RNA–Protein interactions for RNA: ENST00000522653.5

TCF7-223, Transcript of transcription factor 7, human

TSL 2

Gene TCF7, Length 5,340 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF7-223	ENST00000522653	NRXN1	Q9ULB1	1477 aa		10.85	□□□□□ -0.67
TCF7-223	ENST00000522653	ZNF263	O14978	683 aa		10.84	□□□□□ -0.67
TCF7-223	ENST00000522653	MAPK13	O15264	365 aa		10.84	□□□□□ -0.67
TCF7-223	ENST00000522653	PDHA1	P08559	390 aa		10.84	□□□□□ -0.67
TCF7-223	ENST00000522653	IRF1	P10914	325 aa		10.84	□□□□□ -0.67
TCF7-223	ENST00000522653	IRAK1	P51617	712 aa		10.84	□□□□□ -0.67
TCF7-223	ENST00000522653	PPP4C	P60510	307 aa		10.84	□□□□□ -0.67
TCF7-223	ENST00000522653	UGP2	Q16851	508 aa		10.84	□□□□□ -0.67
TCF7-223	ENST00000522653	PDZD8	Q8NEN9	1154 aa		10.84	□□□□□ -0.67
TCF7-223	ENST00000522653	NSUN4	Q96CB9	384 aa	Known RBP	10.84	□□□□□ -0.67
TCF7-223	ENST00000522653	ATG4C	Q96DT6	458 aa		10.84	□□□□□ -0.67
TCF7-223	ENST00000522653	KIAA1683	Q9H0B3	1180 aa		10.84	□□□□□ -0.67
TCF7-223	ENST00000522653	SMARCAL1	Q9NZC9	954 aa		10.84	□□□□□ -0.67
TCF7-223	ENST00000522653	LRRC7	Q96NW7	1537 aa		10.84	□□□□□ -0.67
TCF7-223	ENST00000522653	NCK2	O43639	380 aa		10.84	□□□□□ -0.67
TCF7-223	ENST00000522653	ZC3H11A	O75152	810 aa	Known RBP eCLIP	10.84	□□□□□ -0.67
TCF7-223	ENST00000522653	DCTN3	O75935	186 aa		10.84	□□□□□ -0.67
TCF7-223	ENST00000522653	JAK1	P23458	1154 aa		10.84	□□□□□ -0.67
TCF7-223	ENST00000522653	NPEPPS	P55786	919 aa		10.84	□□□□□ -0.67
TCF7-223	ENST00000522653	MFSD10	Q14728	455 aa		10.84	□□□□□ -0.67
TCF7-223	ENST00000522653	BEND6	Q5SZJ8	279 aa	Predicted RBP	10.84	□□□□□ -0.67
TCF7-223	ENST00000522653	CENPU	Q71F23	418 aa		10.84	□□□□□ -0.67
TCF7-223	ENST00000522653	ADCK2	Q7Z695	626 aa		10.84	□□□□□ -0.67
TCF7-223	ENST00000522653	FMR1NB	Q8N0W7	255 aa	Predicted RBP	10.84	□□□□□ -0.67
TCF7-223	ENST00000522653	CDC26	Q8NHZ8	85 aa		10.84	□□□□□ -0.67
TCF7-223	ENST00000522653	SPIRE2	Q8WWL2	714 aa		10.84	□□□□□ -0.67
TCF7-223	ENST00000522653	ASPSCR1	Q9BZE9	553 aa		10.84	□□□□□ -0.67
TCF7-223	ENST00000522653	TMEM39B	Q9GZU3	492 aa		10.84	□□□□□ -0.67
TCF7-223	ENST00000522653	TLR8	Q9NR97	1041 aa	Known RBP	10.84	□□□□□ -0.67
TCF7-223	ENST00000522653	RRN3	Q9NYV6	651 aa		10.84	□□□□□ -0.67
TCF7-223	ENST00000522653	GPRC5D	Q9NZD1	345 aa		10.84	□□□□□ -0.67
TCF7-223	ENST00000522653	ZSWIM5	Q9P217	1185 aa		10.84	□□□□□ -0.67
TCF7-223	ENST00000522653	CLIC2	O15247	247 aa		10.84	□□□□□ -0.67
TCF7-223	ENST00000522653	SLC16A3	O15427	465 aa	Known RBP	10.84	□□□□□ -0.67
TCF7-223	ENST00000522653	CYP2A6	P11509	494 aa	Predicted RBP	10.84	□□□□□ -0.67
TCF7-223	ENST00000522653	CXCR5	P32302	372 aa		10.84	□□□□□ -0.67
TCF7-223	ENST00000522653	NECTIN1	Q15223	517 aa		10.84	□□□□□ -0.67
TCF7-223	ENST00000522653	FAM47E	Q6ZV65	393 aa		10.84	□□□□□ -0.67
TCF7-223	ENST00000522653	EFL1	Q7Z2Z2	1120 aa	Known RBP	10.84	□□□□□ -0.67
TCF7-223	ENST00000522653	FBXO32	Q969P5	355 aa		10.84	□□□□□ -0.67
TCF7-223	ENST00000522653	FMO2	Q99518	471 aa		10.84	□□□□□ -0.67
TCF7-223	ENST00000522653	EIF2AK1	Q9BQI3	630 aa	Known RBP	10.84	□□□□□ -0.67
TCF7-223	ENST00000522653	CINP	Q9BW66	212 aa	Predicted RBP	10.84	□□□□□ -0.67
TCF7-223	ENST00000522653	TNS2	Q63HR2	1409 aa		10.84	□□□□□ -0.67
TCF7-223	ENST00000522653		A0A088AWK7	358 aa		10.84	□□□□□ -0.67
TCF7-223	ENST00000522653	KRT87P	A6NCN2	255 aa		10.84	□□□□□ -0.67
TCF7-223	ENST00000522653	ZNF10	P21506	573 aa	Predicted RBP	10.84	□□□□□ -0.67
TCF7-223	ENST00000522653	DSG3	P32926	999 aa		10.84	□□□□□ -0.67
TCF7-223	ENST00000522653	HAL	P42357	657 aa		10.84	□□□□□ -0.67
TCF7-223	ENST00000522653	PSEN2	P49810	448 aa		10.84	□□□□□ -0.67
TCF7-223	ENST00000522653	BASP1	P80723	227 aa	Known RBP	10.84	□□□□□ -0.67
TCF7-223	ENST00000522653	P3H1	Q32P28	736 aa		10.84	□□□□□ -0.67
TCF7-223	ENST00000522653	PAN2	Q504Q3	1202 aa	Known RBP	10.84	□□□□□ -0.67
TCF7-223	ENST00000522653	PKN3	Q6P5Z2	889 aa		10.84	□□□□□ -0.67
TCF7-223	ENST00000522653	TLK2	Q86UE8	772 aa		10.84	□□□□□ -0.67
TCF7-223	ENST00000522653	IFNL1	Q8IU54	200 aa		10.84	□□□□□ -0.67
TCF7-223	ENST00000522653	ZSCAN18	Q8TBC5	510 aa	Predicted RBP	10.84	□□□□□ -0.67
TCF7-223	ENST00000522653	C3orf70	A6NLC5	250 aa	Predicted RBP	10.83	□□□□□ -0.68
TCF7-223	ENST00000522653	SLC2A4	P14672	509 aa		10.83	□□□□□ -0.68
TCF7-223	ENST00000522653	ESRRG	P62508	458 aa		10.83	□□□□□ -0.68
TCF7-223	ENST00000522653	HPCA	P84074	193 aa		10.83	□□□□□ -0.68
TCF7-223	ENST00000522653	ZNF697	Q5TEC3	545 aa		10.83	□□□□□ -0.68
TCF7-223	ENST00000522653	ATG16L1	Q676U5	607 aa		10.83	□□□□□ -0.68
TCF7-223	ENST00000522653	RETSAT	Q6NUM9	610 aa		10.83	□□□□□ -0.68
TCF7-223	ENST00000522653	STX19	Q8N4C7	294 aa		10.83	□□□□□ -0.68
TCF7-223	ENST00000522653	B3GALNT2	Q8NCR0	500 aa		10.83	□□□□□ -0.68
TCF7-223	ENST00000522653	BSND	Q8WZ55	320 aa		10.83	□□□□□ -0.68
TCF7-223	ENST00000522653	FUT8	Q9BYC5	575 aa		10.83	□□□□□ -0.68
TCF7-223	ENST00000522653	FANCF	Q9NPI8	374 aa		10.83	□□□□□ -0.68
TCF7-223	ENST00000522653	ABHD10	Q9NUJ1	306 aa		10.83	□□□□□ -0.68
TCF7-223	ENST00000522653	KLHL11	Q9NVR0	708 aa		10.83	□□□□□ -0.68
TCF7-223	ENST00000522653	LNPEP	Q9UIQ6	1025 aa		10.83	□□□□□ -0.68
TCF7-223	ENST00000522653	ZNF510	Q9Y2H8	683 aa		10.83	□□□□□ -0.68
TCF7-223	ENST00000522653	CCDC188	H7C350	402 aa		10.83	□□□□□ -0.68
TCF7-223	ENST00000522653	KRT37	O76014	449 aa		10.83	□□□□□ -0.68
TCF7-223	ENST00000522653	ANP32D	O95626	131 aa		10.83	□□□□□ -0.68
TCF7-223	ENST00000522653	GNA15	P30679	374 aa		10.83	□□□□□ -0.68
TCF7-223	ENST00000522653	TCF7	P36402	384 aa	Predicted RBP	10.83	□□□□□ -0.68
TCF7-223	ENST00000522653	MDH1	P40925	334 aa	Known RBP	10.83	□□□□□ -0.68
TCF7-223	ENST00000522653	FBXO33	Q7Z6M2	555 aa		10.83	□□□□□ -0.68
TCF7-223	ENST00000522653	GSPT2	Q8IYD1	628 aa	Known RBP	10.83	□□□□□ -0.68
TCF7-223	ENST00000522653	SLC26A7	Q8TE54	656 aa		10.83	□□□□□ -0.68
TCF7-223	ENST00000522653	ARHGEF26	Q96DR7	871 aa		10.83	□□□□□ -0.68
TCF7-223	ENST00000522653	GOLPH3L	Q9H4A5	285 aa		10.83	□□□□□ -0.68
TCF7-223	ENST00000522653	COPS7B	Q9H9Q2	264 aa	Predicted RBP	10.83	□□□□□ -0.68
TCF7-223	ENST00000522653	PCDHA13	Q9Y5I0	950 aa		10.83	□□□□□ -0.68
TCF7-223	ENST00000522653	CFAP69	A5D8W1	941 aa		10.83	□□□□□ -0.68
TCF7-223	ENST00000522653	KRT38	O76015	456 aa		10.83	□□□□□ -0.68
TCF7-223	ENST00000522653	NR3C1	P04150	777 aa		10.83	□□□□□ -0.68
TCF7-223	ENST00000522653	ALPPL2	P10696	532 aa		10.83	□□□□□ -0.68
TCF7-223	ENST00000522653	PRKCE	Q02156	737 aa		10.83	□□□□□ -0.68
TCF7-223	ENST00000522653	FAM46C	Q5VWP2	391 aa		10.83	□□□□□ -0.68
TCF7-223	ENST00000522653	NUGGC	Q68CJ6	796 aa		10.83	□□□□□ -0.68
TCF7-223	ENST00000522653	SZRD1	Q7Z422	152 aa		10.83	□□□□□ -0.68
TCF7-223	ENST00000522653	SLC44A5	Q8NCS7	719 aa		10.83	□□□□□ -0.68
TCF7-223	ENST00000522653	SUSD6	Q92537	303 aa		10.83	□□□□□ -0.68
TCF7-223	ENST00000522653	ZFP42	Q96MM3	310 aa		10.83	□□□□□ -0.68
TCF7-223	ENST00000522653	CCT8L2	Q96SF2	557 aa		10.83	□□□□□ -0.68
TCF7-223	ENST00000522653	ZMYND12	Q9H0C1	365 aa		10.83	□□□□□ -0.68
TCF7-223	ENST00000522653	PUS7L	Q9H0K6	701 aa	Known RBP	10.83	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms