RNA–Protein interactions for RNA: ENST00000523504.5

TNFRSF10B-207, Transcript of TNF receptor superfamily member 10b, humanhuman

TSL 2

Gene TNFRSF10B, Length 1,464 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF10B-207ENST00000523504 UBE2TQ9NPD8 197 aaPredicted RBP23.18■■□□□ 1.3
TNFRSF10B-207ENST00000523504 NME7Q9Y5B8 376 aa23.18■■□□□ 1.3
TNFRSF10B-207ENST00000523504 A0A1W2PQC6 194 aa23.17■■□□□ 1.3
TNFRSF10B-207ENST00000523504 M0QZQ0 153 aa23.17■■□□□ 1.3
TNFRSF10B-207ENST00000523504 CSPG5O95196 566 aa23.17■■□□□ 1.3
TNFRSF10B-207ENST00000523504 ADCY5O95622 1261 aa23.17■■□□□ 1.3
TNFRSF10B-207ENST00000523504 WEE2P0C1S8 567 aa23.17■■□□□ 1.3
TNFRSF10B-207ENST00000523504 SMAD3P84022 425 aaKnown RBP23.17■■□□□ 1.3
TNFRSF10B-207ENST00000523504 FAM171A1Q5VUB5 890 aa23.17■■□□□ 1.3
TNFRSF10B-207ENST00000523504 RNF168Q8IYW5 571 aaPredicted RBP23.17■■□□□ 1.3
TNFRSF10B-207ENST00000523504 PDCL2Q8N4E4 241 aa23.17■■□□□ 1.3
TNFRSF10B-207ENST00000523504 TMEM169Q96HH4 297 aa23.17■■□□□ 1.3
TNFRSF10B-207ENST00000523504 TGS1Q96RS0 853 aaKnown RBP23.17■■□□□ 1.3
TNFRSF10B-207ENST00000523504 ALG13Q9NP73 1137 aaKnown RBP23.17■■□□□ 1.3
TNFRSF10B-207ENST00000523504 SF3B1O75533 1304 aaKnown RBP eCLIP23.17■■□□□ 1.31e-6■■■■■ 60.7
TNFRSF10B-207ENST00000523504 ERVK-21P61565 698 aa23.17■■□□□ 1.3
TNFRSF10B-207ENST00000523504 CUL2Q13617 745 aa23.17■■□□□ 1.3
TNFRSF10B-207ENST00000523504 WSCD1Q658N2 575 aa23.17■■□□□ 1.3
TNFRSF10B-207ENST00000523504 OSTM1Q86WC4 334 aa23.17■■□□□ 1.3
TNFRSF10B-207ENST00000523504 GPIHBP1Q8IV16 184 aa23.17■■□□□ 1.3
TNFRSF10B-207ENST00000523504 KBTBD7Q8WVZ9 684 aa23.17■■□□□ 1.3
TNFRSF10B-207ENST00000523504 TIFAQ96CG3 184 aa23.17■■□□□ 1.3
TNFRSF10B-207ENST00000523504 BCO2Q9BYV7 579 aa23.17■■□□□ 1.3
TNFRSF10B-207ENST00000523504 PLCB1Q9NQ66 1216 aa23.17■■□□□ 1.3
TNFRSF10B-207ENST00000523504 EPOPA6NHQ4 379 aa23.16■■□□□ 1.3
TNFRSF10B-207ENST00000523504 PNMA6AP0CW24 399 aaPredicted RBP23.16■■□□□ 1.3
TNFRSF10B-207ENST00000523504 UCHL3P15374 230 aa23.16■■□□□ 1.3
TNFRSF10B-207ENST00000523504 CD58P19256 250 aa23.16■■□□□ 1.3
TNFRSF10B-207ENST00000523504 DNAJB1P25685 340 aa23.16■■□□□ 1.3
TNFRSF10B-207ENST00000523504 ARHGAP44Q17R89 818 aa23.16■■□□□ 1.3
TNFRSF10B-207ENST00000523504 RTP2Q5QGT7 225 aa23.16■■□□□ 1.3
TNFRSF10B-207ENST00000523504 LIMS2Q7Z4I7 341 aa23.16■■□□□ 1.3
TNFRSF10B-207ENST00000523504 CEP57Q86XR8 500 aa23.16■■□□□ 1.3
TNFRSF10B-207ENST00000523504 VSTM4Q8IW00 320 aa23.16■■□□□ 1.3
TNFRSF10B-207ENST00000523504 NEK11Q8NG66 645 aa23.16■■□□□ 1.3
TNFRSF10B-207ENST00000523504 HMGXB4Q9UGU5 601 aa23.16■■□□□ 1.3
TNFRSF10B-207ENST00000523504 DNAJC12Q9UKB3 198 aa23.16■■□□□ 1.3
TNFRSF10B-207ENST00000523504 PCDHB8Q9UN66 801 aa23.16■■□□□ 1.3
TNFRSF10B-207ENST00000523504 A0A1W2PPC1 479 aa23.15■■□□□ 1.3
TNFRSF10B-207ENST00000523504 C5orf67F2Z3F1 127 aa23.15■■□□□ 1.3
TNFRSF10B-207ENST00000523504 RNF225M0QZC1 329 aaPredicted RBP23.15■■□□□ 1.3
TNFRSF10B-207ENST00000523504 SOX1O00570 391 aaPredicted RBP23.15■■□□□ 1.3
TNFRSF10B-207ENST00000523504 TPM3P06753 285 aa23.15■■□□□ 1.3
TNFRSF10B-207ENST00000523504 PPM1AP35813 382 aa23.15■■□□□ 1.3
TNFRSF10B-207ENST00000523504 POLR2FP61218 127 aaKnown RBP23.15■■□□□ 1.3
TNFRSF10B-207ENST00000523504 ORC1Q13415 861 aa23.15■■□□□ 1.3
TNFRSF10B-207ENST00000523504 LRIT3Q3SXY7 679 aa23.15■■□□□ 1.3
TNFRSF10B-207ENST00000523504 ADGRF2Q8IZF7 708 aa23.15■■□□□ 1.3
TNFRSF10B-207ENST00000523504 APPL2Q8NEU8 664 aa23.15■■□□□ 1.3
TNFRSF10B-207ENST00000523504 ARNTL2Q8WYA1 636 aa23.15■■□□□ 1.3
TNFRSF10B-207ENST00000523504 MRFAP1L1Q96HT8 127 aa23.15■■□□□ 1.3
TNFRSF10B-207ENST00000523504 NAA15Q9BXJ9 866 aaKnown RBP23.15■■□□□ 1.3
TNFRSF10B-207ENST00000523504 GPR88Q9GZN0 384 aa23.15■■□□□ 1.3
TNFRSF10B-207ENST00000523504 SLC28A3Q9HAS3 691 aa23.15■■□□□ 1.3
TNFRSF10B-207ENST00000523504 NLRC4Q9NPP4 1024 aa23.15■■□□□ 1.3
TNFRSF10B-207ENST00000523504 HUS1O60921 280 aa23.14■■□□□ 1.29
TNFRSF10B-207ENST00000523504 ODC1P11926 461 aa23.14■■□□□ 1.29
TNFRSF10B-207ENST00000523504 FGFR3P22607 806 aa23.14■■□□□ 1.29
TNFRSF10B-207ENST00000523504 PLCB3Q01970 1234 aa23.14■■□□□ 1.29
TNFRSF10B-207ENST00000523504 DDX53Q86TM3 631 aaKnown RBP23.14■■□□□ 1.29
TNFRSF10B-207ENST00000523504 TOP6BLQ8N6T0 577 aa23.14■■□□□ 1.29
TNFRSF10B-207ENST00000523504 AUTS2Q8WXX7 1259 aa23.14■■□□□ 1.29
TNFRSF10B-207ENST00000523504 TTYH3Q9C0H2 523 aa23.14■■□□□ 1.29
TNFRSF10B-207ENST00000523504 RWDD3Q9Y3V2 267 aa23.14■■□□□ 1.29
TNFRSF10B-207ENST00000523504 ITIH6Q6UXX5 1313 aa23.13■■□□□ 1.29
TNFRSF10B-207ENST00000523504 GRM6O15303 877 aa23.13■■□□□ 1.29
TNFRSF10B-207ENST00000523504 P4HA1P13674 534 aa23.13■■□□□ 1.29
TNFRSF10B-207ENST00000523504 ACO1P21399 889 aaKnown RBP23.13■■□□□ 1.29
TNFRSF10B-207ENST00000523504 MRE11P49959 708 aa23.13■■□□□ 1.29
TNFRSF10B-207ENST00000523504 GCNT1Q02742 428 aa23.13■■□□□ 1.29
TNFRSF10B-207ENST00000523504 RAPGEF1Q13905 1077 aa23.13■■□□□ 1.29
TNFRSF10B-207ENST00000523504 PRSS55Q6UWB4 352 aaPredicted RBP23.13■■□□□ 1.29
TNFRSF10B-207ENST00000523504 TMC6Q7Z403 805 aa23.13■■□□□ 1.29
TNFRSF10B-207ENST00000523504 UBR7Q8N806 425 aa23.13■■□□□ 1.29
TNFRSF10B-207ENST00000523504 TWNKQ96RR1 684 aa23.13■■□□□ 1.29
TNFRSF10B-207ENST00000523504 RTP3Q9BQQ7 232 aa23.13■■□□□ 1.29
TNFRSF10B-207ENST00000523504 HERC2P3Q9BVR0 1158 aa23.13■■□□□ 1.29
TNFRSF10B-207ENST00000523504 PLVAPQ9BX97 442 aa23.13■■□□□ 1.29
TNFRSF10B-207ENST00000523504 CISHQ9NSE2 258 aa23.13■■□□□ 1.29
TNFRSF10B-207ENST00000523504 PCDHGC5Q9Y5F6 944 aa23.13■■□□□ 1.29
TNFRSF10B-207ENST00000523504 TRIOBPQ9H2D6 2365 aa23.12■■□□□ 1.29
TNFRSF10B-207ENST00000523504 RFXAPO00287 272 aa23.12■■□□□ 1.29
TNFRSF10B-207ENST00000523504 C2CD2LO14523 706 aa23.12■■□□□ 1.29
TNFRSF10B-207ENST00000523504 TRAPPC3O43617 180 aa23.12■■□□□ 1.29
TNFRSF10B-207ENST00000523504 CALCAP01258 141 aa23.12■■□□□ 1.29
TNFRSF10B-207ENST00000523504 SOD2P04179 222 aa23.12■■□□□ 1.29
TNFRSF10B-207ENST00000523504 GYPCP04921 128 aa23.12■■□□□ 1.29
TNFRSF10B-207ENST00000523504 TRIM21P19474 475 aaKnown RBP23.12■■□□□ 1.29
TNFRSF10B-207ENST00000523504 LMO2P25791 158 aa23.12■■□□□ 1.29
TNFRSF10B-207ENST00000523504 CDR1P51861 262 aa23.12■■□□□ 1.29
TNFRSF10B-207ENST00000523504 VARS2Q5ST30 1063 aaKnown RBP23.12■■□□□ 1.29
TNFRSF10B-207ENST00000523504 SPECC1LQ69YQ0 1117 aa23.12■■□□□ 1.29
TNFRSF10B-207ENST00000523504 VPS52Q8N1B4 723 aa23.12■■□□□ 1.29
TNFRSF10B-207ENST00000523504 FBXO22Q8NEZ5 403 aa23.12■■□□□ 1.29
TNFRSF10B-207ENST00000523504 SPPL3Q8TCT6 385 aa23.12■■□□□ 1.29
TNFRSF10B-207ENST00000523504 GDPD5Q8WTR4 605 aa23.12■■□□□ 1.29
TNFRSF10B-207ENST00000523504 POF1BQ8WVV4 589 aa23.12■■□□□ 1.29
TNFRSF10B-207ENST00000523504 CYP11A1P05108 521 aa23.11■■□□□ 1.29
TNFRSF10B-207ENST00000523504 TBXAS1P24557 533 aaPredicted RBP23.11■■□□□ 1.29
TNFRSF10B-207ENST00000523504 ACAT1P24752 427 aaKnown RBP23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms