RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 SPIRE2Q8WWL2 714 aa28.21■■■□□ 2.11
PVT1-219ENST00000523427 NTPCRQ9BSD7 190 aaKnown RBP28.21■■■□□ 2.11
PVT1-219ENST00000523427 LRRC3Q9BY71 257 aa28.21■■■□□ 2.11
PVT1-219ENST00000523427 HAPLN2Q9GZV7 340 aa28.21■■■□□ 2.11
PVT1-219ENST00000523427 ATXN3LQ9H3M9 355 aa28.21■■■□□ 2.11
PVT1-219ENST00000523427 NPHP3-ACAD11A0A0J9YXS1 232 aa28.2■■■□□ 2.1
PVT1-219ENST00000523427 CHADO15335 359 aa28.2■■■□□ 2.1
PVT1-219ENST00000523427 CLTAP09496 248 aa28.2■■■□□ 2.1
PVT1-219ENST00000523427 GUCY2CP25092 1073 aa28.2■■■□□ 2.1
PVT1-219ENST00000523427 HOXC13P31276 330 aa28.2■■■□□ 2.1
PVT1-219ENST00000523427 MCL1Q07820 350 aa28.2■■■□□ 2.1
PVT1-219ENST00000523427 TXNDC11Q6PKC3 985 aa28.2■■■□□ 2.1
PVT1-219ENST00000523427 ZPBP2Q6X784 338 aa28.2■■■□□ 2.1
PVT1-219ENST00000523427 TTC9BQ8N6N2 239 aa28.2■■■□□ 2.1
PVT1-219ENST00000523427 BEST2Q8NFU1 509 aa28.2■■■□□ 2.1
PVT1-219ENST00000523427 FAM212AQ96EL1 285 aa28.2■■■□□ 2.1
PVT1-219ENST00000523427 SEMA4GQ9NTN9 838 aa28.2■■■□□ 2.1
PVT1-219ENST00000523427 GTSE1Q9NYZ3 720 aa28.2■■■□□ 2.1
PVT1-219ENST00000523427 UBQLN1Q9UMX0 589 aaKnown RBP28.2■■■□□ 2.1
PVT1-219ENST00000523427 COL4A2P08572 1712 aa28.2■■■□□ 2.1
PVT1-219ENST00000523427 LACTBL1A8MY62 500 aa28.19■■■□□ 2.1
PVT1-219ENST00000523427 PPP2R3AQ06190 1150 aa28.19■■■□□ 2.1
PVT1-219ENST00000523427 DNAJB7Q7Z6W7 309 aaPredicted RBP28.19■■■□□ 2.1
PVT1-219ENST00000523427 LRRC3BQ96PB8 259 aa28.19■■■□□ 2.1
PVT1-219ENST00000523427 TMEM209Q96SK2 561 aa28.19■■■□□ 2.1
PVT1-219ENST00000523427 TIPINQ9BVW5 301 aa28.19■■■□□ 2.1
PVT1-219ENST00000523427 C8orf33Q9H7E9 229 aaPredicted RBP28.19■■■□□ 2.1
PVT1-219ENST00000523427 PLEKHA5Q9HAU0 1116 aa28.19■■■□□ 2.1
PVT1-219ENST00000523427 C2orf42Q9NWW7 574 aa28.19■■■□□ 2.1
PVT1-219ENST00000523427 TTC26A0AVF1 554 aa28.18■■■□□ 2.1
PVT1-219ENST00000523427 OR6C75A6NL08 312 aa28.18■■■□□ 2.1
PVT1-219ENST00000523427 SPECC1L-ADORA2AF8WAN1 911 aa28.18■■■□□ 2.1
PVT1-219ENST00000523427 PPEF2O14830 753 aa28.18■■■□□ 2.1
PVT1-219ENST00000523427 U2AF2P26368 475 aaKnown RBP eCLIP28.18■■■□□ 2.12e-7■■□□□ 11.9
PVT1-219ENST00000523427 LRPAP1P30533 357 aa28.18■■■□□ 2.1
PVT1-219ENST00000523427 GPR17Q13304 367 aa28.18■■■□□ 2.1
PVT1-219ENST00000523427 PPM1JQ5JR12 505 aa28.18■■■□□ 2.1
PVT1-219ENST00000523427 GPR158Q5T848 1215 aa28.18■■■□□ 2.1
PVT1-219ENST00000523427 OVOS1Q6IE37 1185 aa28.18■■■□□ 2.1
PVT1-219ENST00000523427 CENPPQ6IPU0 288 aa28.18■■■□□ 2.1
PVT1-219ENST00000523427 CEP68Q76N32 757 aa28.18■■■□□ 2.1
PVT1-219ENST00000523427 NETO1Q8TDF5 533 aa28.18■■■□□ 2.1
PVT1-219ENST00000523427 PNMA5Q96PV4 448 aa28.18■■■□□ 2.1
PVT1-219ENST00000523427 GDF9O60383 454 aa28.17■■■□□ 2.1
PVT1-219ENST00000523427 NEFLP07196 543 aa28.17■■■□□ 2.1
PVT1-219ENST00000523427 GABRR2P28476 465 aa28.17■■■□□ 2.1
PVT1-219ENST00000523427 FCHO2Q0JRZ9 810 aa28.17■■■□□ 2.1
PVT1-219ENST00000523427 PON2Q15165 354 aa28.17■■■□□ 2.1
PVT1-219ENST00000523427 WDR44Q5JSH3 913 aa28.17■■■□□ 2.1
PVT1-219ENST00000523427 ARMCX5Q6P1M9 558 aa28.17■■■□□ 2.1
PVT1-219ENST00000523427 GAREM2Q75VX8 874 aa28.17■■■□□ 2.1
PVT1-219ENST00000523427 KCNG1Q9UIX4 513 aa28.17■■■□□ 2.1
PVT1-219ENST00000523427 MTMR11A4FU01 709 aa28.16■■■□□ 2.1
PVT1-219ENST00000523427 LAD1O00515 517 aa28.16■■■□□ 2.1
PVT1-219ENST00000523427 CTHP32929 405 aa28.16■■■□□ 2.1
PVT1-219ENST00000523427 LIG4P49917 911 aa28.16■■■□□ 2.1
PVT1-219ENST00000523427 ZBTB6Q15916 424 aa28.16■■■□□ 2.1
PVT1-219ENST00000523427 MCTP1Q6DN14 999 aa28.16■■■□□ 2.1
PVT1-219ENST00000523427 PRR23CQ6ZRP0 262 aa28.16■■■□□ 2.1
PVT1-219ENST00000523427 LONP2Q86WA8 852 aa28.16■■■□□ 2.1
PVT1-219ENST00000523427 SYT2Q8N9I0 419 aaPredicted RBP28.16■■■□□ 2.1
PVT1-219ENST00000523427 MSANTD3Q96H12 275 aa28.16■■■□□ 2.1
PVT1-219ENST00000523427 CDK5RAP3Q96JB5 506 aa28.16■■■□□ 2.1
PVT1-219ENST00000523427 OXCT2Q9BYC2 517 aaPredicted RBP28.16■■■□□ 2.1
PVT1-219ENST00000523427 SDK1Q7Z5N4 2213 aa28.16■■■□□ 2.1
PVT1-219ENST00000523427 K7ESF4 209 aa28.15■■■□□ 2.1
PVT1-219ENST00000523427 SLC30A4O14863 429 aa28.15■■■□□ 2.1
PVT1-219ENST00000523427 PLA2G4BP0C869 781 aa28.15■■■□□ 2.1
PVT1-219ENST00000523427 PRPHP41219 470 aa28.15■■■□□ 2.1
PVT1-219ENST00000523427 MLLT6P55198 1093 aaPredicted RBP28.15■■■□□ 2.1
PVT1-219ENST00000523427 TNK2Q07912 1038 aa28.15■■■□□ 2.1
PVT1-219ENST00000523427 C1orf228Q6PIY5 440 aa28.15■■■□□ 2.1
PVT1-219ENST00000523427 HAUS6Q7Z4H7 955 aa28.15■■■□□ 2.1
PVT1-219ENST00000523427 ZSCAN31Q96LW9 406 aaPredicted RBP28.15■■■□□ 2.1
PVT1-219ENST00000523427 SEPT5Q99719 369 aaPredicted RBP28.15■■■□□ 2.1
PVT1-219ENST00000523427 MKNK1Q9BUB5 465 aa28.15■■■□□ 2.1
PVT1-219ENST00000523427 RPF1Q9H9Y2 349 aaKnown RBP28.15■■■□□ 2.1
PVT1-219ENST00000523427 EIF4ENIF1Q9NRA8 985 aaKnown RBP28.15■■■□□ 2.1
PVT1-219ENST00000523427 MYBPHLA2RUH7 354 aa28.14■■■□□ 2.1
PVT1-219ENST00000523427 XPOTO43592 962 aaKnown RBP28.14■■■□□ 2.1
PVT1-219ENST00000523427 ADRB1P08588 477 aa28.14■■■□□ 2.1
PVT1-219ENST00000523427 CYP3A5P20815 502 aa28.14■■■□□ 2.1
PVT1-219ENST00000523427 AARSP49588 968 aaKnown RBP eCLIP28.14■■■□□ 2.1
PVT1-219ENST00000523427 CYP4F8P98187 520 aa28.14■■■□□ 2.1
PVT1-219ENST00000523427 DHX8Q14562 1220 aaKnown RBP28.14■■■□□ 2.1
PVT1-219ENST00000523427 ENOX2Q16206 610 aaKnown RBP28.14■■■□□ 2.1
PVT1-219ENST00000523427 CSRP2Q16527 193 aa28.14■■■□□ 2.1
PVT1-219ENST00000523427 ARHGAP29Q52LW3 1261 aa28.14■■■□□ 2.1
PVT1-219ENST00000523427 ARHGAP15Q53QZ3 475 aa28.14■■■□□ 2.1
PVT1-219ENST00000523427 DGKKQ5KSL6 1271 aa28.14■■■□□ 2.1
PVT1-219ENST00000523427 RALGPS2Q86X27 583 aaPredicted RBP28.14■■■□□ 2.1
PVT1-219ENST00000523427 LPIN3Q9BQK8 851 aa28.14■■■□□ 2.1
PVT1-219ENST00000523427 SMG9Q9H0W8 520 aaKnown RBP28.14■■■□□ 2.1
PVT1-219ENST00000523427 PDCD11Q14690 1871 aaKnown RBP28.14■■■□□ 2.1
PVT1-219ENST00000523427 VWA3AA6NCI4 1184 aa28.13■■■□□ 2.09
PVT1-219ENST00000523427 LRP3O75074 770 aa28.13■■■□□ 2.09
PVT1-219ENST00000523427 SLC12A3P55017 1021 aa28.13■■■□□ 2.09
PVT1-219ENST00000523427 MYBPC2Q14324 1141 aa28.13■■■□□ 2.09
PVT1-219ENST00000523427 FAM160A2Q8N612 972 aaPredicted RBP28.13■■■□□ 2.09
PVT1-219ENST00000523427 PSMG2Q969U7 264 aa28.13■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms