RNA–Protein interactions for RNA: ENST00000518716.1

PABPC1-207, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 694 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-207ENST00000518716 CA14Q9ULX7 337 aa6.77□□□□□ -1.33
PABPC1-207ENST00000518716 PCDHGA2Q9Y5H1 932 aa6.77□□□□□ -1.33
PABPC1-207ENST00000518716 SDK1Q7Z5N4 2213 aa6.77□□□□□ -1.33
PABPC1-207ENST00000518716 CLUHO75153 1309 aa6.76□□□□□ -1.33
PABPC1-207ENST00000518716 MTCL1Q9Y4B5 1905 aaKnown RBP6.76□□□□□ -1.33
PABPC1-207ENST00000518716 LOC100289279A0A1B0GTE1 492 aa6.76□□□□□ -1.33
PABPC1-207ENST00000518716 CCDC195A0A1B0GUA6 201 aa6.76□□□□□ -1.33
PABPC1-207ENST00000518716 IPO5O00410 1097 aaKnown RBP6.76□□□□□ -1.33
PABPC1-207ENST00000518716 SH2B2O14492 632 aaPredicted RBP6.76□□□□□ -1.33
PABPC1-207ENST00000518716 INPPL1O15357 1258 aa6.76□□□□□ -1.33
PABPC1-207ENST00000518716 TEX28O15482 410 aa6.76□□□□□ -1.33
PABPC1-207ENST00000518716 KINO60870 393 aaKnown RBP6.76□□□□□ -1.33
PABPC1-207ENST00000518716 ZC3H11AO75152 810 aaKnown RBP eCLIP6.76□□□□□ -1.33
PABPC1-207ENST00000518716 CSDE1O75534 798 aaKnown RBP6.76□□□□□ -1.33
PABPC1-207ENST00000518716 RFPL2O75678 378 aa6.76□□□□□ -1.33
PABPC1-207ENST00000518716 DDHD2O94830 711 aa6.76□□□□□ -1.33
PABPC1-207ENST00000518716 TDGF1P13385 188 aa6.76□□□□□ -1.33
PABPC1-207ENST00000518716 KLRC2P26717 231 aa6.76□□□□□ -1.33
PABPC1-207ENST00000518716 LIFRP42702 1097 aa6.76□□□□□ -1.33
PABPC1-207ENST00000518716 C19orf57Q0VDD7 668 aa6.76□□□□□ -1.33
PABPC1-207ENST00000518716 DRP2Q13474 957 aa6.76□□□□□ -1.33
PABPC1-207ENST00000518716 NONOQ15233 471 aaKnown RBP eCLIP6.76□□□□□ -1.33
PABPC1-207ENST00000518716 ST3GAL2Q16842 350 aa6.76□□□□□ -1.33
PABPC1-207ENST00000518716 SPECC1Q5M775 1068 aa6.76□□□□□ -1.33
PABPC1-207ENST00000518716 DCLRE1AQ6PJP8 1040 aa6.76□□□□□ -1.33
PABPC1-207ENST00000518716 AGMOQ6ZNB7 445 aa6.76□□□□□ -1.33
PABPC1-207ENST00000518716 TAS1R1Q7RTX1 841 aa6.76□□□□□ -1.33
PABPC1-207ENST00000518716 SMAP1Q8IYB5 467 aaPredicted RBP6.76□□□□□ -1.33
PABPC1-207ENST00000518716 EXOC8Q8IYI6 725 aa6.76□□□□□ -1.33
PABPC1-207ENST00000518716 TMTC2Q8N394 836 aa6.76□□□□□ -1.33
PABPC1-207ENST00000518716 LRRC71Q8N4P6 559 aa6.76□□□□□ -1.33
PABPC1-207ENST00000518716 GPATCH11Q8N954 259 aa6.76□□□□□ -1.33
PABPC1-207ENST00000518716 RNF169Q8NCN4 708 aa6.76□□□□□ -1.33
PABPC1-207ENST00000518716 HDAC7Q8WUI4 952 aa6.76□□□□□ -1.33
PABPC1-207ENST00000518716 MAP4K1Q92918 833 aa6.76□□□□□ -1.33
PABPC1-207ENST00000518716 LPPQ93052 612 aa6.76□□□□□ -1.33
PABPC1-207ENST00000518716 LENG9Q96B70 501 aa6.76□□□□□ -1.33
PABPC1-207ENST00000518716 PGBD1Q96JS3 809 aa6.76□□□□□ -1.33
PABPC1-207ENST00000518716 HHIPQ96QV1 700 aa6.76□□□□□ -1.33
PABPC1-207ENST00000518716 RPS6KC1Q96S38 1066 aa6.76□□□□□ -1.33
PABPC1-207ENST00000518716 RTKNQ9BST9 563 aa6.76□□□□□ -1.33
PABPC1-207ENST00000518716 EMILIN2Q9BXX0 1053 aa6.76□□□□□ -1.33
PABPC1-207ENST00000518716 ANO3Q9BYT9 981 aa6.76□□□□□ -1.33
PABPC1-207ENST00000518716 SAP130Q9H0E3 1048 aa6.76□□□□□ -1.33
PABPC1-207ENST00000518716 NT5C3AQ9H0P0 336 aa6.76□□□□□ -1.33
PABPC1-207ENST00000518716 PARD6AQ9NPB6 346 aa6.76□□□□□ -1.33
PABPC1-207ENST00000518716 MAN1C1Q9NR34 630 aa6.76□□□□□ -1.33
PABPC1-207ENST00000518716 CHST7Q9NS84 486 aa6.76□□□□□ -1.33
PABPC1-207ENST00000518716 MARCH5Q9NX47 278 aa6.76□□□□□ -1.33
PABPC1-207ENST00000518716 ABI2Q9NYB9 513 aaPredicted RBP6.76□□□□□ -1.33
PABPC1-207ENST00000518716 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.76□□□□□ -1.33
PABPC1-207ENST00000518716 STK39Q9UEW8 545 aa6.76□□□□□ -1.33
PABPC1-207ENST00000518716 CEP131Q9UPN4 1083 aa6.76□□□□□ -1.33
PABPC1-207ENST00000518716 MTF2Q9Y483 593 aaPredicted RBP6.76□□□□□ -1.33
PABPC1-207ENST00000518716 PCDHA10Q9Y5I2 948 aa6.76□□□□□ -1.33
PABPC1-207ENST00000518716 IGF2RP11717 2491 aa6.76□□□□□ -1.33
PABPC1-207ENST00000518716 COL4A3Q01955 1670 aa6.75□□□□□ -1.33
PABPC1-207ENST00000518716 KANSL1LA0AUZ9 987 aa6.75□□□□□ -1.33
PABPC1-207ENST00000518716 DDX39AO00148 427 aaKnown RBP6.75□□□□□ -1.33
PABPC1-207ENST00000518716 ADAMTS3O15072 1205 aa6.75□□□□□ -1.33
PABPC1-207ENST00000518716 IGHDP01880 384 aa6.75□□□□□ -1.33
PABPC1-207ENST00000518716 SOD2P04179 222 aa6.75□□□□□ -1.33
PABPC1-207ENST00000518716 RXRAP19793 462 aa6.75□□□□□ -1.33
PABPC1-207ENST00000518716 CFPP27918 469 aa6.75□□□□□ -1.33
PABPC1-207ENST00000518716 GPC5P78333 572 aa6.75□□□□□ -1.33
PABPC1-207ENST00000518716 LMNB2Q03252 620 aa6.75□□□□□ -1.33
PABPC1-207ENST00000518716 AP3B2Q13367 1082 aa6.75□□□□□ -1.33
PABPC1-207ENST00000518716 UBXN11Q5T124 520 aa6.75□□□□□ -1.33
PABPC1-207ENST00000518716 GLB1LQ6UWU2 654 aa6.75□□□□□ -1.33
PABPC1-207ENST00000518716 B3GNT9Q6UX72 402 aa6.75□□□□□ -1.33
PABPC1-207ENST00000518716 HEATR3Q7Z4Q2 680 aa6.75□□□□□ -1.33
PABPC1-207ENST00000518716 SGMS1Q86VZ5 419 aa6.75□□□□□ -1.33
PABPC1-207ENST00000518716 PLA2G4DQ86XP0 818 aa6.75□□□□□ -1.33
PABPC1-207ENST00000518716 GPR65Q8IYL9 337 aa6.75□□□□□ -1.33
PABPC1-207ENST00000518716 FANCBQ8NB91 859 aa6.75□□□□□ -1.33
PABPC1-207ENST00000518716 PIK3R5Q8WYR1 880 aa6.75□□□□□ -1.33
PABPC1-207ENST00000518716 STAMQ92783 540 aa6.75□□□□□ -1.33
PABPC1-207ENST00000518716 ZNF668Q96K58 619 aaPredicted RBP6.75□□□□□ -1.33
PABPC1-207ENST00000518716 FAM167AQ96KS9 214 aa6.75□□□□□ -1.33
PABPC1-207ENST00000518716 MAP7D2Q96T17 732 aa6.75□□□□□ -1.33
PABPC1-207ENST00000518716 TMEM175Q9BSA9 504 aa6.75□□□□□ -1.33
PABPC1-207ENST00000518716 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.75□□□□□ -1.33
PABPC1-207ENST00000518716 PRMT8Q9NR22 394 aaPredicted RBP6.75□□□□□ -1.33
PABPC1-207ENST00000518716 MRPL17Q9NRX2 175 aaKnown RBP6.75□□□□□ -1.33
PABPC1-207ENST00000518716 TBC1D22BQ9NU19 505 aa6.75□□□□□ -1.33
PABPC1-207ENST00000518716 FAM105AQ9NUU6 356 aa6.75□□□□□ -1.33
PABPC1-207ENST00000518716 ZSCAN32Q9NX65 697 aa6.75□□□□□ -1.33
PABPC1-207ENST00000518716 GABBR1Q9UBS5 961 aa6.75□□□□□ -1.33
PABPC1-207ENST00000518716 ADAMTS6Q9UKP5 1117 aa6.75□□□□□ -1.33
PABPC1-207ENST00000518716 SOX13Q9UN79 622 aa6.75□□□□□ -1.33
PABPC1-207ENST00000518716 AKT3Q9Y243 479 aa6.75□□□□□ -1.33
PABPC1-207ENST00000518716 NUMBLQ9Y6R0 609 aa6.75□□□□□ -1.33
PABPC1-207ENST00000518716 NOTCH4Q99466 2003 aa6.75□□□□□ -1.33
PABPC1-207ENST00000518716 PATJQ8NI35 1801 aa6.75□□□□□ -1.33
PABPC1-207ENST00000518716 MIA3Q5JRA6 1907 aa6.74□□□□□ -1.33
PABPC1-207ENST00000518716 NRP1O14786 923 aa6.74□□□□□ -1.33
PABPC1-207ENST00000518716 SLC30A4O14863 429 aa6.74□□□□□ -1.33
PABPC1-207ENST00000518716 SGSM2O43147 1006 aa6.74□□□□□ -1.33
PABPC1-207ENST00000518716 PRC1O43663 620 aa6.74□□□□□ -1.33
PABPC1-207ENST00000518716 TBC1D4O60343 1298 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms