RNA–Protein interactions for RNA: ENST00000520948.5

VEGFA-222, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,199 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-222ENST00000520948 STX17P56962 302 aa19.59■□□□□ 0.73
VEGFA-222ENST00000520948 C1orf220Q5T0J3 134 aa19.59■□□□□ 0.73
VEGFA-222ENST00000520948 FILIP1Q7Z7B0 1213 aa19.59■□□□□ 0.73
VEGFA-222ENST00000520948 WDR49Q8IV35 697 aa19.59■□□□□ 0.73
VEGFA-222ENST00000520948 CACTINQ8WUQ7 758 aaKnown RBP19.59■□□□□ 0.73
VEGFA-222ENST00000520948 SYAP1Q96A49 352 aaPredicted RBP19.59■□□□□ 0.73
VEGFA-222ENST00000520948 KLHL5Q96PQ7 755 aa19.59■□□□□ 0.73
VEGFA-222ENST00000520948 CGRRF1Q99675 332 aa19.59■□□□□ 0.73
VEGFA-222ENST00000520948 DPP3Q9NY33 737 aa19.59■□□□□ 0.73
VEGFA-222ENST00000520948 PODXLO00592 558 aa19.58■□□□□ 0.72
VEGFA-222ENST00000520948 C2CD2LO14523 706 aa19.58■□□□□ 0.72
VEGFA-222ENST00000520948 CNPP09543 421 aaKnown RBP19.58■□□□□ 0.72
VEGFA-222ENST00000520948 ERCC5P28715 1186 aaPredicted RBP19.58■□□□□ 0.72
VEGFA-222ENST00000520948 SCARA3Q6AZY7 606 aa19.58■□□□□ 0.72
VEGFA-222ENST00000520948 TAS1R1Q7RTX1 841 aa19.58■□□□□ 0.72
VEGFA-222ENST00000520948 PPFIBP1Q86W92 1011 aa19.58■□□□□ 0.72
VEGFA-222ENST00000520948 OR5B17Q8NGF7 314 aa19.58■□□□□ 0.72
VEGFA-222ENST00000520948 EEF2KMTQ96G04 330 aa19.58■□□□□ 0.72
VEGFA-222ENST00000520948 FAM84AQ96KN4 292 aa19.58■□□□□ 0.72
VEGFA-222ENST00000520948 CEP63Q96MT8 703 aa19.58■□□□□ 0.72
VEGFA-222ENST00000520948 EMILIN2Q9BXX0 1053 aa19.58■□□□□ 0.72
VEGFA-222ENST00000520948 GPR62Q9BZJ7 368 aa19.58■□□□□ 0.72
VEGFA-222ENST00000520948 IRF2BPLQ9H1B7 796 aa19.58■□□□□ 0.72
VEGFA-222ENST00000520948 MFSD1Q9H3U5 465 aa19.58■□□□□ 0.72
VEGFA-222ENST00000520948 USTQ9Y2C2 406 aa19.58■□□□□ 0.72
VEGFA-222ENST00000520948 LRRIQ3A6PVS8 624 aaPredicted RBP19.57■□□□□ 0.72
VEGFA-222ENST00000520948 PPEF2O14830 753 aa19.57■□□□□ 0.72
VEGFA-222ENST00000520948 SLC16A3O15427 465 aaKnown RBP19.57■□□□□ 0.72
VEGFA-222ENST00000520948 TADA2AO75478 443 aa19.57■□□□□ 0.72
VEGFA-222ENST00000520948 B3GAT3O94766 335 aa19.57■□□□□ 0.72
VEGFA-222ENST00000520948 CLCN4P51793 760 aa19.57■□□□□ 0.72
VEGFA-222ENST00000520948 DLG4P78352 724 aa19.57■□□□□ 0.72
VEGFA-222ENST00000520948 TFAMQ00059 246 aaKnown RBP19.57■□□□□ 0.72
VEGFA-222ENST00000520948 DUOXA2Q1HG44 320 aa19.57■□□□□ 0.72
VEGFA-222ENST00000520948 C9orf57Q5W0N0 161 aa19.57■□□□□ 0.72
VEGFA-222ENST00000520948 LMBRD2Q68DH5 695 aaPredicted RBP19.57■□□□□ 0.72
VEGFA-222ENST00000520948 FUT10Q6P4F1 479 aa19.57■□□□□ 0.72
VEGFA-222ENST00000520948 SASS6Q6UVJ0 657 aa19.57■□□□□ 0.72
VEGFA-222ENST00000520948 CCDC149Q6ZUS6 474 aa19.57■□□□□ 0.72
VEGFA-222ENST00000520948 INTS8Q75QN2 995 aaKnown RBP19.57■□□□□ 0.72
VEGFA-222ENST00000520948 GPR149Q86SP6 731 aa19.57■□□□□ 0.72
VEGFA-222ENST00000520948 FAM186BQ8IYM0 893 aa19.57■□□□□ 0.72
VEGFA-222ENST00000520948 PLCD3Q8N3E9 789 aa19.57■□□□□ 0.72
VEGFA-222ENST00000520948 C1orf127Q8N9H9 656 aa19.57■□□□□ 0.72
VEGFA-222ENST00000520948 CCDC127Q96BQ5 260 aa19.57■□□□□ 0.72
VEGFA-222ENST00000520948 FNBP1Q96RU3 617 aa19.57■□□□□ 0.72
VEGFA-222ENST00000520948 CHST7Q9NS84 486 aa19.57■□□□□ 0.72
VEGFA-222ENST00000520948 STK39Q9UEW8 545 aa19.57■□□□□ 0.72
VEGFA-222ENST00000520948 IKBKBO14920 756 aa19.56■□□□□ 0.72
VEGFA-222ENST00000520948 LETM1O95202 739 aaPredicted RBP19.56■□□□□ 0.72
VEGFA-222ENST00000520948 C4BPAP04003 597 aaKnown RBP19.56■□□□□ 0.72
VEGFA-222ENST00000520948 SOD2P04179 222 aa19.56■□□□□ 0.72
VEGFA-222ENST00000520948 DLATP10515 647 aaKnown RBP19.56■□□□□ 0.72
VEGFA-222ENST00000520948 TNNI1P19237 187 aa19.56■□□□□ 0.72
VEGFA-222ENST00000520948 AARSP49588 968 aaKnown RBP eCLIP19.56■□□□□ 0.721e-6■■■■□ 20.6
VEGFA-222ENST00000520948 VAMP7P51809 220 aa19.56■□□□□ 0.72
VEGFA-222ENST00000520948 CSGALNACT2Q8N6G5 542 aa19.56■□□□□ 0.72
VEGFA-222ENST00000520948 ACSF2Q96CM8 615 aaPredicted RBP19.56■□□□□ 0.72
VEGFA-222ENST00000520948 ANKRD36BP1Q96IX9 119 aa19.56■□□□□ 0.72
VEGFA-222ENST00000520948 FUCA2Q9BTY2 467 aa19.56■□□□□ 0.72
VEGFA-222ENST00000520948 SRRTQ9BXP5 876 aaKnown RBP19.56■□□□□ 0.72
VEGFA-222ENST00000520948 MTMR12Q9C0I1 747 aa19.56■□□□□ 0.72
VEGFA-222ENST00000520948 MRPL17Q9NRX2 175 aaKnown RBP19.56■□□□□ 0.72
VEGFA-222ENST00000520948 DACH1Q9UI36 760 aa19.56■□□□□ 0.72
VEGFA-222ENST00000520948 SIX4Q9UIU6 781 aa19.56■□□□□ 0.72
VEGFA-222ENST00000520948 LILRB3O75022 631 aa19.55■□□□□ 0.72
VEGFA-222ENST00000520948 URODP06132 367 aa19.55■□□□□ 0.72
VEGFA-222ENST00000520948 TMEM191BP0C7N4 346 aa19.55■□□□□ 0.72
VEGFA-222ENST00000520948 SCN1AP35498 2009 aa19.55■□□□□ 0.72
VEGFA-222ENST00000520948 BRCC3P46736 316 aa19.55■□□□□ 0.72
VEGFA-222ENST00000520948 NUBP1P53384 320 aa19.55■□□□□ 0.72
VEGFA-222ENST00000520948 AP3M2P53677 418 aa19.55■□□□□ 0.72
VEGFA-222ENST00000520948 BFSP1Q12934 665 aa19.55■□□□□ 0.72
VEGFA-222ENST00000520948 ASTLQ6HA08 431 aaPredicted RBP19.55■□□□□ 0.72
VEGFA-222ENST00000520948 C15orf39Q6ZRI6 1047 aa19.55■□□□□ 0.72
VEGFA-222ENST00000520948 TRAPPC11Q7Z392 1133 aa19.55■□□□□ 0.72
VEGFA-222ENST00000520948 FLCNQ8NFG4 579 aa19.55■□□□□ 0.72
VEGFA-222ENST00000520948 HASPINQ8TF76 798 aa19.55■□□□□ 0.72
VEGFA-222ENST00000520948 HERC2P3Q9BVR0 1158 aa19.55■□□□□ 0.72
VEGFA-222ENST00000520948 MAN1C1Q9NR34 630 aa19.55■□□□□ 0.72
VEGFA-222ENST00000520948 ANO10Q9NW15 660 aa19.55■□□□□ 0.72
VEGFA-222ENST00000520948 ITGA11Q9UKX5 1188 aa19.55■□□□□ 0.72
VEGFA-222ENST00000520948 CACNA1HO95180 2353 aa19.55■□□□□ 0.72
VEGFA-222ENST00000520948 SPTLC1O15269 473 aa19.54■□□□□ 0.72
VEGFA-222ENST00000520948 CST3P01034 146 aaPredicted RBP19.54■□□□□ 0.72
VEGFA-222ENST00000520948 EPB41P11171 864 aaKnown RBP19.54■□□□□ 0.72
VEGFA-222ENST00000520948 PAX3P23760 479 aa19.54■□□□□ 0.72
VEGFA-222ENST00000520948 MARSP56192 900 aaKnown RBP19.54■□□□□ 0.72
VEGFA-222ENST00000520948 LILRA4P59901 499 aa19.54■□□□□ 0.72
VEGFA-222ENST00000520948 TYRO3Q06418 890 aa19.54■□□□□ 0.72
VEGFA-222ENST00000520948 STX1AQ16623 288 aa19.54■□□□□ 0.72
VEGFA-222ENST00000520948 KIAA0319Q5VV43 1072 aa19.54■□□□□ 0.72
VEGFA-222ENST00000520948 OTOP3Q7RTS5 596 aa19.54■□□□□ 0.72
VEGFA-222ENST00000520948 FRMD5Q7Z6J6 570 aa19.54■□□□□ 0.72
VEGFA-222ENST00000520948 IRF2BP1Q8IU81 584 aa19.54■□□□□ 0.72
VEGFA-222ENST00000520948 GPR65Q8IYL9 337 aa19.54■□□□□ 0.72
VEGFA-222ENST00000520948 SUSD3Q96L08 255 aa19.54■□□□□ 0.72
VEGFA-222ENST00000520948 SF3B1O75533 1304 aaKnown RBP eCLIP19.53■□□□□ 0.726e-7■■■■■ 31.1
VEGFA-222ENST00000520948 VWA8A3KMH1 1905 aa19.53■□□□□ 0.72
VEGFA-222ENST00000520948 MYO15AQ9UKN7 3530 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms