RNA–Protein interactions for RNA: ENST00000518839.1

TRAPPC9-205, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-205ENST00000518839 NSFP46459 744 aaKnown RBP16.06■□□□□ 0.16
TRAPPC9-205ENST00000518839 TAF6P49848 677 aa16.06■□□□□ 0.16
TRAPPC9-205ENST00000518839 CENPCQ03188 943 aa16.06■□□□□ 0.16
TRAPPC9-205ENST00000518839 MTFR1Q15390 333 aa16.06■□□□□ 0.16
TRAPPC9-205ENST00000518839 WHAMMP3Q1A5X7 153 aa16.06■□□□□ 0.16
TRAPPC9-205ENST00000518839 SV2CQ496J9 727 aa16.06■□□□□ 0.16
TRAPPC9-205ENST00000518839 GLRA4Q5JXX5 417 aa16.06■□□□□ 0.16
TRAPPC9-205ENST00000518839 CTU1Q7Z7A3 348 aaKnown RBP16.06■□□□□ 0.16
TRAPPC9-205ENST00000518839 FAM126BQ8IXS8 530 aa16.06■□□□□ 0.16
TRAPPC9-205ENST00000518839 ZNF606Q8WXB4 792 aa16.06■□□□□ 0.16
TRAPPC9-205ENST00000518839 C18orf25Q96B23 403 aaPredicted RBP16.06■□□□□ 0.16
TRAPPC9-205ENST00000518839 VCPIP1Q96JH7 1222 aa16.06■□□□□ 0.16
TRAPPC9-205ENST00000518839 PPP1R10Q96QC0 940 aaKnown RBP16.06■□□□□ 0.16
TRAPPC9-205ENST00000518839 FTHL17Q9BXU8 183 aa16.06■□□□□ 0.16
TRAPPC9-205ENST00000518839 SALL4Q9UJQ4 1053 aa16.06■□□□□ 0.16
TRAPPC9-205ENST00000518839 GTF3C4Q9UKN8 822 aa16.06■□□□□ 0.16
TRAPPC9-205ENST00000518839 BARX2Q9UMQ3 279 aaPredicted RBP16.06■□□□□ 0.16
TRAPPC9-205ENST00000518839 SAR1BQ9Y6B6 198 aa16.06■□□□□ 0.16
TRAPPC9-205ENST00000518839 PALMO75781 387 aa16.05■□□□□ 0.16
TRAPPC9-205ENST00000518839 MTA2O94776 668 aa16.05■□□□□ 0.16
TRAPPC9-205ENST00000518839 THP07101 528 aa16.05■□□□□ 0.16
TRAPPC9-205ENST00000518839 FAM163BP0C2L3 166 aa16.05■□□□□ 0.16
TRAPPC9-205ENST00000518839 TCP1P17987 556 aaKnown RBP16.05■□□□□ 0.16
TRAPPC9-205ENST00000518839 PAX3P23760 479 aa16.05■□□□□ 0.16
TRAPPC9-205ENST00000518839 AMPD2Q01433 879 aa16.05■□□□□ 0.16
TRAPPC9-205ENST00000518839 STILQ15468 1287 aa16.05■□□□□ 0.16
TRAPPC9-205ENST00000518839 PKN2Q16513 984 aaKnown RBP16.05■□□□□ 0.16
TRAPPC9-205ENST00000518839 FBXO46Q6PJ61 603 aaPredicted RBP16.05■□□□□ 0.16
TRAPPC9-205ENST00000518839 TRAF7Q6Q0C0 670 aa16.05■□□□□ 0.16
TRAPPC9-205ENST00000518839 LRRC8DQ7L1W4 858 aa16.05■□□□□ 0.16
TRAPPC9-205ENST00000518839 CEP112Q8N8E3 955 aa16.05■□□□□ 0.16
TRAPPC9-205ENST00000518839 TMEM35BQ8NCS4 154 aa16.05■□□□□ 0.16
TRAPPC9-205ENST00000518839 TPCN2Q8NHX9 752 aa16.05■□□□□ 0.16
TRAPPC9-205ENST00000518839 SLC35G2Q8TBE7 412 aa16.05■□□□□ 0.16
TRAPPC9-205ENST00000518839 TMEM176AQ96HP8 235 aa16.05■□□□□ 0.16
TRAPPC9-205ENST00000518839 MMS19Q96T76 1030 aa16.05■□□□□ 0.16
TRAPPC9-205ENST00000518839 ADAM2Q99965 735 aa16.05■□□□□ 0.16
TRAPPC9-205ENST00000518839 THAP2Q9H0W7 228 aa16.05■□□□□ 0.16
TRAPPC9-205ENST00000518839 SMYD3Q9H7B4 428 aa16.05■□□□□ 0.16
TRAPPC9-205ENST00000518839 AVENQ9NQS1 362 aaPredicted RBP16.05■□□□□ 0.16
TRAPPC9-205ENST00000518839 GDAP2Q9NXN4 497 aa16.05■□□□□ 0.16
TRAPPC9-205ENST00000518839 UVRAGQ9P2Y5 699 aa16.05■□□□□ 0.16
TRAPPC9-205ENST00000518839 HYOU1Q9Y4L1 999 aa16.05■□□□□ 0.16
TRAPPC9-205ENST00000518839 TANC1Q9C0D5 1861 aa16.04■□□□□ 0.16
TRAPPC9-205ENST00000518839 UQCRHLA0A096LP55 91 aa16.04■□□□□ 0.16
TRAPPC9-205ENST00000518839 GRID2IPA4D2P6 1211 aa16.04■□□□□ 0.16
TRAPPC9-205ENST00000518839 PITPNM1O00562 1244 aa16.04■□□□□ 0.16
TRAPPC9-205ENST00000518839 PTGESO14684 152 aa16.04■□□□□ 0.16
TRAPPC9-205ENST00000518839 PARNO95453 639 aaKnown RBP16.04■□□□□ 0.16
TRAPPC9-205ENST00000518839 ATP1A1P05023 1023 aaKnown RBP16.04■□□□□ 0.16
TRAPPC9-205ENST00000518839 CYP1A2P05177 515 aa16.04■□□□□ 0.16
TRAPPC9-205ENST00000518839 UQCRHP07919 91 aa16.04■□□□□ 0.16
TRAPPC9-205ENST00000518839 VDRP11473 427 aa16.04■□□□□ 0.16
TRAPPC9-205ENST00000518839 CAPN2P17655 700 aa16.04■□□□□ 0.16
TRAPPC9-205ENST00000518839 RAP1GAPP47736 663 aa16.04■□□□□ 0.16
TRAPPC9-205ENST00000518839 RAD23BP54727 409 aa16.04■□□□□ 0.16
TRAPPC9-205ENST00000518839 TUBB4BP68371 445 aa16.04■□□□□ 0.16
TRAPPC9-205ENST00000518839 NOMO3P69849 1222 aa16.04■□□□□ 0.16
TRAPPC9-205ENST00000518839 LIN9Q5TKA1 542 aa16.04■□□□□ 0.16
TRAPPC9-205ENST00000518839 DPH6Q7L8W6 267 aa16.04■□□□□ 0.16
TRAPPC9-205ENST00000518839 UNC93AQ86WB7 457 aa16.04■□□□□ 0.16
TRAPPC9-205ENST00000518839 PHF13Q86YI8 300 aaPredicted RBP16.04■□□□□ 0.16
TRAPPC9-205ENST00000518839 MNS1Q8NEH6 495 aa16.04■□□□□ 0.16
TRAPPC9-205ENST00000518839 ZNF653Q96CK0 615 aa16.04■□□□□ 0.16
TRAPPC9-205ENST00000518839 NT5C1AQ9BXI3 368 aa16.04■□□□□ 0.16
TRAPPC9-205ENST00000518839 CRISPLD2Q9H0B8 497 aa16.04■□□□□ 0.16
TRAPPC9-205ENST00000518839 SDCBP2Q9H190 292 aa16.04■□□□□ 0.16
TRAPPC9-205ENST00000518839 CXCL16Q9H2A7 254 aa16.04■□□□□ 0.16
TRAPPC9-205ENST00000518839 RSAD1Q9HA92 442 aa16.04■□□□□ 0.16
TRAPPC9-205ENST00000518839 RGS18Q9NS28 235 aa16.04■□□□□ 0.16
TRAPPC9-205ENST00000518839 CTTNBP2NLQ9P2B4 639 aa16.04■□□□□ 0.16
TRAPPC9-205ENST00000518839 SNX9Q9Y5X1 595 aa16.04■□□□□ 0.16
TRAPPC9-205ENST00000518839 KPNA7A9QM74 516 aa16.03■□□□□ 0.16
TRAPPC9-205ENST00000518839 ENC1O14682 589 aa16.03■□□□□ 0.16
TRAPPC9-205ENST00000518839 MGEA5O60502 916 aa16.03■□□□□ 0.16
TRAPPC9-205ENST00000518839 EOMESO95936 686 aa16.03■□□□□ 0.16
TRAPPC9-205ENST00000518839 CD19P15391 556 aa16.03■□□□□ 0.16
TRAPPC9-205ENST00000518839 RPL9P32969 192 aaKnown RBP16.03■□□□□ 0.16
TRAPPC9-205ENST00000518839 CDH5P33151 784 aaPredicted RBP16.03■□□□□ 0.16
TRAPPC9-205ENST00000518839 MLH1P40692 756 aa16.03■□□□□ 0.16
TRAPPC9-205ENST00000518839 CDH8P55286 799 aa16.03■□□□□ 0.16
TRAPPC9-205ENST00000518839 C1QBPQ07021 282 aaKnown RBP16.03■□□□□ 0.16
TRAPPC9-205ENST00000518839 CKAP4Q07065 602 aaKnown RBP16.03■□□□□ 0.16
TRAPPC9-205ENST00000518839 ZNF394Q53GI3 561 aa16.03■□□□□ 0.16
TRAPPC9-205ENST00000518839 NAA35Q5VZE5 725 aa16.03■□□□□ 0.16
TRAPPC9-205ENST00000518839 AGMOQ6ZNB7 445 aa16.03■□□□□ 0.16
TRAPPC9-205ENST00000518839 SLFN11Q7Z7L1 901 aa16.03■□□□□ 0.16
TRAPPC9-205ENST00000518839 ECHDC2Q86YB7 292 aa16.03■□□□□ 0.16
TRAPPC9-205ENST00000518839 MCOLN2Q8IZK6 566 aa16.03■□□□□ 0.16
TRAPPC9-205ENST00000518839 SLC4A11Q8NBS3 891 aa16.03■□□□□ 0.16
TRAPPC9-205ENST00000518839 MSANTD4Q8NCY6 345 aa16.03■□□□□ 0.16
TRAPPC9-205ENST00000518839 ARHGEF26Q96DR7 871 aa16.03■□□□□ 0.16
TRAPPC9-205ENST00000518839 CYFIP2Q96F07 1278 aa16.03■□□□□ 0.16
TRAPPC9-205ENST00000518839 GAD1Q99259 594 aa16.03■□□□□ 0.16
TRAPPC9-205ENST00000518839 LHX5Q9H2C1 402 aa16.03■□□□□ 0.16
TRAPPC9-205ENST00000518839 CNOT8Q9UFF9 292 aaKnown RBP16.03■□□□□ 0.16
TRAPPC9-205ENST00000518839 SNX12Q9UMY4 172 aa16.03■□□□□ 0.16
TRAPPC9-205ENST00000518839 INPPL1O15357 1258 aa16.02■□□□□ 0.16
TRAPPC9-205ENST00000518839 CALB1P05937 261 aa16.02■□□□□ 0.16
TRAPPC9-205ENST00000518839 COL6A1P12109 1028 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms