RNA–Protein interactions for RNA: ENST00000523339.1

NPM1-210, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 268 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-210ENST00000523339 WDR5BQ86VZ2 330 aa4.27□□□□□ -1.73
NPM1-210ENST00000523339 CEP57Q86XR8 500 aa4.27□□□□□ -1.73
NPM1-210ENST00000523339 MAP4K3Q8IVH8 894 aa4.27□□□□□ -1.73
NPM1-210ENST00000523339 FAM20CQ8IXL6 584 aa4.27□□□□□ -1.73
NPM1-210ENST00000523339 KIAA0319LQ8IZA0 1049 aa4.27□□□□□ -1.73
NPM1-210ENST00000523339 CHCHD4Q8N4Q1 142 aa4.27□□□□□ -1.73
NPM1-210ENST00000523339 ITFG1Q8TB96 612 aa4.27□□□□□ -1.73
NPM1-210ENST00000523339 SHKBP1Q8TBC3 707 aa4.27□□□□□ -1.73
NPM1-210ENST00000523339 PI4K2BQ8TCG2 481 aa4.27□□□□□ -1.73
NPM1-210ENST00000523339 BCL7CQ8WUZ0 217 aaPredicted RBP4.27□□□□□ -1.73
NPM1-210ENST00000523339 GAB3Q8WWW8 586 aa4.27□□□□□ -1.73
NPM1-210ENST00000523339 PIK3R5Q8WYR1 880 aa4.27□□□□□ -1.73
NPM1-210ENST00000523339 ZNF707Q96C28 371 aaPredicted RBP4.27□□□□□ -1.73
NPM1-210ENST00000523339 CCDC136Q96JN2 1154 aa4.27□□□□□ -1.73
NPM1-210ENST00000523339 HHIPQ96QV1 700 aa4.27□□□□□ -1.73
NPM1-210ENST00000523339 PIGSQ96S52 555 aa4.27□□□□□ -1.73
NPM1-210ENST00000523339 TMEM175Q9BSA9 504 aa4.27□□□□□ -1.73
NPM1-210ENST00000523339 HERC2P3Q9BVR0 1158 aa4.27□□□□□ -1.73
NPM1-210ENST00000523339 COLEC11Q9BWP8 271 aa4.27□□□□□ -1.73
NPM1-210ENST00000523339 RHOBTB2Q9BYZ6 727 aa4.27□□□□□ -1.73
NPM1-210ENST00000523339 GCOM2Q9BZD3 368 aaPredicted RBP4.27□□□□□ -1.73
NPM1-210ENST00000523339 CHMP4BQ9H444 224 aaKnown RBP4.27□□□□□ -1.73
NPM1-210ENST00000523339 SLITRK6Q9H5Y7 841 aa4.27□□□□□ -1.73
NPM1-210ENST00000523339 ZFP14Q9HCL3 533 aa4.27□□□□□ -1.73
NPM1-210ENST00000523339 SRA1Q9HD15 236 aaKnown RBP4.27□□□□□ -1.73
NPM1-210ENST00000523339 ZNF302Q9NR11 478 aa4.27□□□□□ -1.73
NPM1-210ENST00000523339 ADGRE2Q9UHX3 823 aa4.27□□□□□ -1.73
NPM1-210ENST00000523339 ANAPC4Q9UJX5 808 aa4.27□□□□□ -1.73
NPM1-210ENST00000523339 NOVA2Q9UNW9 492 aaKnown RBP4.27□□□□□ -1.73
NPM1-210ENST00000523339 SAMM50Q9Y512 469 aa4.27□□□□□ -1.73
NPM1-210ENST00000523339 RAI2Q9Y5P3 530 aa4.27□□□□□ -1.73
NPM1-210ENST00000523339 TTC3P53804 2025 aa4.27□□□□□ -1.73
NPM1-210ENST00000523339 GREB1LQ9C091 1923 aaPredicted RBP4.27□□□□□ -1.73
NPM1-210ENST00000523339 MYO10Q9HD67 2058 aa4.26□□□□□ -1.73
NPM1-210ENST00000523339 SMG1Q96Q15 3661 aaKnown RBP4.26□□□□□ -1.73
NPM1-210ENST00000523339 ERICH2A1L162 156 aa4.26□□□□□ -1.73
NPM1-210ENST00000523339 CAPN8A6NHC0 703 aa4.26□□□□□ -1.73
NPM1-210ENST00000523339 NRP1O14786 923 aa4.26□□□□□ -1.73
NPM1-210ENST00000523339 MAGEB2O15479 319 aa4.26□□□□□ -1.73
NPM1-210ENST00000523339 MAFGO15525 162 aa4.26□□□□□ -1.73
NPM1-210ENST00000523339 ATG13O75143 517 aa4.26□□□□□ -1.73
NPM1-210ENST00000523339 TADA2AO75478 443 aa4.26□□□□□ -1.73
NPM1-210ENST00000523339 LRG1P02750 347 aa4.26□□□□□ -1.73
NPM1-210ENST00000523339 HNRNPA1P09651 372 aaKnown RBP eCLIP4.26□□□□□ -1.73
NPM1-210ENST00000523339 TDGF1P13385 188 aa4.26□□□□□ -1.73
NPM1-210ENST00000523339 KCNA2P16389 499 aa4.26□□□□□ -1.73
NPM1-210ENST00000523339 RPL17P18621 184 aaKnown RBP4.26□□□□□ -1.73
NPM1-210ENST00000523339 ABCG1P45844 678 aa4.26□□□□□ -1.73
NPM1-210ENST00000523339 PREPP48147 710 aa4.26□□□□□ -1.73
NPM1-210ENST00000523339 DNM2P50570 870 aa4.26□□□□□ -1.73
NPM1-210ENST00000523339 HYAL2Q12891 473 aa4.26□□□□□ -1.73
NPM1-210ENST00000523339 LMAN2Q12907 356 aa4.26□□□□□ -1.73
NPM1-210ENST00000523339 AAMPQ13685 434 aa4.26□□□□□ -1.73
NPM1-210ENST00000523339 DSC3Q14574 896 aa4.26□□□□□ -1.73
NPM1-210ENST00000523339 SART3Q15020 963 aaKnown RBP4.26□□□□□ -1.73
NPM1-210ENST00000523339 KARSQ15046 597 aaKnown RBP4.26□□□□□ -1.73
NPM1-210ENST00000523339 DUOXA2Q1HG44 320 aa4.26□□□□□ -1.73
NPM1-210ENST00000523339 USP41Q3LFD5 358 aa4.26□□□□□ -1.73
NPM1-210ENST00000523339 C8orf34Q49A92 452 aa4.26□□□□□ -1.73
NPM1-210ENST00000523339 DGKKQ5KSL6 1271 aa4.26□□□□□ -1.73
NPM1-210ENST00000523339 AXDND1Q5T1B0 1012 aaPredicted RBP4.26□□□□□ -1.73
NPM1-210ENST00000523339 SWSAP1Q6NVH7 229 aa4.26□□□□□ -1.73
NPM1-210ENST00000523339 EFCAB12Q6NXP0 572 aa4.26□□□□□ -1.73
NPM1-210ENST00000523339 C16orf46Q6P387 395 aa4.26□□□□□ -1.73
NPM1-210ENST00000523339 USP17L6PQ6QN14 398 aa4.26□□□□□ -1.73
NPM1-210ENST00000523339 CATSPER4Q7RTX7 472 aa4.26□□□□□ -1.73
NPM1-210ENST00000523339 HAUS6Q7Z4H7 955 aa4.26□□□□□ -1.73
NPM1-210ENST00000523339 CHD1LQ86WJ1 897 aa4.26□□□□□ -1.73
NPM1-210ENST00000523339 TTC30AQ86WT1 665 aa4.26□□□□□ -1.73
NPM1-210ENST00000523339 ZNF280BQ86YH2 543 aa4.26□□□□□ -1.73
NPM1-210ENST00000523339 SLC7A14Q8TBB6 771 aa4.26□□□□□ -1.73
NPM1-210ENST00000523339 STK32AQ8WU08 396 aa4.26□□□□□ -1.73
NPM1-210ENST00000523339 UTP4Q969X6 686 aaKnown RBP4.26□□□□□ -1.73
NPM1-210ENST00000523339 B3GALT6Q96L58 329 aa4.26□□□□□ -1.73
NPM1-210ENST00000523339 MYRFLQ96LU7 910 aa4.26□□□□□ -1.73
NPM1-210ENST00000523339 BBC3Q96PG8 261 aaPredicted RBP4.26□□□□□ -1.73
NPM1-210ENST00000523339 FAM83CQ9BQN1 747 aa4.26□□□□□ -1.73
NPM1-210ENST00000523339 GTPBP2Q9BX10 602 aaKnown RBP4.26□□□□□ -1.73
NPM1-210ENST00000523339 NUSAP1Q9BXS6 441 aaKnown RBP4.26□□□□□ -1.73
NPM1-210ENST00000523339 INO80BQ9C086 356 aaPredicted RBP4.26□□□□□ -1.73
NPM1-210ENST00000523339 ADAM19Q9H013 955 aa4.26□□□□□ -1.73
NPM1-210ENST00000523339 ZMYND15Q9H091 742 aa4.26□□□□□ -1.73
NPM1-210ENST00000523339 CLMPQ9H6B4 373 aa4.26□□□□□ -1.73
NPM1-210ENST00000523339 RSAD1Q9HA92 442 aa4.26□□□□□ -1.73
NPM1-210ENST00000523339 CHST12Q9NRB3 414 aa4.26□□□□□ -1.73
NPM1-210ENST00000523339 RBM12Q9NTZ6 932 aaKnown RBP4.26□□□□□ -1.73
NPM1-210ENST00000523339 RNF19AQ9NV58 838 aa4.26□□□□□ -1.73
NPM1-210ENST00000523339 GDE1Q9NZC3 331 aa4.26□□□□□ -1.73
NPM1-210ENST00000523339 TMEM63CQ9P1W3 806 aa4.26□□□□□ -1.73
NPM1-210ENST00000523339 SALL4Q9UJQ4 1053 aa4.26□□□□□ -1.73
NPM1-210ENST00000523339 RNF114Q9Y508 228 aa4.26□□□□□ -1.73
NPM1-210ENST00000523339 LCTP09848 1927 aa4.26□□□□□ -1.73
NPM1-210ENST00000523339 CNOT1A5YKK6 2376 aaKnown RBP4.26□□□□□ -1.73
NPM1-210ENST00000523339 COL1A2P08123 1366 aa4.26□□□□□ -1.73
NPM1-210ENST00000523339 IGSF10Q6WRI0 2623 aa4.25□□□□□ -1.73
NPM1-210ENST00000523339 KIAA1671Q9BY89 1806 aa4.25□□□□□ -1.73
NPM1-210ENST00000523339 PNMA6FA0A0J9YX94 578 aa4.25□□□□□ -1.73
NPM1-210ENST00000523339 LNP1A1A4G5 178 aa4.25□□□□□ -1.73
NPM1-210ENST00000523339 SLC38A8A6NNN8 435 aa4.25□□□□□ -1.73
NPM1-210ENST00000523339 WDR64B1ANS9 1081 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms