RNA–Protein interactions for RNA: ENST00000519115.5

SDCBP-206, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-206ENST00000519115 JADE1Q6IE81 842 aa8.19□□□□□ -1.1
SDCBP-206ENST00000519115 KIAA1841Q6NSI8 718 aa8.19□□□□□ -1.1
SDCBP-206ENST00000519115 PRSS55Q6UWB4 352 aaPredicted RBP8.19□□□□□ -1.1
SDCBP-206ENST00000519115 CRELD2Q6UXH1 353 aaPredicted RBP8.19□□□□□ -1.1
SDCBP-206ENST00000519115 CNGA4Q8IV77 575 aa8.19□□□□□ -1.1
SDCBP-206ENST00000519115 GLYCTKQ8IVS8 523 aa8.19□□□□□ -1.1
SDCBP-206ENST00000519115 RNF168Q8IYW5 571 aaPredicted RBP8.19□□□□□ -1.1
SDCBP-206ENST00000519115 EFHBQ8N7U6 833 aa8.19□□□□□ -1.1
SDCBP-206ENST00000519115 MRPL43Q8N983 215 aaKnown RBP8.19□□□□□ -1.1
SDCBP-206ENST00000519115 XXYLT1Q8NBI6 393 aa8.19□□□□□ -1.1
SDCBP-206ENST00000519115 TMC2Q8TDI7 906 aa8.19□□□□□ -1.1
SDCBP-206ENST00000519115 RIN2Q8WYP3 895 aaPredicted RBP8.19□□□□□ -1.1
SDCBP-206ENST00000519115 FAM84AQ96KN4 292 aa8.19□□□□□ -1.1
SDCBP-206ENST00000519115 CNOT6LQ96LI5 555 aaKnown RBP8.19□□□□□ -1.1
SDCBP-206ENST00000519115 FAM81BQ96LP2 452 aa8.19□□□□□ -1.1
SDCBP-206ENST00000519115 FAM213AQ9BRX8 229 aa8.19□□□□□ -1.1
SDCBP-206ENST00000519115 NAA15Q9BXJ9 866 aaKnown RBP8.19□□□□□ -1.1
SDCBP-206ENST00000519115 PLCB1Q9NQ66 1216 aa8.19□□□□□ -1.1
SDCBP-206ENST00000519115 COG5Q9UP83 839 aa8.19□□□□□ -1.1
SDCBP-206ENST00000519115 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.19□□□□□ -1.1
SDCBP-206ENST00000519115 SF3B1O75533 1304 aaKnown RBP eCLIP8.19□□□□□ -1.1
SDCBP-206ENST00000519115 PKD1L2Q7Z442 2459 aa8.19□□□□□ -1.1
SDCBP-206ENST00000519115 UNC79Q9P2D8 2635 aa8.18□□□□□ -1.1
SDCBP-206ENST00000519115 C5orf42Q9H799 3197 aa8.18□□□□□ -1.1
SDCBP-206ENST00000519115 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.18□□□□□ -1.1
SDCBP-206ENST00000519115 TRIM49BA6NDI0 452 aa8.18□□□□□ -1.1
SDCBP-206ENST00000519115 PPEF2O14830 753 aa8.18□□□□□ -1.1
SDCBP-206ENST00000519115 CLIC2O15247 247 aa8.18□□□□□ -1.1
SDCBP-206ENST00000519115 CLASP2O75122 1294 aaKnown RBP8.18□□□□□ -1.1
SDCBP-206ENST00000519115 EFEMP2O95967 443 aa8.18□□□□□ -1.1
SDCBP-206ENST00000519115 TUBB4AP04350 444 aa8.18□□□□□ -1.1
SDCBP-206ENST00000519115 CNPP09543 421 aaKnown RBP8.18□□□□□ -1.1
SDCBP-206ENST00000519115 EPCAMP16422 314 aa8.18□□□□□ -1.1
SDCBP-206ENST00000519115 RPL17P18621 184 aaKnown RBP8.18□□□□□ -1.1
SDCBP-206ENST00000519115 TKTP29401 623 aaKnown RBP8.18□□□□□ -1.1
SDCBP-206ENST00000519115 MTIF2P46199 727 aaKnown RBP8.18□□□□□ -1.1
SDCBP-206ENST00000519115 CYP2J2P51589 502 aa8.18□□□□□ -1.1
SDCBP-206ENST00000519115 UBXN1Q04323 297 aa8.18□□□□□ -1.1
SDCBP-206ENST00000519115 CETN1Q12798 172 aa8.18□□□□□ -1.1
SDCBP-206ENST00000519115 ADAM15Q13444 863 aa8.18□□□□□ -1.1
SDCBP-206ENST00000519115 TMEM132DQ14C87 1099 aa8.18□□□□□ -1.1
SDCBP-206ENST00000519115 UPP1Q16831 310 aa8.18□□□□□ -1.1
SDCBP-206ENST00000519115 USP41Q3LFD5 358 aa8.18□□□□□ -1.1
SDCBP-206ENST00000519115 MIIPQ5JXC2 388 aa8.18□□□□□ -1.1
SDCBP-206ENST00000519115 RTP2Q5QGT7 225 aa8.18□□□□□ -1.1
SDCBP-206ENST00000519115 FAM171A1Q5VUB5 890 aa8.18□□□□□ -1.1
SDCBP-206ENST00000519115 CD300LGQ6UXG3 332 aa8.18□□□□□ -1.1
SDCBP-206ENST00000519115 CEP57Q86XR8 500 aa8.18□□□□□ -1.1
SDCBP-206ENST00000519115 EFCAB13Q8IY85 973 aa8.18□□□□□ -1.1
SDCBP-206ENST00000519115 ZNF397Q8NF99 534 aaPredicted RBP8.18□□□□□ -1.1
SDCBP-206ENST00000519115 ATXN2LQ8WWM7 1075 aaKnown RBP8.18□□□□□ -1.1
SDCBP-206ENST00000519115 SYN2Q92777 582 aaPredicted RBP8.18□□□□□ -1.1
SDCBP-206ENST00000519115 FAXDC2Q96IV6 333 aa8.18□□□□□ -1.1
SDCBP-206ENST00000519115 MFSD14AQ96MC6 490 aa8.18□□□□□ -1.1
SDCBP-206ENST00000519115 UROC1Q96N76 676 aa8.18□□□□□ -1.1
SDCBP-206ENST00000519115 ASB2Q96Q27 587 aa8.18□□□□□ -1.1
SDCBP-206ENST00000519115 PANX2Q96RD6 677 aa8.18□□□□□ -1.1
SDCBP-206ENST00000519115 APOL5Q9BWW9 433 aa8.18□□□□□ -1.1
SDCBP-206ENST00000519115 PLEKHA5Q9HAU0 1116 aa8.18□□□□□ -1.1
SDCBP-206ENST00000519115 MRPL17Q9NRX2 175 aaKnown RBP8.18□□□□□ -1.1
SDCBP-206ENST00000519115 HSPBP1Q9NZL4 362 aa8.18□□□□□ -1.1
SDCBP-206ENST00000519115 CAPN11Q9UMQ6 739 aa8.18□□□□□ -1.1
SDCBP-206ENST00000519115 UBQLN1Q9UMX0 589 aaKnown RBP8.18□□□□□ -1.1
SDCBP-206ENST00000519115 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.18□□□□□ -1.1
SDCBP-206ENST00000519115 HCFC2Q9Y5Z7 792 aa8.18□□□□□ -1.1
SDCBP-206ENST00000519115 DENND4AQ7Z401 1863 aa8.17□□□□□ -1.1
SDCBP-206ENST00000519115 TMEM189-UBE2V1I3L0A0 370 aa8.17□□□□□ -1.1
SDCBP-206ENST00000519115 TEX28O15482 410 aa8.17□□□□□ -1.1
SDCBP-206ENST00000519115 NCK2O43639 380 aa8.17□□□□□ -1.1
SDCBP-206ENST00000519115 EXTL3O43909 919 aa8.17□□□□□ -1.1
SDCBP-206ENST00000519115 LILRB3O75022 631 aa8.17□□□□□ -1.1
SDCBP-206ENST00000519115 AKAP3O75969 853 aa8.17□□□□□ -1.1
SDCBP-206ENST00000519115 PTMAP06454 111 aaKnown RBP8.17□□□□□ -1.1
SDCBP-206ENST00000519115 ADRB2P07550 413 aa8.17□□□□□ -1.1
SDCBP-206ENST00000519115 KRT13P13646 458 aa8.17□□□□□ -1.1
SDCBP-206ENST00000519115 RFX1P22670 979 aa8.17□□□□□ -1.1
SDCBP-206ENST00000519115 FECHP22830 423 aa8.17□□□□□ -1.1
SDCBP-206ENST00000519115 KLRC2P26717 231 aa8.17□□□□□ -1.1
SDCBP-206ENST00000519115 HNRNPH3P31942 346 aaKnown RBP8.17□□□□□ -1.1
SDCBP-206ENST00000519115 CDK17Q00537 523 aa8.17□□□□□ -1.1
SDCBP-206ENST00000519115 DSG1Q02413 1049 aa8.17□□□□□ -1.1
SDCBP-206ENST00000519115 ELAVL2Q12926 359 aaKnown RBP8.17□□□□□ -1.1
SDCBP-206ENST00000519115 ZBTB6Q15916 424 aa8.17□□□□□ -1.1
SDCBP-206ENST00000519115 PSMD5Q16401 504 aa8.17□□□□□ -1.1
SDCBP-206ENST00000519115 AAK1Q2M2I8 961 aa8.17□□□□□ -1.1
SDCBP-206ENST00000519115 CCDC40Q4G0X9 1142 aa8.17□□□□□ -1.1
SDCBP-206ENST00000519115 TJAP1Q5JTD0 557 aa8.17□□□□□ -1.1
SDCBP-206ENST00000519115 KIAA0319Q5VV43 1072 aa8.17□□□□□ -1.1
SDCBP-206ENST00000519115 LMBRD2Q68DH5 695 aaPredicted RBP8.17□□□□□ -1.1
SDCBP-206ENST00000519115 DCLRE1AQ6PJP8 1040 aa8.17□□□□□ -1.1
SDCBP-206ENST00000519115 CCDC186Q7Z3E2 898 aa8.17□□□□□ -1.1
SDCBP-206ENST00000519115 PPFIBP1Q86W92 1011 aa8.17□□□□□ -1.1
SDCBP-206ENST00000519115 CBWD2Q8IUF1 395 aa8.17□□□□□ -1.1
SDCBP-206ENST00000519115 BRSK2Q8IWQ3 736 aa8.17□□□□□ -1.1
SDCBP-206ENST00000519115 LRRC8AQ8IWT6 810 aa8.17□□□□□ -1.1
SDCBP-206ENST00000519115 FAM186BQ8IYM0 893 aa8.17□□□□□ -1.1
SDCBP-206ENST00000519115 GPD1LQ8N335 351 aa8.17□□□□□ -1.1
SDCBP-206ENST00000519115 BEST2Q8NFU1 509 aa8.17□□□□□ -1.1
SDCBP-206ENST00000519115 DDX27Q96GQ7 796 aaKnown RBP8.17□□□□□ -1.1
SDCBP-206ENST00000519115 NECAB3Q96P71 396 aaPredicted RBP8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms