RNA–Protein interactions for RNA: ENST00000518542.1

CSGALNACT1-206, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 3

Gene CSGALNACT1, Length 895 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-206ENST00000518542 TCF20Q9UGU0 1960 aaKnown RBP8.28□□□□□ -1.08
CSGALNACT1-206ENST00000518542 CHD7Q9P2D1 2997 aa8.27□□□□□ -1.09
CSGALNACT1-206ENST00000518542 RCCD1A6NED2 376 aa8.27□□□□□ -1.09
CSGALNACT1-206ENST00000518542 SMTNL1A8MU46 457 aa8.27□□□□□ -1.09
CSGALNACT1-206ENST00000518542 BECN2A8MW95 431 aa8.27□□□□□ -1.09
CSGALNACT1-206ENST00000518542 KPNA7A9QM74 516 aa8.27□□□□□ -1.09
CSGALNACT1-206ENST00000518542 F8W810 466 aa8.27□□□□□ -1.09
CSGALNACT1-206ENST00000518542 SYN3O14994 580 aa8.27□□□□□ -1.09
CSGALNACT1-206ENST00000518542 N4BP1O75113 896 aaKnown RBP8.27□□□□□ -1.09
CSGALNACT1-206ENST00000518542 CXCL14O95715 111 aa8.27□□□□□ -1.09
CSGALNACT1-206ENST00000518542 C4BPAP04003 597 aaKnown RBP8.27□□□□□ -1.09
CSGALNACT1-206ENST00000518542 URODP06132 367 aa8.27□□□□□ -1.09
CSGALNACT1-206ENST00000518542 TPM2P07951 284 aa8.27□□□□□ -1.09
CSGALNACT1-206ENST00000518542 TRIM49P0CI25 452 aa8.27□□□□□ -1.09
CSGALNACT1-206ENST00000518542 TRIM49CP0CI26 452 aa8.27□□□□□ -1.09
CSGALNACT1-206ENST00000518542 CTSAP10619 480 aa8.27□□□□□ -1.09
CSGALNACT1-206ENST00000518542 IGFBP4P22692 258 aa8.27□□□□□ -1.09
CSGALNACT1-206ENST00000518542 CA8P35219 290 aa8.27□□□□□ -1.09
CSGALNACT1-206ENST00000518542 MTIF2P46199 727 aaKnown RBP8.27□□□□□ -1.09
CSGALNACT1-206ENST00000518542 BRCC3P46736 316 aa8.27□□□□□ -1.09
CSGALNACT1-206ENST00000518542 GCLMP48507 274 aa8.27□□□□□ -1.09
CSGALNACT1-206ENST00000518542 GLUD2P49448 558 aa8.27□□□□□ -1.09
CSGALNACT1-206ENST00000518542 ZNF165P49910 485 aa8.27□□□□□ -1.09
CSGALNACT1-206ENST00000518542 MARSP56192 900 aaKnown RBP8.27□□□□□ -1.09
CSGALNACT1-206ENST00000518542 LILRA4P59901 499 aa8.27□□□□□ -1.09
CSGALNACT1-206ENST00000518542 MCCD1P59942 119 aaPredicted RBP8.27□□□□□ -1.09
CSGALNACT1-206ENST00000518542 MYL5Q02045 173 aa8.27□□□□□ -1.09
CSGALNACT1-206ENST00000518542 CREMQ03060 361 aa8.27□□□□□ -1.09
CSGALNACT1-206ENST00000518542 CCDC173Q0VFZ6 552 aa8.27□□□□□ -1.09
CSGALNACT1-206ENST00000518542 CETN1Q12798 172 aa8.27□□□□□ -1.09
CSGALNACT1-206ENST00000518542 SMC1AQ14683 1233 aaKnown RBP8.27□□□□□ -1.09
CSGALNACT1-206ENST00000518542 TIGD5Q53EQ6 642 aa8.27□□□□□ -1.09
CSGALNACT1-206ENST00000518542 FAM171A1Q5VUB5 890 aa8.27□□□□□ -1.09
CSGALNACT1-206ENST00000518542 KRT39Q6A163 491 aa8.27□□□□□ -1.09
CSGALNACT1-206ENST00000518542 PDXDC1Q6P996 788 aa8.27□□□□□ -1.09
CSGALNACT1-206ENST00000518542 DSTYKQ6XUX3 929 aa8.27□□□□□ -1.09
CSGALNACT1-206ENST00000518542 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.27□□□□□ -1.09
CSGALNACT1-206ENST00000518542 LAPTM4BQ86VI4 370 aa8.27□□□□□ -1.09
CSGALNACT1-206ENST00000518542 CEP57Q86XR8 500 aa8.27□□□□□ -1.09
CSGALNACT1-206ENST00000518542 CCDC150Q8NCX0 1101 aa8.27□□□□□ -1.09
CSGALNACT1-206ENST00000518542 C3orf58Q8NDZ4 430 aa8.27□□□□□ -1.09
CSGALNACT1-206ENST00000518542 APPL2Q8NEU8 664 aa8.27□□□□□ -1.09
CSGALNACT1-206ENST00000518542 ANKRD20A12PQ8NF67 263 aa8.27□□□□□ -1.09
CSGALNACT1-206ENST00000518542 PLEKHO2Q8TD55 490 aa8.27□□□□□ -1.09
CSGALNACT1-206ENST00000518542 BCL7CQ8WUZ0 217 aaPredicted RBP8.27□□□□□ -1.09
CSGALNACT1-206ENST00000518542 ZNF516Q92618 1163 aa8.27□□□□□ -1.09
CSGALNACT1-206ENST00000518542 BORCS6Q96GS4 357 aa8.27□□□□□ -1.09
CSGALNACT1-206ENST00000518542 HPDLQ96IR7 371 aa8.27□□□□□ -1.09
CSGALNACT1-206ENST00000518542 SUSD3Q96L08 255 aa8.27□□□□□ -1.09
CSGALNACT1-206ENST00000518542 CNOT6LQ96LI5 555 aaKnown RBP8.27□□□□□ -1.09
CSGALNACT1-206ENST00000518542 MED15Q96RN5 788 aa8.27□□□□□ -1.09
CSGALNACT1-206ENST00000518542 TCF25Q9BQ70 676 aa8.27□□□□□ -1.09
CSGALNACT1-206ENST00000518542 BPIFA3Q9BQP9 254 aa8.27□□□□□ -1.09
CSGALNACT1-206ENST00000518542 TTPALQ9BTX7 342 aa8.27□□□□□ -1.09
CSGALNACT1-206ENST00000518542 HERC2P3Q9BVR0 1158 aa8.27□□□□□ -1.09
CSGALNACT1-206ENST00000518542 GPR62Q9BZJ7 368 aa8.27□□□□□ -1.09
CSGALNACT1-206ENST00000518542 IMPG2Q9BZV3 1241 aa8.27□□□□□ -1.09
CSGALNACT1-206ENST00000518542 MMRN2Q9H8L6 949 aa8.27□□□□□ -1.09
CSGALNACT1-206ENST00000518542 TMEM8AQ9HCN3 771 aa8.27□□□□□ -1.09
CSGALNACT1-206ENST00000518542 MRPL17Q9NRX2 175 aaKnown RBP8.27□□□□□ -1.09
CSGALNACT1-206ENST00000518542 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.27□□□□□ -1.09
CSGALNACT1-206ENST00000518542 VWA8A3KMH1 1905 aa8.27□□□□□ -1.09
CSGALNACT1-206ENST00000518542 PTPRJQ12913 1337 aa8.27□□□□□ -1.09
CSGALNACT1-206ENST00000518542 TRANK1O15050 2925 aa8.26□□□□□ -1.09
CSGALNACT1-206ENST00000518542 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.26□□□□□ -1.09
CSGALNACT1-206ENST00000518542 H7C4K7 107 aa8.26□□□□□ -1.09
CSGALNACT1-206ENST00000518542 M0QZQ0 153 aa8.26□□□□□ -1.09
CSGALNACT1-206ENST00000518542 PPEF2O14830 753 aa8.26□□□□□ -1.09
CSGALNACT1-206ENST00000518542 HUS1O60921 280 aa8.26□□□□□ -1.09
CSGALNACT1-206ENST00000518542 CSPG5O95196 566 aa8.26□□□□□ -1.09
CSGALNACT1-206ENST00000518542 EFEMP2O95967 443 aa8.26□□□□□ -1.09
CSGALNACT1-206ENST00000518542 ODC1P11926 461 aa8.26□□□□□ -1.09
CSGALNACT1-206ENST00000518542 P4HA1P13674 534 aa8.26□□□□□ -1.09
CSGALNACT1-206ENST00000518542 POU3F3P20264 500 aaPredicted RBP8.26□□□□□ -1.09
CSGALNACT1-206ENST00000518542 CDK11BP21127 795 aaKnown RBP8.26□□□□□ -1.09
CSGALNACT1-206ENST00000518542 DNAJB1P25685 340 aa8.26□□□□□ -1.09
CSGALNACT1-206ENST00000518542 ATICP31939 592 aa8.26□□□□□ -1.09
CSGALNACT1-206ENST00000518542 PIK3CAP42336 1068 aa8.26□□□□□ -1.09
CSGALNACT1-206ENST00000518542 MXI1P50539 228 aa8.26□□□□□ -1.09
CSGALNACT1-206ENST00000518542 ERVFC1P60507 584 aa8.26□□□□□ -1.09
CSGALNACT1-206ENST00000518542 TPM4P67936 248 aa8.26□□□□□ -1.09
CSGALNACT1-206ENST00000518542 DSG1Q02413 1049 aa8.26□□□□□ -1.09
CSGALNACT1-206ENST00000518542 PPP3CAQ08209 521 aa8.26□□□□□ -1.09
CSGALNACT1-206ENST00000518542 NCOA4Q13772 614 aa8.26□□□□□ -1.09
CSGALNACT1-206ENST00000518542 SGSM1Q2NKQ1 1148 aa8.26□□□□□ -1.09
CSGALNACT1-206ENST00000518542 ZACNQ401N2 412 aa8.26□□□□□ -1.09
CSGALNACT1-206ENST00000518542 C1orf220Q5T0J3 134 aa8.26□□□□□ -1.09
CSGALNACT1-206ENST00000518542 TDRD10Q5VZ19 366 aaKnown RBP8.26□□□□□ -1.09
CSGALNACT1-206ENST00000518542 PLPP4Q5VZY2 271 aa8.26□□□□□ -1.09
CSGALNACT1-206ENST00000518542 CD300LGQ6UXG3 332 aa8.26□□□□□ -1.09
CSGALNACT1-206ENST00000518542 ANKS3Q6ZW76 656 aa8.26□□□□□ -1.09
CSGALNACT1-206ENST00000518542 SV2AQ7L0J3 742 aa8.26□□□□□ -1.09
CSGALNACT1-206ENST00000518542 TAS1R1Q7RTX1 841 aa8.26□□□□□ -1.09
CSGALNACT1-206ENST00000518542 METTL23Q86XA0 190 aa8.26□□□□□ -1.09
CSGALNACT1-206ENST00000518542 TRIM59Q8IWR1 403 aa8.26□□□□□ -1.09
CSGALNACT1-206ENST00000518542 GPR65Q8IYL9 337 aa8.26□□□□□ -1.09
CSGALNACT1-206ENST00000518542 RNF168Q8IYW5 571 aaPredicted RBP8.26□□□□□ -1.09
CSGALNACT1-206ENST00000518542 TMEM130Q8N3G9 435 aa8.26□□□□□ -1.09
CSGALNACT1-206ENST00000518542 FBXL13Q8NEE6 735 aa8.26□□□□□ -1.09
CSGALNACT1-206ENST00000518542 RIN2Q8WYP3 895 aaPredicted RBP8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms