RNA–Protein interactions for RNA: ENST00000524602.5

CHD7-202, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 1 (best) BASIC

Gene CHD7, Length 3,456 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-202ENST00000524602 COL11A1P12107 1806 aaPredicted RBP8.8□□□□□ -1
CHD7-202ENST00000524602 DNALI1O14645 258 aaPredicted RBP8.79□□□□□ -1
CHD7-202ENST00000524602 TLR3O15455 904 aaKnown RBP8.79□□□□□ -1
CHD7-202ENST00000524602 MAGEB2O15479 319 aa8.79□□□□□ -1
CHD7-202ENST00000524602 PRPF4O43172 522 aaKnown RBP eCLIP8.79□□□□□ -1
CHD7-202ENST00000524602 LIASO43766 372 aa8.79□□□□□ -1
CHD7-202ENST00000524602 UBOX5O94941 541 aa8.79□□□□□ -1
CHD7-202ENST00000524602 VNN1O95497 513 aa8.79□□□□□ -1
CHD7-202ENST00000524602 ALADP13716 330 aa8.79□□□□□ -1
CHD7-202ENST00000524602 NQO1P15559 274 aaKnown RBP8.79□□□□□ -1
CHD7-202ENST00000524602 MAGEA4P43358 317 aa8.79□□□□□ -1
CHD7-202ENST00000524602 NCALDP61601 193 aa8.79□□□□□ -1
CHD7-202ENST00000524602 SATB1Q01826 763 aa8.79□□□□□ -1
CHD7-202ENST00000524602 GRM1Q13255 1194 aa8.79□□□□□ -1
CHD7-202ENST00000524602 EMC2Q15006 297 aa8.79□□□□□ -1
CHD7-202ENST00000524602 TRIP13Q15645 432 aaPredicted RBP8.79□□□□□ -1
CHD7-202ENST00000524602 RGS9BPQ6ZS82 235 aa8.79□□□□□ -1
CHD7-202ENST00000524602 GSTA5Q7RTV2 222 aa8.79□□□□□ -1
CHD7-202ENST00000524602 EGFL6Q8IUX8 553 aa8.79□□□□□ -1
CHD7-202ENST00000524602 MGARPQ8TDB4 240 aa8.79□□□□□ -1
CHD7-202ENST00000524602 RBM15Q96T37 977 aaKnown RBP eCLIP8.79□□□□□ -13e-6■■■■□ 19.9
CHD7-202ENST00000524602 C11orf70Q9BRQ4 267 aa8.79□□□□□ -1
CHD7-202ENST00000524602 RBAKQ9NYW8 714 aaPredicted RBP8.79□□□□□ -1
CHD7-202ENST00000524602 KLHL14Q9P2G3 628 aa8.79□□□□□ -1
CHD7-202ENST00000524602 CD2APQ9Y5K6 639 aa8.79□□□□□ -1
CHD7-202ENST00000524602 RLFQ13129 1914 aa8.79□□□□□ -1
CHD7-202ENST00000524602 GSTTP1A0A1W2PQM5 241 aa8.79□□□□□ -1
CHD7-202ENST00000524602 FAM47DPA6NHR8 397 aa8.79□□□□□ -1
CHD7-202ENST00000524602 DSG3P32926 999 aa8.79□□□□□ -1
CHD7-202ENST00000524602 NF2P35240 595 aa8.79□□□□□ -1
CHD7-202ENST00000524602 GMPSP49915 693 aaPredicted RBP8.79□□□□□ -1
CHD7-202ENST00000524602 ZNF132P52740 706 aa8.79□□□□□ -1
CHD7-202ENST00000524602 TAS2R40P59535 323 aa8.79□□□□□ -1
CHD7-202ENST00000524602 ACTR2P61160 394 aa8.79□□□□□ -1
CHD7-202ENST00000524602 MTMR2Q13614 643 aa8.79□□□□□ -1
CHD7-202ENST00000524602 MORF4L2Q15014 288 aa8.79□□□□□ -1
CHD7-202ENST00000524602 FAM133BQ5BKY9 247 aaKnown RBP8.79□□□□□ -1
CHD7-202ENST00000524602 TMEM270Q6UE05 265 aa8.79□□□□□ -1
CHD7-202ENST00000524602 TRMT1LQ7Z2T5 733 aaKnown RBP8.79□□□□□ -1
CHD7-202ENST00000524602 CCDC125Q86Z20 511 aa8.79□□□□□ -1
CHD7-202ENST00000524602 MICALL2Q8IY33 904 aa8.79□□□□□ -1
CHD7-202ENST00000524602 ANKRD42Q8N9B4 389 aa8.79□□□□□ -1
CHD7-202ENST00000524602 RBBP8NLQ8NC74 664 aaPredicted RBP8.79□□□□□ -1
CHD7-202ENST00000524602 HEMGNQ9BXL5 484 aa8.79□□□□□ -1
CHD7-202ENST00000524602 ZNF518BQ9C0D4 1074 aa8.79□□□□□ -1
CHD7-202ENST00000524602 PORCNQ9H237 461 aa8.79□□□□□ -1
CHD7-202ENST00000524602 TMEM134Q9H6X4 195 aa8.79□□□□□ -1
CHD7-202ENST00000524602 ECT2Q9H8V3 914 aa8.79□□□□□ -1
CHD7-202ENST00000524602 DDX56Q9NY93 547 aaKnown RBP8.79□□□□□ -1
CHD7-202ENST00000524602 CTNNAL1Q9UBT7 734 aa8.79□□□□□ -1
CHD7-202ENST00000524602 SMG5Q9UPR3 1016 aaKnown RBP8.79□□□□□ -1
CHD7-202ENST00000524602 GJA3Q9Y6H8 435 aa8.79□□□□□ -1
CHD7-202ENST00000524602 SPATA31C2B4DYI2 1134 aa8.79□□□□□ -1
CHD7-202ENST00000524602 ATP2A1O14983 1001 aa8.79□□□□□ -1
CHD7-202ENST00000524602 SUPT20HL2P0C7V6 817 aa8.79□□□□□ -1
CHD7-202ENST00000524602 MMP8P22894 467 aa8.79□□□□□ -1
CHD7-202ENST00000524602 POLGP54098 1239 aaPredicted RBP8.79□□□□□ -1
CHD7-202ENST00000524602 SOX10P56693 466 aa8.79□□□□□ -1
CHD7-202ENST00000524602 NLRP11P59045 1033 aaKnown RBP8.79□□□□□ -1
CHD7-202ENST00000524602 DGKZQ13574 1117 aa8.79□□□□□ -1
CHD7-202ENST00000524602 P3H1Q32P28 736 aa8.79□□□□□ -1
CHD7-202ENST00000524602 SUPT20HL1Q3ZLR7 823 aa8.79□□□□□ -1
CHD7-202ENST00000524602 CHADLQ6NUI6 762 aa8.79□□□□□ -1
CHD7-202ENST00000524602 CCDC60Q8IWA6 550 aaPredicted RBP8.79□□□□□ -1
CHD7-202ENST00000524602 ALLCQ8N6M5 410 aa8.79□□□□□ -1
CHD7-202ENST00000524602 REPS2Q8NFH8 660 aa8.79□□□□□ -1
CHD7-202ENST00000524602 MAML1Q92585 1016 aa8.79□□□□□ -1
CHD7-202ENST00000524602 SLITRK1Q96PX8 696 aa8.79□□□□□ -1
CHD7-202ENST00000524602 SGIP1Q9BQI5 828 aa8.79□□□□□ -1
CHD7-202ENST00000524602 FRMD8P1Q9BZ68 369 aaPredicted RBP8.79□□□□□ -1
CHD7-202ENST00000524602 IMPG2Q9BZV3 1241 aa8.79□□□□□ -1
CHD7-202ENST00000524602 AS3MTQ9HBK9 375 aa8.79□□□□□ -1
CHD7-202ENST00000524602 FETUBQ9UGM5 382 aa8.79□□□□□ -1
CHD7-202ENST00000524602 STARD13Q9Y3M8 1113 aa8.79□□□□□ -1
CHD7-202ENST00000524602 SSC5DA1L4H1 1573 aa8.79□□□□□ -1
CHD7-202ENST00000524602 RASA4BC9J798 803 aa8.78□□□□□ -1
CHD7-202ENST00000524602 RASA4O43374 803 aa8.78□□□□□ -1
CHD7-202ENST00000524602 ATP5HO75947 161 aa8.78□□□□□ -1
CHD7-202ENST00000524602 CCNB1P14635 433 aa8.78□□□□□ -1
CHD7-202ENST00000524602 CREB1P16220 341 aa8.78□□□□□ -1
CHD7-202ENST00000524602 RPS12P25398 132 aaKnown RBP8.78□□□□□ -1
CHD7-202ENST00000524602 NOP14P78316 857 aaKnown RBP8.78□□□□□ -1
CHD7-202ENST00000524602 CCDC142Q17RM4 750 aa8.78□□□□□ -1
CHD7-202ENST00000524602 CEP57Q86XR8 500 aa8.78□□□□□ -1
CHD7-202ENST00000524602 SRRM1Q8IYB3 904 aaKnown RBP8.78□□□□□ -1
CHD7-202ENST00000524602 UBR7Q8N806 425 aa8.78□□□□□ -1
CHD7-202ENST00000524602 DHX33Q9H6R0 707 aaKnown RBP8.78□□□□□ -1
CHD7-202ENST00000524602 APOBEC3GQ9HC16 384 aaKnown RBP8.78□□□□□ -1
CHD7-202ENST00000524602 ARHGEF3Q9NR81 526 aa8.78□□□□□ -1
CHD7-202ENST00000524602 ADAMTS5Q9UNA0 930 aa8.78□□□□□ -1
CHD7-202ENST00000524602 SHOC2Q9UQ13 582 aa8.78□□□□□ -1
CHD7-202ENST00000524602 MAFBQ9Y5Q3 323 aaPredicted RBP8.78□□□□□ -1
CHD7-202ENST00000524602 DOCK5Q9H7D0 1870 aa8.78□□□□□ -1
CHD7-202ENST00000524602 A0A0B4J269 797 aa8.78□□□□□ -1
CHD7-202ENST00000524602 EXOC1LA0A1B0GW35 172 aa8.78□□□□□ -1
CHD7-202ENST00000524602 TMEM191CA6NGB0 347 aa8.78□□□□□ -1
CHD7-202ENST00000524602 RGS20O76081 388 aa8.78□□□□□ -1
CHD7-202ENST00000524602 ITGAVP06756 1048 aa8.78□□□□□ -1
CHD7-202ENST00000524602 TMEM191BP0C7N4 346 aa8.78□□□□□ -1
CHD7-202ENST00000524602 MPP2Q14168 576 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms