RNA–Protein interactions for RNA: ENST00000524361.5

LINC00534-204, long intergenic non-protein coding RNA 534, humanhuman

TSL 3

Gene LINC00534, Length 620 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00534-204ENST00000524361 KXD1Q9BQD3 176 aa6.78□□□□□ -1.32
LINC00534-204ENST00000524361 RTP3Q9BQQ7 232 aa6.78□□□□□ -1.32
LINC00534-204ENST00000524361 LLPHQ9BRT6 129 aaKnown RBP6.78□□□□□ -1.32
LINC00534-204ENST00000524361 PLA2G2FQ9BZM2 168 aa6.78□□□□□ -1.32
LINC00534-204ENST00000524361 OSBPL2Q9H1P3 480 aa6.78□□□□□ -1.32
LINC00534-204ENST00000524361 CDT1Q9H211 546 aa6.78□□□□□ -1.32
LINC00534-204ENST00000524361 ACBD3Q9H3P7 528 aa6.78□□□□□ -1.32
LINC00534-204ENST00000524361 PTPRHQ9HD43 1115 aa6.78□□□□□ -1.32
LINC00534-204ENST00000524361 KMT5AQ9NQR1 393 aa6.78□□□□□ -1.32
LINC00534-204ENST00000524361 FBXW11Q9UKB1 542 aa6.78□□□□□ -1.32
LINC00534-204ENST00000524361 CDH7Q9ULB5 785 aa6.78□□□□□ -1.32
LINC00534-204ENST00000524361 NOL7Q9UMY1 257 aaKnown RBP6.78□□□□□ -1.32
LINC00534-204ENST00000524361 DNM3Q9UQ16 869 aa6.78□□□□□ -1.32
LINC00534-204ENST00000524361 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.78□□□□□ -1.32
LINC00534-204ENST00000524361 SIT1Q9Y3P8 196 aa6.78□□□□□ -1.32
LINC00534-204ENST00000524361 RBM19Q9Y4C8 960 aaKnown RBP6.78□□□□□ -1.32
LINC00534-204ENST00000524361 MYH9P35579 1960 aaKnown RBP6.78□□□□□ -1.32
LINC00534-204ENST00000524361 MYO15AQ9UKN7 3530 aa6.78□□□□□ -1.32
LINC00534-204ENST00000524361 PODXLO00592 558 aa6.77□□□□□ -1.33
LINC00534-204ENST00000524361 MEFVO15553 781 aaPredicted RBP6.77□□□□□ -1.33
LINC00534-204ENST00000524361 XYLBO75191 536 aa6.77□□□□□ -1.33
LINC00534-204ENST00000524361 SEC24AO95486 1093 aa6.77□□□□□ -1.33
LINC00534-204ENST00000524361 RHOP08100 348 aa6.77□□□□□ -1.33
LINC00534-204ENST00000524361 HNRNPA1P09651 372 aaKnown RBP eCLIP6.77□□□□□ -1.33
LINC00534-204ENST00000524361 GLULP15104 373 aa6.77□□□□□ -1.33
LINC00534-204ENST00000524361 LORP23490 312 aaPredicted RBP6.77□□□□□ -1.33
LINC00534-204ENST00000524361 U2AF2P26368 475 aaKnown RBP eCLIP6.77□□□□□ -1.332e-10■■■■■ 28.9
LINC00534-204ENST00000524361 GRM5P41594 1212 aa6.77□□□□□ -1.33
LINC00534-204ENST00000524361 YARSP54577 528 aaKnown RBP6.77□□□□□ -1.33
LINC00534-204ENST00000524361 DAB2P98082 770 aa6.77□□□□□ -1.33
LINC00534-204ENST00000524361 CREMQ03060 361 aa6.77□□□□□ -1.33
LINC00534-204ENST00000524361 PDIA5Q14554 519 aa6.77□□□□□ -1.33
LINC00534-204ENST00000524361 DHX8Q14562 1220 aaKnown RBP6.77□□□□□ -1.33
LINC00534-204ENST00000524361 SLC5A9Q2M3M2 681 aa6.77□□□□□ -1.33
LINC00534-204ENST00000524361 DCAF4L1Q3SXM0 396 aa6.77□□□□□ -1.33
LINC00534-204ENST00000524361 ZNF568Q3ZCX4 644 aa6.77□□□□□ -1.33
LINC00534-204ENST00000524361 SLC44A4Q53GD3 710 aa6.77□□□□□ -1.33
LINC00534-204ENST00000524361 KRT79Q5XKE5 535 aa6.77□□□□□ -1.33
LINC00534-204ENST00000524361 HAUS3Q68CZ6 603 aa6.77□□□□□ -1.33
LINC00534-204ENST00000524361 RINT1Q6NUQ1 792 aa6.77□□□□□ -1.33
LINC00534-204ENST00000524361 ALKAL1Q6UXT8 129 aa6.77□□□□□ -1.33
LINC00534-204ENST00000524361 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.77□□□□□ -1.33
LINC00534-204ENST00000524361 DTHD1Q6ZMT9 781 aa6.77□□□□□ -1.33
LINC00534-204ENST00000524361 C1orf186Q6ZWK4 172 aa6.77□□□□□ -1.33
LINC00534-204ENST00000524361 GPR65Q8IYL9 337 aa6.77□□□□□ -1.33
LINC00534-204ENST00000524361 NXPE3Q969Y0 559 aa6.77□□□□□ -1.33
LINC00534-204ENST00000524361 ZSCAN31Q96LW9 406 aaPredicted RBP6.77□□□□□ -1.33
LINC00534-204ENST00000524361 ACAP3Q96P50 834 aa6.77□□□□□ -1.33
LINC00534-204ENST00000524361 CITED4Q96RK1 184 aa6.77□□□□□ -1.33
LINC00534-204ENST00000524361 MMTAG2Q9BU76 263 aaKnown RBP6.77□□□□□ -1.33
LINC00534-204ENST00000524361 CCDC94Q9BW85 323 aaPredicted RBP6.77□□□□□ -1.33
LINC00534-204ENST00000524361 RHOBTB2Q9BYZ6 727 aa6.77□□□□□ -1.33
LINC00534-204ENST00000524361 ARHGEF3Q9NR81 526 aa6.77□□□□□ -1.33
LINC00534-204ENST00000524361 MTRRQ9UBK8 725 aa6.77□□□□□ -1.33
LINC00534-204ENST00000524361 STK17AQ9UEE5 414 aa6.77□□□□□ -1.33
LINC00534-204ENST00000524361 FKBPLQ9UIM3 349 aa6.77□□□□□ -1.33
LINC00534-204ENST00000524361 TNFSF13BQ9Y275 285 aa6.77□□□□□ -1.33
LINC00534-204ENST00000524361 MRPS23Q9Y3D9 190 aaKnown RBP6.77□□□□□ -1.33
LINC00534-204ENST00000524361 TIMM13Q9Y5L4 95 aaPredicted RBP6.77□□□□□ -1.33
LINC00534-204ENST00000524361 DMDP11532 3685 aa6.77□□□□□ -1.33
LINC00534-204ENST00000524361 FAM170BA6NMN3 283 aa6.76□□□□□ -1.33
LINC00534-204ENST00000524361 PRRG1O14668 218 aa6.76□□□□□ -1.33
LINC00534-204ENST00000524361 TRAPPC3O43617 180 aa6.76□□□□□ -1.33
LINC00534-204ENST00000524361 FAM13AO94988 1023 aa6.76□□□□□ -1.33
LINC00534-204ENST00000524361 PAPLNO95428 1278 aa6.76□□□□□ -1.33
LINC00534-204ENST00000524361 ADH1CP00326 375 aa6.76□□□□□ -1.33
LINC00534-204ENST00000524361 C1RP00736 705 aa6.76□□□□□ -1.33
LINC00534-204ENST00000524361 SP9P0CG40 484 aa6.76□□□□□ -1.33
LINC00534-204ENST00000524361 GJA1P17302 382 aa6.76□□□□□ -1.33
LINC00534-204ENST00000524361 ELF1P32519 619 aa6.76□□□□□ -1.33
LINC00534-204ENST00000524361 GMPRP36959 345 aa6.76□□□□□ -1.33
LINC00534-204ENST00000524361 MATR3P43243 847 aaKnown RBP eCLIP6.76□□□□□ -1.331e-6■■■■□ 21.3
LINC00534-204ENST00000524361 TRAPPC10P48553 1259 aa6.76□□□□□ -1.33
LINC00534-204ENST00000524361 GUCY2FP51841 1108 aa6.76□□□□□ -1.33
LINC00534-204ENST00000524361 WDR4P57081 412 aaKnown RBP6.76□□□□□ -1.33
LINC00534-204ENST00000524361 HMGN5P82970 282 aaKnown RBP6.76□□□□□ -1.33
LINC00534-204ENST00000524361 INSM1Q01101 510 aaPredicted RBP6.76□□□□□ -1.33
LINC00534-204ENST00000524361 ELAVL2Q12926 359 aaKnown RBP6.76□□□□□ -1.33
LINC00534-204ENST00000524361 MAPK7Q13164 816 aa6.76□□□□□ -1.33
LINC00534-204ENST00000524361 DMP1Q13316 513 aaPredicted RBP6.76□□□□□ -1.33
LINC00534-204ENST00000524361 UBXN2BQ14CS0 331 aa6.76□□□□□ -1.33
LINC00534-204ENST00000524361 SLC10A6Q3KNW5 377 aa6.76□□□□□ -1.33
LINC00534-204ENST00000524361 PABPC1LQ4VXU2 614 aaKnown RBP6.76□□□□□ -1.33
LINC00534-204ENST00000524361 TANGO2Q6ICL3 276 aa6.76□□□□□ -1.33
LINC00534-204ENST00000524361 MRPL14Q6P1L8 145 aaKnown RBP6.76□□□□□ -1.33
LINC00534-204ENST00000524361 ANKS3Q6ZW76 656 aa6.76□□□□□ -1.33
LINC00534-204ENST00000524361 C1orf210Q8IVY1 113 aa6.76□□□□□ -1.33
LINC00534-204ENST00000524361 NPAS3Q8IXF0 933 aa6.76□□□□□ -1.33
LINC00534-204ENST00000524361 DCLK2Q8N568 766 aa6.76□□□□□ -1.33
LINC00534-204ENST00000524361 IGSF22Q8N9C0 903 aa6.76□□□□□ -1.33
LINC00534-204ENST00000524361 ZNF461Q8TAF7 563 aa6.76□□□□□ -1.33
LINC00534-204ENST00000524361 TCEAL4Q96EI5 215 aa6.76□□□□□ -1.33
LINC00534-204ENST00000524361 ZSWIM3Q96MP5 696 aa6.76□□□□□ -1.33
LINC00534-204ENST00000524361 PNMA5Q96PV4 448 aa6.76□□□□□ -1.33
LINC00534-204ENST00000524361 CORO1BQ9BR76 489 aa6.76□□□□□ -1.33
LINC00534-204ENST00000524361 MRPL4Q9BYD3 311 aaKnown RBP6.76□□□□□ -1.33
LINC00534-204ENST00000524361 HAPLN2Q9GZV7 340 aa6.76□□□□□ -1.33
LINC00534-204ENST00000524361 CYP4F11Q9HBI6 524 aa6.76□□□□□ -1.33
LINC00534-204ENST00000524361 SLC2A4RGQ9NR83 387 aa6.76□□□□□ -1.33
LINC00534-204ENST00000524361 DLGAP2Q9P1A6 1054 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms