RNA–Protein interactions for RNA: ENST00000520561.1

CSMD1-208, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-208ENST00000520561 ANXA13P27216 316 aa9.57□□□□□ -0.88
CSMD1-208ENST00000520561 GNA15P30679 374 aa9.57□□□□□ -0.88
CSMD1-208ENST00000520561 LILRA4P59901 499 aa9.57□□□□□ -0.88
CSMD1-208ENST00000520561 PTK2Q05397 1052 aa9.57□□□□□ -0.88
CSMD1-208ENST00000520561 INCA1Q0VD86 236 aa9.57□□□□□ -0.88
CSMD1-208ENST00000520561 TMEM240Q5SV17 173 aa9.57□□□□□ -0.88
CSMD1-208ENST00000520561 SPOUT1Q5T280 376 aaKnown RBP9.57□□□□□ -0.88
CSMD1-208ENST00000520561 FAM117BQ6P1L5 589 aa9.57□□□□□ -0.88
CSMD1-208ENST00000520561 WDR59Q6PJI9 974 aa9.57□□□□□ -0.88
CSMD1-208ENST00000520561 DCLRE1AQ6PJP8 1040 aa9.57□□□□□ -0.88
CSMD1-208ENST00000520561 DPH6Q7L8W6 267 aa9.57□□□□□ -0.88
CSMD1-208ENST00000520561 TMEM139Q8IV31 216 aa9.57□□□□□ -0.88
CSMD1-208ENST00000520561 COLGALT2Q8IYK4 626 aa9.57□□□□□ -0.88
CSMD1-208ENST00000520561 CMTR2Q8IYT2 770 aaKnown RBP9.57□□□□□ -0.88
CSMD1-208ENST00000520561 CCDC170Q8IYT3 715 aa9.57□□□□□ -0.88
CSMD1-208ENST00000520561 ADGRF2Q8IZF7 708 aa9.57□□□□□ -0.88
CSMD1-208ENST00000520561 CRIPAKQ8N1N5 446 aa9.57□□□□□ -0.88
CSMD1-208ENST00000520561 TOP6BLQ8N6T0 577 aa9.57□□□□□ -0.88
CSMD1-208ENST00000520561 UBR7Q8N806 425 aa9.57□□□□□ -0.88
CSMD1-208ENST00000520561 APPL2Q8NEU8 664 aa9.57□□□□□ -0.88
CSMD1-208ENST00000520561 CCDC42Q96M95 316 aa9.57□□□□□ -0.88
CSMD1-208ENST00000520561 SLC9A7Q96T83 725 aa9.57□□□□□ -0.88
CSMD1-208ENST00000520561 YME1L1Q96TA2 773 aa9.57□□□□□ -0.88
CSMD1-208ENST00000520561 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.57□□□□□ -0.88
CSMD1-208ENST00000520561 COLEC11Q9BWP8 271 aa9.57□□□□□ -0.88
CSMD1-208ENST00000520561 SNX25Q9H3E2 840 aa9.57□□□□□ -0.88
CSMD1-208ENST00000520561 NRDE2Q9H7Z3 1164 aa9.57□□□□□ -0.88
CSMD1-208ENST00000520561 NHEJ1Q9H9Q4 299 aaPredicted RBP9.57□□□□□ -0.88
CSMD1-208ENST00000520561 PRG3Q9Y2Y8 225 aaPredicted RBP9.57□□□□□ -0.88
CSMD1-208ENST00000520561 CYB561D2O14569 222 aa9.56□□□□□ -0.88
CSMD1-208ENST00000520561 SPTLC1O15269 473 aa9.56□□□□□ -0.88
CSMD1-208ENST00000520561 CYP26A1O43174 497 aa9.56□□□□□ -0.88
CSMD1-208ENST00000520561 TRAPPC3O43617 180 aa9.56□□□□□ -0.88
CSMD1-208ENST00000520561 AKR1B10O60218 316 aa9.56□□□□□ -0.88
CSMD1-208ENST00000520561 CILPO75339 1184 aa9.56□□□□□ -0.88
CSMD1-208ENST00000520561 TACC1O75410 805 aa9.56□□□□□ -0.88
CSMD1-208ENST00000520561 EIF4A3P38919 411 aaKnown RBP9.56□□□□□ -0.88
CSMD1-208ENST00000520561 AARSP49588 968 aaKnown RBP eCLIP9.56□□□□□ -0.88
CSMD1-208ENST00000520561 CDH8P55286 799 aa9.56□□□□□ -0.88
CSMD1-208ENST00000520561 MAPK8IP2Q13387 824 aaPredicted RBP9.56□□□□□ -0.88
CSMD1-208ENST00000520561 BTG3Q14201 252 aaPredicted RBP9.56□□□□□ -0.88
CSMD1-208ENST00000520561 ZNF394Q53GI3 561 aa9.56□□□□□ -0.88
CSMD1-208ENST00000520561 HGSNATQ68CP4 663 aa9.56□□□□□ -0.88
CSMD1-208ENST00000520561 IRF2BP2Q7Z5L9 587 aa9.56□□□□□ -0.88
CSMD1-208ENST00000520561 METTL23Q86XA0 190 aa9.56□□□□□ -0.88
CSMD1-208ENST00000520561 ZNF280BQ86YH2 543 aa9.56□□□□□ -0.88
CSMD1-208ENST00000520561 TMEM86AQ8N2M4 240 aa9.56□□□□□ -0.88
CSMD1-208ENST00000520561 C3orf58Q8NDZ4 430 aa9.56□□□□□ -0.88
CSMD1-208ENST00000520561 OR6B3Q8NGW1 331 aa9.56□□□□□ -0.88
CSMD1-208ENST00000520561 SPATA18Q8TC71 538 aa9.56□□□□□ -0.88
CSMD1-208ENST00000520561 EPS8L1Q8TE68 723 aa9.56□□□□□ -0.88
CSMD1-208ENST00000520561 HASPINQ8TF76 798 aa9.56□□□□□ -0.88
CSMD1-208ENST00000520561 HERVK_113Q902F9 699 aa9.56□□□□□ -0.88
CSMD1-208ENST00000520561 SENP8Q96LD8 212 aa9.56□□□□□ -0.88
CSMD1-208ENST00000520561 CHP1Q99653 195 aa9.56□□□□□ -0.88
CSMD1-208ENST00000520561 PAAF1Q9BRP4 392 aa9.56□□□□□ -0.88
CSMD1-208ENST00000520561 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.56□□□□□ -0.88
CSMD1-208ENST00000520561 NT5C1AQ9BXI3 368 aa9.56□□□□□ -0.88
CSMD1-208ENST00000520561 SDCBP2Q9H190 292 aa9.56□□□□□ -0.88
CSMD1-208ENST00000520561 HAUS4Q9H6D7 363 aa9.56□□□□□ -0.88
CSMD1-208ENST00000520561 LUC7LQ9NQ29 371 aaKnown RBP9.56□□□□□ -0.88
CSMD1-208ENST00000520561 SEPT11Q9NVA2 429 aaKnown RBP9.56□□□□□ -0.88
CSMD1-208ENST00000520561 PCDH10Q9P2E7 1040 aa9.56□□□□□ -0.88
CSMD1-208ENST00000520561 ARHGAP20Q9P2F6 1191 aa9.56□□□□□ -0.88
CSMD1-208ENST00000520561 DNAJB4Q9UDY4 337 aa9.56□□□□□ -0.88
CSMD1-208ENST00000520561 PUF60Q9UHX1 559 aaKnown RBP9.56□□□□□ -0.88
CSMD1-208ENST00000520561 DSEQ9UL01 958 aa9.56□□□□□ -0.88
CSMD1-208ENST00000520561 BARX2Q9UMQ3 279 aaPredicted RBP9.56□□□□□ -0.88
CSMD1-208ENST00000520561 L1RE1Q9UN81 338 aa9.56□□□□□ -0.88
CSMD1-208ENST00000520561 CNTN6Q9UQ52 1028 aa9.56□□□□□ -0.88
CSMD1-208ENST00000520561 ZKSCAN5Q9Y2L8 839 aa9.56□□□□□ -0.88
CSMD1-208ENST00000520561 FNDC1Q4ZHG4 1894 aaPredicted RBP9.55□□□□□ -0.88
CSMD1-208ENST00000520561 COL4A6Q14031 1691 aa9.55□□□□□ -0.88
CSMD1-208ENST00000520561 SCN1AP35498 2009 aa9.55□□□□□ -0.88
CSMD1-208ENST00000520561 A8MXQ7 604 aa9.55□□□□□ -0.88
CSMD1-208ENST00000520561 NRP1O14786 923 aa9.55□□□□□ -0.88
CSMD1-208ENST00000520561 THAP12O43422 761 aa9.55□□□□□ -0.88
CSMD1-208ENST00000520561 MED7O43513 233 aa9.55□□□□□ -0.88
CSMD1-208ENST00000520561 B4GALT3O60512 393 aa9.55□□□□□ -0.88
CSMD1-208ENST00000520561 TADA2AO75478 443 aa9.55□□□□□ -0.88
CSMD1-208ENST00000520561 ALDH2P05091 517 aa9.55□□□□□ -0.88
CSMD1-208ENST00000520561 PLEKP08567 350 aaPredicted RBP9.55□□□□□ -0.88
CSMD1-208ENST00000520561 PAEPP09466 180 aa9.55□□□□□ -0.88
CSMD1-208ENST00000520561 FAM163BP0C2L3 166 aa9.55□□□□□ -0.88
CSMD1-208ENST00000520561 CD19P15391 556 aa9.55□□□□□ -0.88
CSMD1-208ENST00000520561 CYP11B1P15538 503 aa9.55□□□□□ -0.88
CSMD1-208ENST00000520561 LAG3P18627 525 aa9.55□□□□□ -0.88
CSMD1-208ENST00000520561 TNFAIP3P21580 790 aa9.55□□□□□ -0.88
CSMD1-208ENST00000520561 WARSP23381 471 aaKnown RBP9.55□□□□□ -0.88
CSMD1-208ENST00000520561 CLCN1P35523 988 aa9.55□□□□□ -0.88
CSMD1-208ENST00000520561 BRCC3P46736 316 aa9.55□□□□□ -0.88
CSMD1-208ENST00000520561 LHX1P48742 406 aa9.55□□□□□ -0.88
CSMD1-208ENST00000520561 SLC11A1P49279 550 aa9.55□□□□□ -0.88
CSMD1-208ENST00000520561 KIF11P52732 1056 aa9.55□□□□□ -0.88
CSMD1-208ENST00000520561 ZNF132P52740 706 aa9.55□□□□□ -0.88
CSMD1-208ENST00000520561 NDST1P52848 882 aa9.55□□□□□ -0.88
CSMD1-208ENST00000520561 EPHB4P54760 987 aa9.55□□□□□ -0.88
CSMD1-208ENST00000520561 ELAVL2Q12926 359 aaKnown RBP9.55□□□□□ -0.88
CSMD1-208ENST00000520561 BMS1Q14692 1282 aaKnown RBP9.55□□□□□ -0.88
CSMD1-208ENST00000520561 SPA17Q15506 151 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms