RNA–Protein interactions for RNA: ENST00000520630.1

CSMD1-209, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 5

Gene CSMD1, Length 312 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-209ENST00000520630 TMEM196Q5HYL7 178 aa8.79□□□□□ -1
CSMD1-209ENST00000520630 GLRA4Q5JXX5 417 aa8.79□□□□□ -1
CSMD1-209ENST00000520630 LARP1BQ659C4 914 aaKnown RBP8.79□□□□□ -1
CSMD1-209ENST00000520630 CPLX2Q6PUV4 134 aaKnown RBP8.79□□□□□ -1
CSMD1-209ENST00000520630 ANKS3Q6ZW76 656 aa8.79□□□□□ -1
CSMD1-209ENST00000520630 GAREM2Q75VX8 874 aa8.79□□□□□ -1
CSMD1-209ENST00000520630 PIP4P1Q86T03 277 aa8.79□□□□□ -1
CSMD1-209ENST00000520630 NOSTRINQ8IVI9 506 aa8.79□□□□□ -1
CSMD1-209ENST00000520630 ARID3BQ8IVW6 561 aaPredicted RBP8.79□□□□□ -1
CSMD1-209ENST00000520630 SYNPOQ8N3V7 929 aa8.79□□□□□ -1
CSMD1-209ENST00000520630 CSGALNACT1Q8TDX6 532 aa8.79□□□□□ -1
CSMD1-209ENST00000520630 MSANTD3Q96H12 275 aa8.79□□□□□ -1
CSMD1-209ENST00000520630 DYDC2Q96IM9 177 aa8.79□□□□□ -1
CSMD1-209ENST00000520630 HHIPQ96QV1 700 aa8.79□□□□□ -1
CSMD1-209ENST00000520630 LXNQ9BS40 222 aa8.79□□□□□ -1
CSMD1-209ENST00000520630 SLC26A6Q9BXS9 759 aa8.79□□□□□ -1
CSMD1-209ENST00000520630 FZD8Q9H461 694 aa8.79□□□□□ -1
CSMD1-209ENST00000520630 CYP4F11Q9HBI6 524 aa8.79□□□□□ -1
CSMD1-209ENST00000520630 FBXL5Q9UKA1 691 aa8.79□□□□□ -1
CSMD1-209ENST00000520630 PPME1Q9Y570 386 aa8.79□□□□□ -1
CSMD1-209ENST00000520630 COL6A6A6NMZ7 2263 aa8.78□□□□□ -1
CSMD1-209ENST00000520630 COL12A1Q99715 3063 aa8.78□□□□□ -1
CSMD1-209ENST00000520630 A0A1W2PRU2 124 aa8.78□□□□□ -1
CSMD1-209ENST00000520630 PRRG1O14668 218 aa8.78□□□□□ -1
CSMD1-209ENST00000520630 C1QL1O75973 258 aa8.78□□□□□ -1
CSMD1-209ENST00000520630 B3GAT3O94766 335 aa8.78□□□□□ -1
CSMD1-209ENST00000520630 SLITRK3O94933 977 aa8.78□□□□□ -1
CSMD1-209ENST00000520630 PRAMEF12O95522 483 aa8.78□□□□□ -1
CSMD1-209ENST00000520630 EGFP01133 1207 aa8.78□□□□□ -1
CSMD1-209ENST00000520630 ZSCAN22P10073 491 aaPredicted RBP8.78□□□□□ -1
CSMD1-209ENST00000520630 BCKDHBP21953 392 aa8.78□□□□□ -1
CSMD1-209ENST00000520630 MXD4Q14582 209 aaPredicted RBP8.78□□□□□ -1
CSMD1-209ENST00000520630 DAB2IPQ5VWQ8 1189 aa8.78□□□□□ -1
CSMD1-209ENST00000520630 MOXD1Q6UVY6 613 aa8.78□□□□□ -1
CSMD1-209ENST00000520630 PPP4R3CPQ6ZMV5 832 aa8.78□□□□□ -1
CSMD1-209ENST00000520630 RNF19BQ6ZMZ0 732 aa8.78□□□□□ -1
CSMD1-209ENST00000520630 FAM184AQ8NB25 1140 aa8.78□□□□□ -1
CSMD1-209ENST00000520630 DAGLBQ8NCG7 672 aa8.78□□□□□ -1
CSMD1-209ENST00000520630 RIN3Q8TB24 985 aa8.78□□□□□ -1
CSMD1-209ENST00000520630 BSNDQ8WZ55 320 aa8.78□□□□□ -1
CSMD1-209ENST00000520630 AIFM3Q96NN9 605 aa8.78□□□□□ -1
CSMD1-209ENST00000520630 RNF26Q9BY78 433 aaPredicted RBP8.78□□□□□ -1
CSMD1-209ENST00000520630 TMEM9BQ9NQ34 198 aa8.78□□□□□ -1
CSMD1-209ENST00000520630 GPRC5CQ9NQ84 441 aa8.78□□□□□ -1
CSMD1-209ENST00000520630 HPS4Q9NQG7 708 aa8.78□□□□□ -1
CSMD1-209ENST00000520630 INVSQ9Y283 1065 aa8.78□□□□□ -1
CSMD1-209ENST00000520630 ZNF462Q96JM2 2506 aa8.77□□□□□ -1.01
CSMD1-209ENST00000520630 RNF40O75150 1001 aa8.77□□□□□ -1.01
CSMD1-209ENST00000520630 DEXIO95424 95 aa8.77□□□□□ -1.01
CSMD1-209ENST00000520630 F13A1P00488 732 aa8.77□□□□□ -1.01
CSMD1-209ENST00000520630 PRB1P04280 392 aa8.77□□□□□ -1.01
CSMD1-209ENST00000520630 PDCP20941 246 aa8.77□□□□□ -1.01
CSMD1-209ENST00000520630 ARPP19P56211 112 aa8.77□□□□□ -1.01
CSMD1-209ENST00000520630 CYP4A11Q02928 519 aa8.77□□□□□ -1.01
CSMD1-209ENST00000520630 SCAPQ12770 1279 aa8.77□□□□□ -1.01
CSMD1-209ENST00000520630 EPHA7Q15375 998 aa8.77□□□□□ -1.01
CSMD1-209ENST00000520630 FAM187BQ17R55 369 aa8.77□□□□□ -1.01
CSMD1-209ENST00000520630 CYP4A22Q5TCH4 519 aa8.77□□□□□ -1.01
CSMD1-209ENST00000520630 FOXD4L5Q5VV16 416 aaPredicted RBP8.77□□□□□ -1.01
CSMD1-209ENST00000520630 PMS2CLQ68D20 193 aa8.77□□□□□ -1.01
CSMD1-209ENST00000520630 CDCA2Q69YH5 1023 aaPredicted RBP8.77□□□□□ -1.01
CSMD1-209ENST00000520630 C1orf228Q6PIY5 440 aa8.77□□□□□ -1.01
CSMD1-209ENST00000520630 ALKAL1Q6UXT8 129 aa8.77□□□□□ -1.01
CSMD1-209ENST00000520630 RAB44Q7Z6P3 723 aaPredicted RBP8.77□□□□□ -1.01
CSMD1-209ENST00000520630 EXOC8Q8IYI6 725 aa8.77□□□□□ -1.01
CSMD1-209ENST00000520630 HACE1Q8IYU2 909 aa8.77□□□□□ -1.01
CSMD1-209ENST00000520630 CHCHD4Q8N4Q1 142 aa8.77□□□□□ -1.01
CSMD1-209ENST00000520630 BEST2Q8NFU1 509 aa8.77□□□□□ -1.01
CSMD1-209ENST00000520630 CCDC12Q8WUD4 166 aaPredicted RBP8.77□□□□□ -1.01
CSMD1-209ENST00000520630 FOXD4L4Q8WXT5 416 aaPredicted RBP8.77□□□□□ -1.01
CSMD1-209ENST00000520630 KIF12Q96FN5 646 aa8.77□□□□□ -1.01
CSMD1-209ENST00000520630 CRELD1Q96HD1 420 aa8.77□□□□□ -1.01
CSMD1-209ENST00000520630 ZMAT2Q96NC0 199 aaKnown RBP8.77□□□□□ -1.01
CSMD1-209ENST00000520630 TMEM209Q96SK2 561 aa8.77□□□□□ -1.01
CSMD1-209ENST00000520630 POLR3CQ9BUI4 534 aaPredicted RBP8.77□□□□□ -1.01
CSMD1-209ENST00000520630 CCDC113Q9H0I3 377 aa8.77□□□□□ -1.01
CSMD1-209ENST00000520630 GJB4Q9NTQ9 266 aa8.77□□□□□ -1.01
CSMD1-209ENST00000520630 KIF3AQ9Y496 699 aa8.77□□□□□ -1.01
CSMD1-209ENST00000520630 CCDC194A0A1B0GVG4 234 aa8.76□□□□□ -1.01
CSMD1-209ENST00000520630 VPS37CA5D8V6 355 aaPredicted RBP8.76□□□□□ -1.01
CSMD1-209ENST00000520630 TRDMT1O14717 391 aaKnown RBP8.76□□□□□ -1.01
CSMD1-209ENST00000520630 PDIA4P13667 645 aaKnown RBP8.76□□□□□ -1.01
CSMD1-209ENST00000520630 U2AF2P26368 475 aaKnown RBP eCLIP8.76□□□□□ -1.01
CSMD1-209ENST00000520630 ELF1P32519 619 aa8.76□□□□□ -1.01
CSMD1-209ENST00000520630 FOSBP53539 338 aa8.76□□□□□ -1.01
CSMD1-209ENST00000520630 GUCY1B3Q02153 619 aa8.76□□□□□ -1.01
CSMD1-209ENST00000520630 RESTQ13127 1097 aa8.76□□□□□ -1.01
CSMD1-209ENST00000520630 SEMA3BQ13214 749 aa8.76□□□□□ -1.01
CSMD1-209ENST00000520630 TFDP1Q14186 410 aa8.76□□□□□ -1.01
CSMD1-209ENST00000520630 INF2Q27J81 1249 aa8.76□□□□□ -1.01
CSMD1-209ENST00000520630 UAP1L1Q3KQV9 507 aa8.76□□□□□ -1.01
CSMD1-209ENST00000520630 ARHGAP29Q52LW3 1261 aa8.76□□□□□ -1.01
CSMD1-209ENST00000520630 XKR4Q5GH76 650 aa8.76□□□□□ -1.01
CSMD1-209ENST00000520630 TPGS2Q68CL5 300 aa8.76□□□□□ -1.01
CSMD1-209ENST00000520630 CLEC17AQ6ZS10 378 aa8.76□□□□□ -1.01
CSMD1-209ENST00000520630 TRIM22Q8IYM9 498 aa8.76□□□□□ -1.01
CSMD1-209ENST00000520630 CAMKK1Q8N5S9 505 aa8.76□□□□□ -1.01
CSMD1-209ENST00000520630 TTC9BQ8N6N2 239 aa8.76□□□□□ -1.01
CSMD1-209ENST00000520630 CEP120Q8N960 986 aa8.76□□□□□ -1.01
CSMD1-209ENST00000520630 FBXO18Q8NFZ0 1043 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms