa13.91□□□□□ -0.18
CAPN1-202ENST00000524773 DENND3A2RUS2 1198 aa13.91□□□□□ -0.18
CAPN1-202ENST00000524773 NFIBO00712 420 aa13.91□□□□□ -0.18
CAPN1-202ENST00000524773 CAPN9O14815 690 aa13.91□□□□□ -0.18
CAPN1-202ENST00000524773 UNGP13051 313 aaPredicted RBP13.91□□□□□ -0.18
CAPN1-202ENST00000524773 ALCAMQ13740 583 aa13.91□□□□□ -0.18
CAPN1-202ENST00000524773 SMTNL2Q2TAL5 461 aa13.91□□□□□ -0.18
CAPN1-202ENST00000524773 SLC39A4Q6P5W5 647 aa13.91□□□□□ -0.18
CAPN1-202ENST00000524773 ISLR2Q6UXK2 745 aa13.91□□□□□ -0.18
CAPN1-202ENST00000524773 RINLQ6ZS11 566 aa13.91□□□□□ -0.18
CAPN1-202ENST00000524773 CCNJLQ8IV13 435 aa13.91□□□□□ -0.18
CAPN1-202ENST00000524773 CCDC89Q8N998 374 aa13.91□□□□□ -0.18
CAPN1-202ENST00000524773 TCP10LQ8TDR4 215 aa13.91□□□□□ -0.18
CAPN1-202ENST00000524773 GRK7Q8WTQ7 553 aa13.91□□□□□ -0.18
CAPN1-202ENST00000524773 SCG3Q8WXD2 468 aaKnown RBP13.91□□□□□ -0.18
CAPN1-202ENST00000524773 SLCO2A1Q92959 643 aa13.91□□□□□ -0.18
CAPN1-202ENST00000524773 CSRNP1Q96S65 589 aa13.91□□□□□ -0.18
CAPN1-202ENST00000524773 ATRNL1Q5VV63 1379 aa13.91□□□□□ -0.18
CAPN1-202ENST00000524773 LRRD1A4D1F6 860 aa13.91□□□□□ -0.18
CAPN1-202ENST00000524773 KLRG2A4D1S0 409 aaPredicted RBP13.91□□□□□ -0.18
CAPN1-202ENST00000524773 ZCCHC18P0CG32 403 aa13.91□□□□□ -0.18
CAPN1-202ENST00000524773 RFX1P22670 979 aa13.91□□□□□ -0.18
CAPN1-202ENST00000524773 ALDH3A1P30838 453 aa13.91□□□□□ -0.18
CAPN1-202ENST00000524773 YWHABP31946 246 aaKnown RBP13.91□□□□□ -0.18
CAPN1-202ENST00000524773 NR1H3Q13133 447 aa13.91□□□□□ -0.18
CAPN1-202ENST00000524773 PDK4Q16654 411 aa13.91□□□□□ -0.18
CAPN1-202ENST00000524773 XKR9Q5GH70 373 aa13.91□□□□□ -0.18
CAPN1-202ENST00000524773 PPP1R15BQ5SWA1 713 aa13.91□□□□□ -0.18
CAPN1-202ENST00000524773 SNX30Q5VWJ9 437 aa13.91□□□□□ -0.18
CAPN1-202ENST00000524773 FOXB2Q5VYV0 432 aa13.91□□□□□ -0.18
CAPN1-202ENST00000524773 LRRN4Q8WUT4 740 aa13.91□□□□□ -0.18
CAPN1-202ENST00000524773 ZNF516Q92618 1163 aa13.91□□□□□ -0.18
CAPN1-202ENST00000524773 TMEM206Q9H813 350 aa13.91□□□□□ -0.18
CAPN1-202ENST00000524773 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.91□□□□□ -0.18
CAPN1-202ENST00000524773 TCRBV7S3A2A0A539 114 aa13.9□□□□□ -0.18
CAPN1-202ENST00000524773 F8VP50 259 aa13.9□□□□□ -0.18
CAPN1-202ENST00000524773 SGK1O00141 431 aa13.9□□□□□ -0.18
CAPN1-202ENST00000524773 PIK3CDO00329 1044 aa13.9□□□□□ -0.18
CAPN1-202ENST00000524773 NVLO15381 856 aaKnown RBP13.9□□□□□ -0.18
CAPN1-202ENST00000524773 TLR3O15455 904 aaKnown RBP13.9□□□□□ -0.18
CAPN1-202ENST00000524773 ATP9AO75110 1047 aa13.9□□□□□ -0.18
CAPN1-202ENST00000524773 LUC7L3O95232 432 aaKnown RBP13.9□□□□□ -0.18
CAPN1-202ENST00000524773 NEFHP12036 1026 aa13.9□□□□□ -0.18
CAPN1-202ENST00000524773 SP100P23497 879 aaPredicted RBP13.9□□□□□ -0.18
CAPN1-202ENST00000524773 ACOT2P49753 483 aa13.9□□□□□ -0.18
CAPN1-202ENST00000524773 GPX6P59796 221 aa13.9□□□□□ -0.18
CAPN1-202ENST00000524773 SEPT7Q16181 437 aaKnown RBP13.9□□□□□ -0.18
CAPN1-202ENST00000524773 PARP6Q2NL67 630 aa13.9□□□□□ -0.18
CAPN1-202ENST00000524773 C4orf50Q6ZRC1 276 aa13.9□□□□□ -0.18
CAPN1-202ENST00000524773 NLRX1Q86UT6 975 aa13.9□□□□□ -0.18
CAPN1-202ENST00000524773 LMNTD2Q8IXW0 634 aa13.9□□□□□ -0.18
CAPN1-202ENST00000524773 KBTBD2Q8IY47 623 aa13.9□□□□□ -0.18
CAPN1-202ENST00000524773 ZCCHC9Q8N567 271 aaKnown RBP13.9□□□□□ -0.18
CAPN1-202ENST00000524773 SLC25A41Q8N5S1 370 aa13.9□□□□□ -0.18
CAPN1-202ENST00000524773 KCTD17Q8N5Z5 321 aa13.9□□□□□ -0.18
CAPN1-202ENST00000524773 MORC4Q8TE76 937 aa13.9□□□□□ -0.18
CAPN1-202ENST00000524773 PAPOLBQ9NRJ5 636 aaKnown RBP13.9□□□□□ -0.18
CAPN1-202ENST00000524773 IVNS1ABPQ9Y6Y0 642 aa13.9□□□□□ -0.18
CAPN1-202ENST00000524773 TBX10O75333 385 aa13.9□□□□□ -0.18
CAPN1-202ENST00000524773 MYCLP12524 364 aaPredicted RBP13.9□□□□□ -0.18
CAPN1-202ENST00000524773 EIF2AK2P19525 551 aaKnown RBP13.9□□□□□ -0.18
CAPN1-202ENST00000524773 AMPD1P23109 780 aa13.9□□□□□ -0.18
CAPN1-202ENST00000524773 MARK3P27448 753 aa13.9□□□□□ -0.18
CAPN1-202ENST00000524773 SKIV2L2P42285 1042 aaKnown RBP13.9□□□□□ -0.18
CAPN1-202ENST00000524773 NEK3P51956 506 aa13.9□□□□□ -0.18
CAPN1-202ENST00000524773 CCNG1P51959 295 aa13.9□□□□□ -0.18
CAPN1-202ENST00000524773 GDF10P55107 478 aa13.9□□□□□ -0.18
CAPN1-202ENST00000524773 ZBTB16Q05516 673 aa13.9□□□□□ -0.18
CAPN1-202ENST00000524773 TCEAL1Q15170 157 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms