RNA–Protein interactions for RNA: ENST00000522658.5

PABPC1-220, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 736 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-220ENST00000522658 CNTNAP2Q9UHC6 1331 aa6.96□□□□□ -1.3
PABPC1-220ENST00000522658 PLXNA3P51805 1871 aa6.96□□□□□ -1.3
PABPC1-220ENST00000522658 A0A087WZ62 844 aa6.95□□□□□ -1.3
PABPC1-220ENST00000522658 CSDE1O75534 798 aaKnown RBP6.95□□□□□ -1.3
PABPC1-220ENST00000522658 ALDH2P05091 517 aa6.95□□□□□ -1.3
PABPC1-220ENST00000522658 GALTP07902 379 aa6.95□□□□□ -1.3
PABPC1-220ENST00000522658 SRFP11831 508 aa6.95□□□□□ -1.3
PABPC1-220ENST00000522658 SDHBP21912 280 aa6.95□□□□□ -1.3
PABPC1-220ENST00000522658 SLC11A1P49279 550 aa6.95□□□□□ -1.3
PABPC1-220ENST00000522658 GLUD2P49448 558 aa6.95□□□□□ -1.3
PABPC1-220ENST00000522658 CLCN4P51793 760 aa6.95□□□□□ -1.3
PABPC1-220ENST00000522658 RCAN1P53805 252 aa6.95□□□□□ -1.3
PABPC1-220ENST00000522658 NLRP5P59047 1200 aa6.95□□□□□ -1.3
PABPC1-220ENST00000522658 PUM1Q14671 1186 aaKnown RBP eCLIP6.95□□□□□ -1.3
PABPC1-220ENST00000522658 XKR3Q5GH77 459 aa6.95□□□□□ -1.3
PABPC1-220ENST00000522658 LIN9Q5TKA1 542 aa6.95□□□□□ -1.3
PABPC1-220ENST00000522658 PHLDB3Q6NSJ2 640 aa6.95□□□□□ -1.3
PABPC1-220ENST00000522658 CYP26C1Q6V0L0 522 aa6.95□□□□□ -1.3
PABPC1-220ENST00000522658 ZAR1Q86SH2 424 aa6.95□□□□□ -1.3
PABPC1-220ENST00000522658 CNNM3Q8NE01 707 aa6.95□□□□□ -1.3
PABPC1-220ENST00000522658 PSPC1Q8WXF1 523 aaKnown RBP6.95□□□□□ -1.3
PABPC1-220ENST00000522658 RUBCNQ92622 972 aa6.95□□□□□ -1.3
PABPC1-220ENST00000522658 TCEANC2Q96MN5 208 aa6.95□□□□□ -1.3
PABPC1-220ENST00000522658 RPS6KC1Q96S38 1066 aa6.95□□□□□ -1.3
PABPC1-220ENST00000522658 RIT2Q99578 217 aa6.95□□□□□ -1.3
PABPC1-220ENST00000522658 FDXACB1Q9BRP7 624 aaPredicted RBP6.95□□□□□ -1.3
PABPC1-220ENST00000522658 TMEM175Q9BSA9 504 aa6.95□□□□□ -1.3
PABPC1-220ENST00000522658 HERC2P3Q9BVR0 1158 aa6.95□□□□□ -1.3
PABPC1-220ENST00000522658 NRDE2Q9H7Z3 1164 aa6.95□□□□□ -1.3
PABPC1-220ENST00000522658 ARHGEF3Q9NR81 526 aa6.95□□□□□ -1.3
PABPC1-220ENST00000522658 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.95□□□□□ -1.3
PABPC1-220ENST00000522658 WNT16Q9UBV4 365 aa6.95□□□□□ -1.3
PABPC1-220ENST00000522658 SIT1Q9Y3P8 196 aa6.95□□□□□ -1.3
PABPC1-220ENST00000522658 R4GN57 208 aa6.95□□□□□ -1.3
PABPC1-220ENST00000522658 MYH9P35579 1960 aaKnown RBP6.95□□□□□ -1.3
PABPC1-220ENST00000522658 EVPLQ92817 2033 aa6.94□□□□□ -1.3
PABPC1-220ENST00000522658 IGLV3-22A0A075B6J6 115 aa6.94□□□□□ -1.3
PABPC1-220ENST00000522658 CCDC195A0A1B0GUA6 201 aa6.94□□□□□ -1.3
PABPC1-220ENST00000522658 CPLX1O14810 134 aa6.94□□□□□ -1.3
PABPC1-220ENST00000522658 LAMTOR5O43504 91 aa6.94□□□□□ -1.3
PABPC1-220ENST00000522658 FAM13AO94988 1023 aa6.94□□□□□ -1.3
PABPC1-220ENST00000522658 POMCP01189 267 aa6.94□□□□□ -1.3
PABPC1-220ENST00000522658 SOD2P04179 222 aa6.94□□□□□ -1.3
PABPC1-220ENST00000522658 CTSBP07858 339 aa6.94□□□□□ -1.3
PABPC1-220ENST00000522658 CNPP09543 421 aaKnown RBP6.94□□□□□ -1.3
PABPC1-220ENST00000522658 ITGA4P13612 1032 aa6.94□□□□□ -1.3
PABPC1-220ENST00000522658 USP11P51784 963 aa6.94□□□□□ -1.3
PABPC1-220ENST00000522658 GSTM4Q03013 218 aa6.94□□□□□ -1.3
PABPC1-220ENST00000522658 ZNF423Q2M1K9 1284 aa6.94□□□□□ -1.3
PABPC1-220ENST00000522658 PPP4R3AQ6IN85 833 aa6.94□□□□□ -1.3
PABPC1-220ENST00000522658 CPLX2Q6PUV4 134 aaKnown RBP6.94□□□□□ -1.3
PABPC1-220ENST00000522658 MTSS1LQ765P7 747 aa6.94□□□□□ -1.3
PABPC1-220ENST00000522658 TMEM173Q86WV6 379 aaPredicted RBP6.94□□□□□ -1.3
PABPC1-220ENST00000522658 CMASQ8NFW8 434 aaPredicted RBP6.94□□□□□ -1.3
PABPC1-220ENST00000522658 TCP11Q8WWU5 503 aa6.94□□□□□ -1.3
PABPC1-220ENST00000522658 KLHL5Q96PQ7 755 aa6.94□□□□□ -1.3
PABPC1-220ENST00000522658 APOL6Q9BWW8 343 aa6.94□□□□□ -1.3
PABPC1-220ENST00000522658 SLC26A6Q9BXS9 759 aa6.94□□□□□ -1.3
PABPC1-220ENST00000522658 BCO2Q9BYV7 579 aa6.94□□□□□ -1.3
PABPC1-220ENST00000522658 LSG1Q9H089 658 aaKnown RBP6.94□□□□□ -1.3
PABPC1-220ENST00000522658 ZMYND12Q9H0C1 365 aa6.94□□□□□ -1.3
PABPC1-220ENST00000522658 UNC45AQ9H3U1 944 aa6.94□□□□□ -1.3
PABPC1-220ENST00000522658 PLEKHA4Q9H4M7 779 aa6.94□□□□□ -1.3
PABPC1-220ENST00000522658 WDR6Q9NNW5 1121 aaKnown RBP6.94□□□□□ -1.3
PABPC1-220ENST00000522658 AGPAT5Q9NUQ2 364 aa6.94□□□□□ -1.3
PABPC1-220ENST00000522658 DNAJB4Q9UDY4 337 aa6.94□□□□□ -1.3
PABPC1-220ENST00000522658 RAB23Q9ULC3 237 aa6.94□□□□□ -1.3
PABPC1-220ENST00000522658 PCDHB2Q9Y5E7 798 aa6.94□□□□□ -1.3
PABPC1-220ENST00000522658 COL4A3BPQ9Y5P4 624 aa6.94□□□□□ -1.3
PABPC1-220ENST00000522658 TRIOO75962 3097 aa6.94□□□□□ -1.3
PABPC1-220ENST00000522658 CFAP54Q96N23 3096 aa6.94□□□□□ -1.3
PABPC1-220ENST00000522658 NRP1O14786 923 aa6.93□□□□□ -1.3
PABPC1-220ENST00000522658 NCAM2O15394 837 aa6.93□□□□□ -1.3
PABPC1-220ENST00000522658 PI15O43692 258 aa6.93□□□□□ -1.3
PABPC1-220ENST00000522658 NARSO43776 548 aaKnown RBP6.93□□□□□ -1.3
PABPC1-220ENST00000522658 ZNF862O60290 1169 aa6.93□□□□□ -1.3
PABPC1-220ENST00000522658 EIF4EBP3O60516 100 aaPredicted RBP6.93□□□□□ -1.3
PABPC1-220ENST00000522658 OFD1O75665 1012 aa6.93□□□□□ -1.3
PABPC1-220ENST00000522658 DCNP07585 359 aaKnown RBP6.93□□□□□ -1.3
PABPC1-220ENST00000522658 MYBP10242 640 aa6.93□□□□□ -1.3
PABPC1-220ENST00000522658 ADH5P11766 374 aa6.93□□□□□ -1.3
PABPC1-220ENST00000522658 XBP1P17861 261 aa6.93□□□□□ -1.3
PABPC1-220ENST00000522658 CIITAP33076 1130 aa6.93□□□□□ -1.3
PABPC1-220ENST00000522658 PSMC5P62195 406 aa6.93□□□□□ -1.3
PABPC1-220ENST00000522658 PFKPQ01813 784 aa6.93□□□□□ -1.3
PABPC1-220ENST00000522658 TFDP1Q14186 410 aa6.93□□□□□ -1.3
PABPC1-220ENST00000522658 PPP2R5DQ14738 602 aa6.93□□□□□ -1.3
PABPC1-220ENST00000522658 UBXN2BQ14CS0 331 aa6.93□□□□□ -1.3
PABPC1-220ENST00000522658 UGCGQ16739 394 aa6.93□□□□□ -1.3
PABPC1-220ENST00000522658 NOTUMQ6P988 496 aa6.93□□□□□ -1.3
PABPC1-220ENST00000522658 DCLRE1AQ6PJP8 1040 aa6.93□□□□□ -1.3
PABPC1-220ENST00000522658 BLOC1S2Q6QNY1 142 aa6.93□□□□□ -1.3
PABPC1-220ENST00000522658 OTUD6AQ7L8S5 288 aa6.93□□□□□ -1.3
PABPC1-220ENST00000522658 SRGAP1Q7Z6B7 1085 aa6.93□□□□□ -1.3
PABPC1-220ENST00000522658 CCNJLQ8IV13 435 aa6.93□□□□□ -1.3
PABPC1-220ENST00000522658 GLYCTKQ8IVS8 523 aa6.93□□□□□ -1.3
PABPC1-220ENST00000522658 C1orf210Q8IVY1 113 aa6.93□□□□□ -1.3
PABPC1-220ENST00000522658 LINC01465Q8N7H1 131 aa6.93□□□□□ -1.3
PABPC1-220ENST00000522658 TBCKQ8TEA7 893 aa6.93□□□□□ -1.3
PABPC1-220ENST00000522658 SLC22A17Q8WUG5 538 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms