RNA–Protein interactions for RNA: ENST00000518371.2

MRPS28-203, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-203ENST00000518371 MKNK1Q9BUB5 465 aa6.68□□□□□ -1.34
MRPS28-203ENST00000518371 TARS2Q9BW92 718 aaKnown RBP6.68□□□□□ -1.34
MRPS28-203ENST00000518371 MRPL4Q9BYD3 311 aaKnown RBP6.68□□□□□ -1.34
MRPS28-203ENST00000518371 SCAND2PQ9GZW5 306 aaPredicted RBP6.68□□□□□ -1.34
MRPS28-203ENST00000518371 CCDC113Q9H0I3 377 aa6.68□□□□□ -1.34
MRPS28-203ENST00000518371 LMAN2LQ9H0V9 348 aa6.68□□□□□ -1.34
MRPS28-203ENST00000518371 SMG9Q9H0W8 520 aaKnown RBP6.68□□□□□ -1.34
MRPS28-203ENST00000518371 CUEDC2Q9H467 287 aa6.68□□□□□ -1.34
MRPS28-203ENST00000518371 NXF3Q9H4D5 531 aaKnown RBP6.68□□□□□ -1.34
MRPS28-203ENST00000518371 PDZD7Q9H5P4 517 aa6.68□□□□□ -1.34
MRPS28-203ENST00000518371 TBC1D13Q9NVG8 400 aa6.68□□□□□ -1.34
MRPS28-203ENST00000518371 SPG21Q9NZD8 308 aa6.68□□□□□ -1.34
MRPS28-203ENST00000518371 ARHGAP28Q9P2N2 729 aa6.68□□□□□ -1.34
MRPS28-203ENST00000518371 PLAGL2Q9UPG8 496 aa6.68□□□□□ -1.34
MRPS28-203ENST00000518371 TNFSF13BQ9Y275 285 aa6.68□□□□□ -1.34
MRPS28-203ENST00000518371 GDAQ9Y2T3 454 aa6.68□□□□□ -1.34
MRPS28-203ENST00000518371 GIT1Q9Y2X7 761 aa6.68□□□□□ -1.34
MRPS28-203ENST00000518371 WDR81Q562E7 1941 aa6.68□□□□□ -1.34
MRPS28-203ENST00000518371 MICAL3Q7RTP6 2002 aa6.67□□□□□ -1.34
MRPS28-203ENST00000518371 A0A087X0B3 334 aa6.67□□□□□ -1.34
MRPS28-203ENST00000518371 CARNS1A5YM72 827 aa6.67□□□□□ -1.34
MRPS28-203ENST00000518371 GOLGA6L4A6NEF3 574 aa6.67□□□□□ -1.34
MRPS28-203ENST00000518371 ARL5CA6NH57 179 aa6.67□□□□□ -1.34
MRPS28-203ENST00000518371 NT5C1B-RDH14C9J2C7 533 aa6.67□□□□□ -1.34
MRPS28-203ENST00000518371 POLR2DO15514 142 aaKnown RBP6.67□□□□□ -1.34
MRPS28-203ENST00000518371 MMP20O60882 483 aa6.67□□□□□ -1.34
MRPS28-203ENST00000518371 DEAF1O75398 565 aaPredicted RBP6.67□□□□□ -1.34
MRPS28-203ENST00000518371 FGF18O76093 207 aa6.67□□□□□ -1.34
MRPS28-203ENST00000518371 LINC00271P0C7V0 271 aa6.67□□□□□ -1.34
MRPS28-203ENST00000518371 HARSP12081 509 aaKnown RBP6.67□□□□□ -1.34
MRPS28-203ENST00000518371 GAP43P17677 238 aa6.67□□□□□ -1.34
MRPS28-203ENST00000518371 SCP2P22307 547 aa6.67□□□□□ -1.34
MRPS28-203ENST00000518371 CMA1P23946 247 aa6.67□□□□□ -1.34
MRPS28-203ENST00000518371 BRD2P25440 801 aaKnown RBP6.67□□□□□ -1.34
MRPS28-203ENST00000518371 NMT1P30419 496 aaKnown RBP6.67□□□□□ -1.34
MRPS28-203ENST00000518371 ABCD1P33897 745 aa6.67□□□□□ -1.34
MRPS28-203ENST00000518371 CA8P35219 290 aa6.67□□□□□ -1.34
MRPS28-203ENST00000518371 PPM1AP35813 382 aa6.67□□□□□ -1.34
MRPS28-203ENST00000518371 PBX3P40426 434 aa6.67□□□□□ -1.34
MRPS28-203ENST00000518371 MLH1P40692 756 aa6.67□□□□□ -1.34
MRPS28-203ENST00000518371 LIG4P49917 911 aa6.67□□□□□ -1.34
MRPS28-203ENST00000518371 SCNN1GP51170 649 aa6.67□□□□□ -1.34
MRPS28-203ENST00000518371 ZNF131P52739 623 aa6.67□□□□□ -1.34
MRPS28-203ENST00000518371 YARSP54577 528 aaKnown RBP6.67□□□□□ -1.34
MRPS28-203ENST00000518371 BCAR1P56945 870 aa6.67□□□□□ -1.34
MRPS28-203ENST00000518371 OSTNP61366 133 aa6.67□□□□□ -1.34
MRPS28-203ENST00000518371 BMS1Q14692 1282 aaKnown RBP6.67□□□□□ -1.34
MRPS28-203ENST00000518371 NAA30Q147X3 362 aaPredicted RBP6.67□□□□□ -1.34
MRPS28-203ENST00000518371 DCAF4L1Q3SXM0 396 aa6.67□□□□□ -1.34
MRPS28-203ENST00000518371 ZNF568Q3ZCX4 644 aa6.67□□□□□ -1.34
MRPS28-203ENST00000518371 RESP18Q5W5W9 173 aa6.67□□□□□ -1.34
MRPS28-203ENST00000518371 ADALQ6DHV7 355 aa6.67□□□□□ -1.34
MRPS28-203ENST00000518371 EP400NLQ6ZTU2 488 aa6.67□□□□□ -1.34
MRPS28-203ENST00000518371 SFR1Q86XK3 245 aa6.67□□□□□ -1.34
MRPS28-203ENST00000518371 ZNF280BQ86YH2 543 aa6.67□□□□□ -1.34
MRPS28-203ENST00000518371 CCDC65Q8IXS2 484 aa6.67□□□□□ -1.34
MRPS28-203ENST00000518371 CEP57L1Q8IYX8 460 aa6.67□□□□□ -1.34
MRPS28-203ENST00000518371 POF1BQ8WVV4 589 aa6.67□□□□□ -1.34
MRPS28-203ENST00000518371 MRPS27Q92552 414 aaKnown RBP6.67□□□□□ -1.34
MRPS28-203ENST00000518371 PPP2R3CQ969Q6 453 aa6.67□□□□□ -1.34
MRPS28-203ENST00000518371 TMEM169Q96HH4 297 aa6.67□□□□□ -1.34
MRPS28-203ENST00000518371 RPS6KC1Q96S38 1066 aa6.67□□□□□ -1.34
MRPS28-203ENST00000518371 PYM1Q9BRP8 204 aaKnown RBP6.67□□□□□ -1.34
MRPS28-203ENST00000518371 CCDC94Q9BW85 323 aaPredicted RBP6.67□□□□□ -1.34
MRPS28-203ENST00000518371 NRDE2Q9H7Z3 1164 aa6.67□□□□□ -1.34
MRPS28-203ENST00000518371 PANK4Q9NVE7 773 aa6.67□□□□□ -1.34
MRPS28-203ENST00000518371 MIOSQ9NXC5 875 aa6.67□□□□□ -1.34
MRPS28-203ENST00000518371 SNTG2Q9NY99 539 aa6.67□□□□□ -1.34
MRPS28-203ENST00000518371 TBC1D7Q9P0N9 293 aa6.67□□□□□ -1.34
MRPS28-203ENST00000518371 KCNH3Q9ULD8 1083 aa6.67□□□□□ -1.34
MRPS28-203ENST00000518371 TBX20Q9UMR3 447 aa6.67□□□□□ -1.34
MRPS28-203ENST00000518371 FAN1Q9Y2M0 1017 aa6.67□□□□□ -1.34
MRPS28-203ENST00000518371 RANBP2P49792 3224 aaKnown RBP6.67□□□□□ -1.34
MRPS28-203ENST00000518371 SIP14410 1827 aa6.66□□□□□ -1.34
MRPS28-203ENST00000518371 A0A1B0GVL5 298 aa6.66□□□□□ -1.34
MRPS28-203ENST00000518371 CLDN3O15551 220 aa6.66□□□□□ -1.34
MRPS28-203ENST00000518371 TOM1L1O75674 476 aa6.66□□□□□ -1.34
MRPS28-203ENST00000518371 DDHD2O94830 711 aa6.66□□□□□ -1.34
MRPS28-203ENST00000518371 EDN1P05305 212 aa6.66□□□□□ -1.34
MRPS28-203ENST00000518371 GALTP07902 379 aa6.66□□□□□ -1.34
MRPS28-203ENST00000518371 MCF2P10911 925 aa6.66□□□□□ -1.34
MRPS28-203ENST00000518371 AFMP43652 599 aa6.66□□□□□ -1.34
MRPS28-203ENST00000518371 OR1G1P47890 313 aa6.66□□□□□ -1.34
MRPS28-203ENST00000518371 SLC11A1P49279 550 aa6.66□□□□□ -1.34
MRPS28-203ENST00000518371 NCKAP1LP55160 1127 aa6.66□□□□□ -1.34
MRPS28-203ENST00000518371 ASIC1P78348 528 aa6.66□□□□□ -1.34
MRPS28-203ENST00000518371 PLCB3Q01970 1234 aa6.66□□□□□ -1.34
MRPS28-203ENST00000518371 UBE3AQ05086 875 aa6.66□□□□□ -1.34
MRPS28-203ENST00000518371 TIGD5Q53EQ6 642 aa6.66□□□□□ -1.34
MRPS28-203ENST00000518371 ZC2HC1CQ53FD0 456 aaPredicted RBP6.66□□□□□ -1.34
MRPS28-203ENST00000518371 TCEAL5Q5H9L2 206 aa6.66□□□□□ -1.34
MRPS28-203ENST00000518371 MPZL3Q6UWV2 235 aa6.66□□□□□ -1.34
MRPS28-203ENST00000518371 ZPBP2Q6X784 338 aa6.66□□□□□ -1.34
MRPS28-203ENST00000518371 ZNF720Q7Z2F6 126 aa6.66□□□□□ -1.34
MRPS28-203ENST00000518371 TMC7Q7Z402 723 aa6.66□□□□□ -1.34
MRPS28-203ENST00000518371 SLC39A11Q8N1S5 342 aa6.66□□□□□ -1.34
MRPS28-203ENST00000518371 DTWD1Q8N5C7 304 aa6.66□□□□□ -1.34
MRPS28-203ENST00000518371 TMEM87AQ8NBN3 555 aa6.66□□□□□ -1.34
MRPS28-203ENST00000518371 DNAJC19Q96DA6 116 aa6.66□□□□□ -1.34
MRPS28-203ENST00000518371 ZBTB45Q96K62 511 aaPredicted RBP6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms