RNA–Protein interactions for RNA: ENST00000520752.1

SHPRH-208, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 4

Gene SHPRH, Length 821 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-208ENST00000520752 MEGF10Q96KG7 1140 aa9.15□□□□□ -0.94
SHPRH-208ENST00000520752 NSMCE3Q96MG7 304 aa9.15□□□□□ -0.94
SHPRH-208ENST00000520752 NEUROD6Q96NK8 337 aa9.15□□□□□ -0.94
SHPRH-208ENST00000520752 C8orf37Q96NL8 207 aa9.15□□□□□ -0.94
SHPRH-208ENST00000520752 BIRC8Q96P09 236 aa9.15□□□□□ -0.94
SHPRH-208ENST00000520752 FANCD2OSQ96PS1 177 aa9.15□□□□□ -0.94
SHPRH-208ENST00000520752 GSDMAQ96QA5 445 aa9.15□□□□□ -0.94
SHPRH-208ENST00000520752 PYM1Q9BRP8 204 aaKnown RBP9.15□□□□□ -0.94
SHPRH-208ENST00000520752 ATXN3LQ9H3M9 355 aa9.15□□□□□ -0.94
SHPRH-208ENST00000520752 RBM12Q9NTZ6 932 aaKnown RBP9.15□□□□□ -0.94
SHPRH-208ENST00000520752 SEPT10Q9P0V9 454 aa9.15□□□□□ -0.94
SHPRH-208ENST00000520752 DMTF1Q9Y222 760 aa9.15□□□□□ -0.94
SHPRH-208ENST00000520752 TET3O43151 1660 aa9.15□□□□□ -0.94
SHPRH-208ENST00000520752 DLG5Q8TDM6 1919 aa9.15□□□□□ -0.95
SHPRH-208ENST00000520752 ABCC1P33527 1531 aa9.15□□□□□ -0.95
SHPRH-208ENST00000520752 MAGI1Q96QZ7 1491 aaPredicted RBP9.15□□□□□ -0.95
SHPRH-208ENST00000520752 XRN1Q8IZH2 1706 aaKnown RBP9.14□□□□□ -0.95
SHPRH-208ENST00000520752 MROH7-TTC4A0A0A0MT08 1334 aa9.14□□□□□ -0.95
SHPRH-208ENST00000520752 MYH7BA7E2Y1 1941 aa9.14□□□□□ -0.95
SHPRH-208ENST00000520752 FAM25EA8MYX2 175 aa9.14□□□□□ -0.95
SHPRH-208ENST00000520752 FAM47E-STBD1D6RA91 191 aa9.14□□□□□ -0.95
SHPRH-208ENST00000520752 F8W8V4 182 aa9.14□□□□□ -0.95
SHPRH-208ENST00000520752 MAPK13O15264 365 aa9.14□□□□□ -0.95
SHPRH-208ENST00000520752 ZWINTO95229 277 aa9.14□□□□□ -0.95
SHPRH-208ENST00000520752 ESRRBO95718 433 aa9.14□□□□□ -0.95
SHPRH-208ENST00000520752 APOEP02649 317 aa9.14□□□□□ -0.95
SHPRH-208ENST00000520752 HNRNPH3P31942 346 aaKnown RBP9.14□□□□□ -0.95
SHPRH-208ENST00000520752 GATA4P43694 442 aa9.14□□□□□ -0.95
SHPRH-208ENST00000520752 ACADSBP45954 432 aa9.14□□□□□ -0.95
SHPRH-208ENST00000520752 CRKP46108 304 aa9.14□□□□□ -0.95
SHPRH-208ENST00000520752 RPL5P46777 297 aaKnown RBP9.14□□□□□ -0.95
SHPRH-208ENST00000520752 ZNF132P52740 706 aa9.14□□□□□ -0.95
SHPRH-208ENST00000520752 ARFIP2P53365 341 aa9.14□□□□□ -0.95
SHPRH-208ENST00000520752 YARSP54577 528 aaKnown RBP9.14□□□□□ -0.95
SHPRH-208ENST00000520752 NMIQ13287 307 aaPredicted RBP9.14□□□□□ -0.95
SHPRH-208ENST00000520752 GIT2Q14161 759 aa9.14□□□□□ -0.95
SHPRH-208ENST00000520752 WIPI1Q5MNZ9 446 aaPredicted RBP9.14□□□□□ -0.95
SHPRH-208ENST00000520752 TTC39AQ5SRH9 613 aa9.14□□□□□ -0.95
SHPRH-208ENST00000520752 MAP3K21Q5TCX8 1036 aa9.14□□□□□ -0.95
SHPRH-208ENST00000520752 CCSAPQ6IQ19 270 aaPredicted RBP9.14□□□□□ -0.95
SHPRH-208ENST00000520752 LRRC8BQ6P9F7 803 aa9.14□□□□□ -0.95
SHPRH-208ENST00000520752 TTC23LQ6PF05 361 aa9.14□□□□□ -0.95
SHPRH-208ENST00000520752 KLHL35Q6PF15 583 aa9.14□□□□□ -0.95
SHPRH-208ENST00000520752 ARHGAP24Q8N264 748 aa9.14□□□□□ -0.95
SHPRH-208ENST00000520752 RIBC1Q8N443 379 aaPredicted RBP9.14□□□□□ -0.95
SHPRH-208ENST00000520752 ENAHQ8N8S7 591 aaPredicted RBP9.14□□□□□ -0.95
SHPRH-208ENST00000520752 SPATA5Q8NB90 893 aa9.14□□□□□ -0.95
SHPRH-208ENST00000520752 FBXO27Q8NI29 283 aa9.14□□□□□ -0.95
SHPRH-208ENST00000520752 NELFBQ8WX92 580 aa9.14□□□□□ -0.95
SHPRH-208ENST00000520752 SEC14L1Q92503 715 aa9.14□□□□□ -0.95
SHPRH-208ENST00000520752 UTP4Q969X6 686 aaKnown RBP9.14□□□□□ -0.95
SHPRH-208ENST00000520752 ELMO3Q96BJ8 720 aa9.14□□□□□ -0.95
SHPRH-208ENST00000520752 CLIP3Q96DZ5 547 aa9.14□□□□□ -0.95
SHPRH-208ENST00000520752 MED30Q96HR3 178 aa9.14□□□□□ -0.95
SHPRH-208ENST00000520752 PRPF18Q99633 342 aaKnown RBP9.14□□□□□ -0.95
SHPRH-208ENST00000520752 CHP1Q99653 195 aa9.14□□□□□ -0.95
SHPRH-208ENST00000520752 ROPN1BQ9BZX4 212 aaPredicted RBP9.14□□□□□ -0.95
SHPRH-208ENST00000520752 KLHL4Q9C0H6 718 aa9.14□□□□□ -0.95
SHPRH-208ENST00000520752 SLITRK6Q9H5Y7 841 aa9.14□□□□□ -0.95
SHPRH-208ENST00000520752 ROPN1Q9HAT0 212 aaPredicted RBP9.14□□□□□ -0.95
SHPRH-208ENST00000520752 PALMDQ9NP74 551 aa9.14□□□□□ -0.95
SHPRH-208ENST00000520752 USP40Q9NVE5 1235 aa9.14□□□□□ -0.95
SHPRH-208ENST00000520752 GIN1Q9NXP7 522 aa9.14□□□□□ -0.95
SHPRH-208ENST00000520752 UBP1Q9NZI7 540 aa9.14□□□□□ -0.95
SHPRH-208ENST00000520752 CRNNQ9UBG3 495 aaPredicted RBP9.14□□□□□ -0.95
SHPRH-208ENST00000520752 TRIM10Q9UDY6 481 aa9.14□□□□□ -0.95
SHPRH-208ENST00000520752 RWDD2AQ9UIY3 292 aa9.14□□□□□ -0.95
SHPRH-208ENST00000520752 TMEM59LQ9UK28 342 aa9.14□□□□□ -0.95
SHPRH-208ENST00000520752 AP4E1Q9UPM8 1137 aa9.14□□□□□ -0.95
SHPRH-208ENST00000520752 INPP5FQ9Y2H2 1132 aa9.14□□□□□ -0.95
SHPRH-208ENST00000520752 HIF3AQ9Y2N7 669 aa9.14□□□□□ -0.95
SHPRH-208ENST00000520752 TELO2Q9Y4R8 837 aa9.14□□□□□ -0.95
SHPRH-208ENST00000520752 IKBKGQ9Y6K9 419 aa9.14□□□□□ -0.95
SHPRH-208ENST00000520752 USH1CQ9Y6N9 552 aa9.14□□□□□ -0.95
SHPRH-208ENST00000520752 NEXMIFQ5QGS0 1516 aa9.14□□□□□ -0.95
SHPRH-208ENST00000520752 CD163L1Q9NR16 1453 aa9.14□□□□□ -0.95
SHPRH-208ENST00000520752 KIF1BO60333 1816 aa9.13□□□□□ -0.95
SHPRH-208ENST00000520752 DCDC2CA8MYV0 355 aa9.13□□□□□ -0.95
SHPRH-208ENST00000520752 CENPBD1B2RD01 187 aa9.13□□□□□ -0.95
SHPRH-208ENST00000520752 TMEM114B3SHH9 223 aa9.13□□□□□ -0.95
SHPRH-208ENST00000520752 H7C1D1 291 aa9.13□□□□□ -0.95
SHPRH-208ENST00000520752 CNOT3O75175 753 aaKnown RBP9.13□□□□□ -0.95
SHPRH-208ENST00000520752 TAF5LO75529 589 aa9.13□□□□□ -0.95
SHPRH-208ENST00000520752 OXSR1O95747 527 aaPredicted RBP9.13□□□□□ -0.95
SHPRH-208ENST00000520752 A1BGP04217 495 aa9.13□□□□□ -0.95
SHPRH-208ENST00000520752 UBTFL1P0CB47 393 aaPredicted RBP9.13□□□□□ -0.95
SHPRH-208ENST00000520752 RXRAP19793 462 aa9.13□□□□□ -0.95
SHPRH-208ENST00000520752 EEF1GP26641 437 aaKnown RBP9.13□□□□□ -0.95
SHPRH-208ENST00000520752 PTPN4P29074 926 aa9.13□□□□□ -0.95
SHPRH-208ENST00000520752 CRABP2P29373 138 aa9.13□□□□□ -0.95
SHPRH-208ENST00000520752 HMOX2P30519 316 aa9.13□□□□□ -0.95
SHPRH-208ENST00000520752 GTF2H1P32780 548 aa9.13□□□□□ -0.95
SHPRH-208ENST00000520752 SERPINB6P35237 376 aa9.13□□□□□ -0.95
SHPRH-208ENST00000520752 TNNI2P48788 182 aa9.13□□□□□ -0.95
SHPRH-208ENST00000520752 DNM2P50570 870 aa9.13□□□□□ -0.95
SHPRH-208ENST00000520752 BASP1P80723 227 aaKnown RBP9.13□□□□□ -0.95
SHPRH-208ENST00000520752 E2F2Q14209 437 aa9.13□□□□□ -0.95
SHPRH-208ENST00000520752 HLTFQ14527 1009 aaKnown RBP eCLIP9.13□□□□□ -0.95
SHPRH-208ENST00000520752 KRT31Q15323 416 aa9.13□□□□□ -0.95
SHPRH-208ENST00000520752 CWF19L2Q2TBE0 894 aaKnown RBP9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms