RNA–Protein interactions for RNA: ENST00000519401.5

SPIDR-211, Transcript of scaffold protein involved in DNA repair, human

TSL 2

Gene SPIDR, Length 2,090 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-211	ENST00000519401	MLXIPL	Q9NP71	852 aa		12.01	□□□□□ -0.49
SPIDR-211	ENST00000519401	ARL8B	Q9NVJ2	186 aa		12.01	□□□□□ -0.49
SPIDR-211	ENST00000519401	GID8	Q9NWU2	228 aa		12.01	□□□□□ -0.49
SPIDR-211	ENST00000519401	RRN3	Q9NYV6	651 aa		12.01	□□□□□ -0.49
SPIDR-211	ENST00000519401	RSL24D1	Q9UHA3	163 aa	Known RBP	12.01	□□□□□ -0.49
SPIDR-211	ENST00000519401	ADAMTS1	Q9UHI8	967 aa		12.01	□□□□□ -0.49
SPIDR-211	ENST00000519401	CEPT1	Q9Y6K0	416 aa		12.01	□□□□□ -0.49
SPIDR-211	ENST00000519401	ZMYM2	Q9UBW7	1377 aa		12.01	□□□□□ -0.49
SPIDR-211	ENST00000519401	SLX4	Q8IY92	1834 aa		12	□□□□□ -0.49
SPIDR-211	ENST00000519401	CASQ2	O14958	399 aa	Predicted RBP	12	□□□□□ -0.49
SPIDR-211	ENST00000519401	PDE8A	O60658	829 aa		12	□□□□□ -0.49
SPIDR-211	ENST00000519401	MTRF1	O75570	445 aa	Known RBP	12	□□□□□ -0.49
SPIDR-211	ENST00000519401	TM7SF2	O76062	418 aa		12	□□□□□ -0.49
SPIDR-211	ENST00000519401	TTC4	O95801	387 aa		12	□□□□□ -0.49
SPIDR-211	ENST00000519401	ESRRA	P11474	423 aa	Predicted RBP	12	□□□□□ -0.49
SPIDR-211	ENST00000519401	KCNA2	P16389	499 aa		12	□□□□□ -0.49
SPIDR-211	ENST00000519401	ZAP70	P43403	619 aa		12	□□□□□ -0.49
SPIDR-211	ENST00000519401	PRELP	P51888	382 aa		12	□□□□□ -0.49
SPIDR-211	ENST00000519401	TMEM266	Q2M3C6	531 aa		12	□□□□□ -0.49
SPIDR-211	ENST00000519401	DNAL1	Q4LDG9	190 aa		12	□□□□□ -0.49
SPIDR-211	ENST00000519401	CATIP	Q7Z7H3	387 aa		12	□□□□□ -0.49
SPIDR-211	ENST00000519401	USP6NL	Q92738	828 aa		12	□□□□□ -0.49
SPIDR-211	ENST00000519401	CTRC	Q99895	268 aa		12	□□□□□ -0.49
SPIDR-211	ENST00000519401	CCDC77	Q9BR77	488 aa		12	□□□□□ -0.49
SPIDR-211	ENST00000519401	HNRNPUL1	Q9BUJ2	856 aa	Known RBP eCLIP	12	□□□□□ -0.49
SPIDR-211	ENST00000519401	PLA2G12B	Q9BX93	195 aa		12	□□□□□ -0.49
SPIDR-211	ENST00000519401	VTA1	Q9NP79	307 aa		12	□□□□□ -0.49
SPIDR-211	ENST00000519401	ANKFY1	Q9P2R3	1169 aa		12	□□□□□ -0.49
SPIDR-211	ENST00000519401	RABL2A	Q9UBK7	228 aa	Predicted RBP	12	□□□□□ -0.49
SPIDR-211	ENST00000519401	LZTS1	Q9Y250	596 aa		12	□□□□□ -0.49
SPIDR-211	ENST00000519401	FAM205C	A6NFA0	338 aa		11.99	□□□□□ -0.49
SPIDR-211	ENST00000519401		B4E1Z4	1266 aa		11.99	□□□□□ -0.49
SPIDR-211	ENST00000519401		H3BNX3	289 aa		11.99	□□□□□ -0.49
SPIDR-211	ENST00000519401	ZNF701	M0R085	212 aa	Predicted RBP	11.99	□□□□□ -0.49
SPIDR-211	ENST00000519401	NFKBIE	O00221	500 aa		11.99	□□□□□ -0.49
SPIDR-211	ENST00000519401	DDX3Y	O15523	660 aa	Known RBP	11.99	□□□□□ -0.49
SPIDR-211	ENST00000519401	PABPC1	P11940	636 aa	Known RBP	11.99	□□□□□ -0.49
SPIDR-211	ENST00000519401	E2F2	Q14209	437 aa		11.99	□□□□□ -0.49
SPIDR-211	ENST00000519401	IL17A	Q16552	155 aa		11.99	□□□□□ -0.49
SPIDR-211	ENST00000519401	ZNF829	Q3KNS6	432 aa	Predicted RBP	11.99	□□□□□ -0.49
SPIDR-211	ENST00000519401	RIPOR1	Q6ZS17	1223 aa		11.99	□□□□□ -0.49
SPIDR-211	ENST00000519401	CABP7	Q86V35	215 aa		11.99	□□□□□ -0.49
SPIDR-211	ENST00000519401	RHOT2	Q8IXI1	618 aa		11.99	□□□□□ -0.49
SPIDR-211	ENST00000519401	RPGR	Q92834	1020 aa	Known RBP	11.99	□□□□□ -0.49
SPIDR-211	ENST00000519401	OTUD5	Q96G74	571 aa		11.99	□□□□□ -0.49
SPIDR-211	ENST00000519401	OLFM1	Q99784	485 aa		11.99	□□□□□ -0.49
SPIDR-211	ENST00000519401	GPATCH1	Q9BRR8	931 aa	Known RBP	11.99	□□□□□ -0.49
SPIDR-211	ENST00000519401	KLC2	Q9H0B6	622 aa		11.99	□□□□□ -0.49
SPIDR-211	ENST00000519401	CCDC68	Q9H2F9	335 aa		11.99	□□□□□ -0.49
SPIDR-211	ENST00000519401	TUT1	Q9H6E5	874 aa	Known RBP	11.99	□□□□□ -0.49
SPIDR-211	ENST00000519401	WHRN	Q9P202	907 aa		11.99	□□□□□ -0.49
SPIDR-211	ENST00000519401	MTO1	Q9Y2Z2	717 aa	Known RBP	11.99	□□□□□ -0.49
SPIDR-211	ENST00000519401	SQOR	Q9Y6N5	450 aa		11.99	□□□□□ -0.49
SPIDR-211	ENST00000519401	CCDC88A	Q3V6T2	1871 aa		11.99	□□□□□ -0.49
SPIDR-211	ENST00000519401	SYNGAP1	Q96PV0	1343 aa		11.99	□□□□□ -0.49
SPIDR-211	ENST00000519401	ADCY6	O43306	1168 aa		11.99	□□□□□ -0.49
SPIDR-211	ENST00000519401	CLASP2	O75122	1294 aa	Known RBP	11.99	□□□□□ -0.49
SPIDR-211	ENST00000519401	IDH1	O75874	414 aa	Known RBP	11.99	□□□□□ -0.49
SPIDR-211	ENST00000519401	MYCLP1	P12525	358 aa	Predicted RBP	11.99	□□□□□ -0.49
SPIDR-211	ENST00000519401	CTNNA2	P26232	953 aa		11.99	□□□□□ -0.49
SPIDR-211	ENST00000519401	CETN2	P41208	172 aa		11.99	□□□□□ -0.49
SPIDR-211	ENST00000519401	PRKCI	P41743	596 aa		11.99	□□□□□ -0.49
SPIDR-211	ENST00000519401	CSE1L	P55060	971 aa	Known RBP	11.99	□□□□□ -0.49
SPIDR-211	ENST00000519401	PDE4D	Q08499	809 aa		11.99	□□□□□ -0.49
SPIDR-211	ENST00000519401	STAT4	Q14765	748 aa		11.99	□□□□□ -0.49
SPIDR-211	ENST00000519401	HERC4	Q5GLZ8	1057 aa	Predicted RBP	11.99	□□□□□ -0.49
SPIDR-211	ENST00000519401	EARS2	Q5JPH6	523 aa	Known RBP	11.99	□□□□□ -0.49
SPIDR-211	ENST00000519401	FAM209A	Q5JX71	171 aa		11.99	□□□□□ -0.49
SPIDR-211	ENST00000519401	SPOPL	Q6IQ16	392 aa		11.99	□□□□□ -0.49
SPIDR-211	ENST00000519401	TMEM214	Q6NUQ4	689 aa	Known RBP	11.99	□□□□□ -0.49
SPIDR-211	ENST00000519401	DCLRE1A	Q6PJP8	1040 aa		11.99	□□□□□ -0.49
SPIDR-211	ENST00000519401	RAPH1	Q70E73	1250 aa		11.99	□□□□□ -0.49
SPIDR-211	ENST00000519401	SLC7A5P1	Q8MH63	180 aa		11.99	□□□□□ -0.49
SPIDR-211	ENST00000519401	LZTR1	Q8N653	840 aa		11.99	□□□□□ -0.49
SPIDR-211	ENST00000519401	PTCD2	Q8WV60	388 aa	Known RBP	11.99	□□□□□ -0.49
SPIDR-211	ENST00000519401	JADE3	Q92613	823 aa		11.99	□□□□□ -0.49
SPIDR-211	ENST00000519401	GLG1	Q92896	1179 aa		11.99	□□□□□ -0.49
SPIDR-211	ENST00000519401	MYL10	Q9BUA6	226 aa		11.99	□□□□□ -0.49
SPIDR-211	ENST00000519401	SEMA6B	Q9H3T3	888 aa		11.99	□□□□□ -0.49
SPIDR-211	ENST00000519401	S100A14	Q9HCY8	104 aa		11.99	□□□□□ -0.49
SPIDR-211	ENST00000519401	RIC8A	Q9NPQ8	531 aa		11.99	□□□□□ -0.49
SPIDR-211	ENST00000519401	IGF2BP1	Q9NZI8	577 aa	Known RBP eCLIP	11.99	□□□□□ -0.49
SPIDR-211	ENST00000519401	IGSF9	Q9P2J2	1179 aa		11.99	□□□□□ -0.49
SPIDR-211	ENST00000519401	NAGPA	Q9UK23	515 aa		11.99	□□□□□ -0.49
SPIDR-211	ENST00000519401	SATB2	Q9UPW6	733 aa		11.99	□□□□□ -0.49
SPIDR-211	ENST00000519401	SBDS	Q9Y3A5	250 aa	Known RBP eCLIP	11.99	□□□□□ -0.49
SPIDR-211	ENST00000519401	PFDN6	O15212	129 aa		11.98	□□□□□ -0.49
SPIDR-211	ENST00000519401	KMO	O15229	486 aa		11.98	□□□□□ -0.49
SPIDR-211	ENST00000519401	ITM2A	O43736	263 aa		11.98	□□□□□ -0.49
SPIDR-211	ENST00000519401	TGDS	O95455	350 aa		11.98	□□□□□ -0.49
SPIDR-211	ENST00000519401	CSF1R	P07333	972 aa		11.98	□□□□□ -0.49
SPIDR-211	ENST00000519401	GSS	P48637	474 aa		11.98	□□□□□ -0.49
SPIDR-211	ENST00000519401	EIF2B2	P49770	351 aa	Known RBP	11.98	□□□□□ -0.49
SPIDR-211	ENST00000519401	AMPD3	Q01432	767 aa		11.98	□□□□□ -0.49
SPIDR-211	ENST00000519401	CAV1	Q03135	178 aa		11.98	□□□□□ -0.49
SPIDR-211	ENST00000519401	RAPGEF1	Q13905	1077 aa		11.98	□□□□□ -0.49
SPIDR-211	ENST00000519401	NR1D2	Q14995	579 aa		11.98	□□□□□ -0.49
SPIDR-211	ENST00000519401	SUZ12	Q15022	739 aa	Known RBP	11.98	□□□□□ -0.49
SPIDR-211	ENST00000519401	CYP1B1	Q16678	543 aa		11.98	□□□□□ -0.49
SPIDR-211	ENST00000519401	CCDC14	Q49A88	953 aa		11.98	□□□□□ -0.49

Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms