RNA–Protein interactions for RNA: ENST00000524141.5

SPIDR-225, Transcript of scaffold protein involved in DNA repair, human

TSL 2

Gene SPIDR, Length 2,761 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-225	ENST00000524141	SLURP2	P0DP57	97 aa		10.84	□□□□□ -0.67
SPIDR-225	ENST00000524141	AR	P10275	920 aa		10.84	□□□□□ -0.67
SPIDR-225	ENST00000524141	KRT4	P19013	534 aa		10.84	□□□□□ -0.67
SPIDR-225	ENST00000524141	PHB	P35232	272 aa		10.84	□□□□□ -0.67
SPIDR-225	ENST00000524141	RAB27A	P51159	221 aa		10.84	□□□□□ -0.67
SPIDR-225	ENST00000524141	GEMIN4	P57678	1058 aa	Known RBP	10.84	□□□□□ -0.67
SPIDR-225	ENST00000524141	SLC34A1	Q06495	639 aa		10.84	□□□□□ -0.67
SPIDR-225	ENST00000524141	ENPEP	Q07075	957 aa		10.84	□□□□□ -0.67
SPIDR-225	ENST00000524141	CCDC142	Q17RM4	750 aa		10.84	□□□□□ -0.67
SPIDR-225	ENST00000524141	KHDC1	Q4VXA5	237 aa	Known RBP	10.84	□□□□□ -0.67
SPIDR-225	ENST00000524141	EFHC2	Q5JST6	749 aa		10.84	□□□□□ -0.67
SPIDR-225	ENST00000524141	TRIM72	Q6ZMU5	477 aa		10.84	□□□□□ -0.67
SPIDR-225	ENST00000524141	ZSWIM2	Q8NEG5	633 aa		10.84	□□□□□ -0.67
SPIDR-225	ENST00000524141	TAS1R2	Q8TE23	839 aa		10.84	□□□□□ -0.67
SPIDR-225	ENST00000524141	MCUR1	Q96AQ8	359 aa		10.84	□□□□□ -0.67
SPIDR-225	ENST00000524141	VCPIP1	Q96JH7	1222 aa		10.84	□□□□□ -0.67
SPIDR-225	ENST00000524141	MIPEP	Q99797	713 aa		10.84	□□□□□ -0.67
SPIDR-225	ENST00000524141	CADM1	Q9BY67	442 aa	Known RBP	10.84	□□□□□ -0.67
SPIDR-225	ENST00000524141	VPS11	Q9H270	941 aa		10.84	□□□□□ -0.67
SPIDR-225	ENST00000524141	SYNC	Q9H7C4	482 aa		10.84	□□□□□ -0.67
SPIDR-225	ENST00000524141	C1orf112	Q9NSG2	853 aa		10.84	□□□□□ -0.67
SPIDR-225	ENST00000524141	ZNF148	Q9UQR1	794 aa		10.84	□□□□□ -0.67
SPIDR-225	ENST00000524141	MYPN	Q86TC9	1320 aa		10.84	□□□□□ -0.67
SPIDR-225	ENST00000524141	GOLGA8IP	A6NC78	632 aa		10.83	□□□□□ -0.68
SPIDR-225	ENST00000524141	DDTL	A6NHG4	134 aa	Predicted RBP	10.83	□□□□□ -0.68
SPIDR-225	ENST00000524141	GOLGA8J	A6NMD2	632 aa		10.83	□□□□□ -0.68
SPIDR-225	ENST00000524141	GYG2	O15488	501 aa		10.83	□□□□□ -0.68
SPIDR-225	ENST00000524141	TJP3	O95049	919 aa		10.83	□□□□□ -0.68
SPIDR-225	ENST00000524141	CRK	P46108	304 aa		10.83	□□□□□ -0.68
SPIDR-225	ENST00000524141	RARRES1	P49788	294 aa		10.83	□□□□□ -0.68
SPIDR-225	ENST00000524141	TUB	P50607	506 aa		10.83	□□□□□ -0.68
SPIDR-225	ENST00000524141	ARSE	P51690	589 aa		10.83	□□□□□ -0.68
SPIDR-225	ENST00000524141	NCKAP1L	P55160	1127 aa		10.83	□□□□□ -0.68
SPIDR-225	ENST00000524141	SESN3	P58005	492 aa		10.83	□□□□□ -0.68
SPIDR-225	ENST00000524141	TCP10	Q12799	353 aa		10.83	□□□□□ -0.68
SPIDR-225	ENST00000524141	RCN2	Q14257	317 aa		10.83	□□□□□ -0.68
SPIDR-225	ENST00000524141	LRRC74B	Q6ZQY2	392 aa		10.83	□□□□□ -0.68
SPIDR-225	ENST00000524141	MON1B	Q7L1V2	547 aa		10.83	□□□□□ -0.68
SPIDR-225	ENST00000524141	SP8	Q8IXZ3	490 aa		10.83	□□□□□ -0.68
SPIDR-225	ENST00000524141	DHX38	Q92620	1227 aa	Known RBP	10.83	□□□□□ -0.68
SPIDR-225	ENST00000524141	IDI2	Q9BXS1	227 aa		10.83	□□□□□ -0.68
SPIDR-225	ENST00000524141	WDR35	Q9P2L0	1181 aa		10.83	□□□□□ -0.68
SPIDR-225	ENST00000524141	MRPL11	Q9Y3B7	192 aa	Known RBP	10.83	□□□□□ -0.68
SPIDR-225	ENST00000524141	C2CD2	Q9Y426	696 aa		10.83	□□□□□ -0.68
SPIDR-225	ENST00000524141	DNAJC6	O75061	913 aa		10.83	□□□□□ -0.68
SPIDR-225	ENST00000524141	NPM3	O75607	178 aa	Known RBP	10.83	□□□□□ -0.68
SPIDR-225	ENST00000524141	NFX1	Q12986	1120 aa	Known RBP	10.83	□□□□□ -0.68
SPIDR-225	ENST00000524141	OR52E8	Q6IFG1	317 aa		10.83	□□□□□ -0.68
SPIDR-225	ENST00000524141	CCDC62	Q6P9F0	684 aa		10.83	□□□□□ -0.68
SPIDR-225	ENST00000524141	ZBED8	Q8IZ13	594 aa		10.83	□□□□□ -0.68
SPIDR-225	ENST00000524141	RCOR2	Q8IZ40	523 aa		10.83	□□□□□ -0.68
SPIDR-225	ENST00000524141	ALLC	Q8N6M5	410 aa		10.83	□□□□□ -0.68
SPIDR-225	ENST00000524141	SCG3	Q8WXD2	468 aa	Known RBP	10.83	□□□□□ -0.68
SPIDR-225	ENST00000524141	CPA5	Q8WXQ8	436 aa		10.83	□□□□□ -0.68
SPIDR-225	ENST00000524141	PTCD3	Q96EY7	689 aa	Known RBP	10.83	□□□□□ -0.68
SPIDR-225	ENST00000524141	NSL1	Q96IY1	281 aa		10.83	□□□□□ -0.68
SPIDR-225	ENST00000524141	FAM118B	Q9BPY3	351 aa		10.83	□□□□□ -0.68
SPIDR-225	ENST00000524141	STX18	Q9P2W9	335 aa	Known RBP	10.83	□□□□□ -0.68
SPIDR-225	ENST00000524141	ZNF212	Q9UDV6	495 aa		10.83	□□□□□ -0.68
SPIDR-225	ENST00000524141	MAGEA13P	A6NCF6	341 aa		10.82	□□□□□ -0.68
SPIDR-225	ENST00000524141		A8MXQ7	604 aa		10.82	□□□□□ -0.68
SPIDR-225	ENST00000524141	CAPN9	O14815	690 aa		10.82	□□□□□ -0.68
SPIDR-225	ENST00000524141	PPEF1	O14829	653 aa	Predicted RBP	10.82	□□□□□ -0.68
SPIDR-225	ENST00000524141	SLC16A4	O15374	487 aa		10.82	□□□□□ -0.68
SPIDR-225	ENST00000524141	GSC2	O15499	205 aa		10.82	□□□□□ -0.68
SPIDR-225	ENST00000524141	GDF11	O95390	407 aa		10.82	□□□□□ -0.68
SPIDR-225	ENST00000524141	CYP1A1	P04798	512 aa	Predicted RBP	10.82	□□□□□ -0.68
SPIDR-225	ENST00000524141	RFC5	P40937	340 aa		10.82	□□□□□ -0.68
SPIDR-225	ENST00000524141	UBXN2A	P68543	259 aa		10.82	□□□□□ -0.68
SPIDR-225	ENST00000524141	MCL1	Q07820	350 aa		10.82	□□□□□ -0.68
SPIDR-225	ENST00000524141	GPS1	Q13098	491 aa		10.82	□□□□□ -0.68
SPIDR-225	ENST00000524141	KPNB1	Q14974	876 aa	Known RBP	10.82	□□□□□ -0.68
SPIDR-225	ENST00000524141	FASTKD3	Q14CZ7	662 aa	Known RBP	10.82	□□□□□ -0.68
SPIDR-225	ENST00000524141	PDCD2	Q16342	344 aa	Predicted RBP	10.82	□□□□□ -0.68
SPIDR-225	ENST00000524141	GSTA3	Q16772	222 aa		10.82	□□□□□ -0.68
SPIDR-225	ENST00000524141	MTHFD1L	Q6UB35	978 aa		10.82	□□□□□ -0.68
SPIDR-225	ENST00000524141	PCGF5	Q86SE9	256 aa		10.82	□□□□□ -0.68
SPIDR-225	ENST00000524141	VPS52	Q8N1B4	723 aa		10.82	□□□□□ -0.68
SPIDR-225	ENST00000524141	IFT43	Q96FT9	208 aa		10.82	□□□□□ -0.68
SPIDR-225	ENST00000524141	MXRA8	Q9BRK3	442 aa		10.82	□□□□□ -0.68
SPIDR-225	ENST00000524141	MAK16	Q9BXY0	300 aa	Known RBP	10.82	□□□□□ -0.68
SPIDR-225	ENST00000524141	FAM192A	Q9GZU8	254 aa		10.82	□□□□□ -0.68
SPIDR-225	ENST00000524141	DRG1	Q9Y295	367 aa	Known RBP	10.82	□□□□□ -0.68
SPIDR-225	ENST00000524141	MTO1	Q9Y2Z2	717 aa	Known RBP	10.82	□□□□□ -0.68
SPIDR-225	ENST00000524141	ZHX2	Q9Y6X8	837 aa		10.82	□□□□□ -0.68
SPIDR-225	ENST00000524141		A0A1W2PPM1	405 aa		10.82	□□□□□ -0.68
SPIDR-225	ENST00000524141	MAP3K7	O43318	606 aa		10.82	□□□□□ -0.68
SPIDR-225	ENST00000524141	RTN3	O95197	1032 aa	Predicted RBP	10.82	□□□□□ -0.68
SPIDR-225	ENST00000524141	LYPLA2	O95372	231 aa		10.82	□□□□□ -0.68
SPIDR-225	ENST00000524141	TGDS	O95455	350 aa		10.82	□□□□□ -0.68
SPIDR-225	ENST00000524141	PSMG1	O95456	288 aa		10.82	□□□□□ -0.68
SPIDR-225	ENST00000524141	CD58	P19256	250 aa		10.82	□□□□□ -0.68
SPIDR-225	ENST00000524141	QARS	P47897	775 aa	Known RBP	10.82	□□□□□ -0.68
SPIDR-225	ENST00000524141	PEX3	P56589	373 aa		10.82	□□□□□ -0.68
SPIDR-225	ENST00000524141	TAS2R40	P59535	323 aa		10.82	□□□□□ -0.68
SPIDR-225	ENST00000524141	AP1B1	Q10567	949 aa		10.82	□□□□□ -0.68
SPIDR-225	ENST00000524141	KRT72	Q14CN4	511 aa		10.82	□□□□□ -0.68
SPIDR-225	ENST00000524141	MAPK6	Q16659	721 aa		10.82	□□□□□ -0.68
SPIDR-225	ENST00000524141	KLHL38	Q2WGJ6	581 aa		10.82	□□□□□ -0.68
SPIDR-225	ENST00000524141	RFWD3	Q6PCD5	774 aa		10.82	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms