RNA–Protein interactions for RNA: ENST00000518140.5

SLIT3-204, Transcript of slit guidance ligand 3, humanhuman

TSL 1 (best)

Gene SLIT3, Length 2,090 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT3-204ENST00000518140 VRTNQ9H8Y1 702 aa24.92■■□□□ 1.58
SLIT3-204ENST00000518140 ABCB6Q9NP58 842 aa24.92■■□□□ 1.58
SLIT3-204ENST00000518140 CNTN3Q9P232 1028 aa24.92■■□□□ 1.58
SLIT3-204ENST00000518140 HMGXB4Q9UGU5 601 aa24.92■■□□□ 1.58
SLIT3-204ENST00000518140 CYP1A2P05177 515 aa24.92■■□□□ 1.58
SLIT3-204ENST00000518140 TERF2Q15554 542 aa24.92■■□□□ 1.58
SLIT3-204ENST00000518140 ZNF771Q7L3S4 317 aaPredicted RBP24.92■■□□□ 1.58
SLIT3-204ENST00000518140 MCOLN2Q8IZK6 566 aa24.92■■□□□ 1.58
SLIT3-204ENST00000518140 WHAMMQ8TF30 809 aa24.92■■□□□ 1.58
SLIT3-204ENST00000518140 TWNKQ96RR1 684 aa24.92■■□□□ 1.58
SLIT3-204ENST00000518140 KIF4AO95239 1232 aa24.91■■□□□ 1.58
SLIT3-204ENST00000518140 PEX26Q7Z412 305 aa24.91■■□□□ 1.58
SLIT3-204ENST00000518140 RHOT2Q8IXI1 618 aa24.91■■□□□ 1.58
SLIT3-204ENST00000518140 BTBD6Q96KE9 485 aa24.91■■□□□ 1.58
SLIT3-204ENST00000518140 DERAQ9Y315 318 aa24.91■■□□□ 1.58
SLIT3-204ENST00000518140 PTCH2Q9Y6C5 1203 aa24.91■■□□□ 1.58
SLIT3-204ENST00000518140 SMIM28A0A1B0GU29 152 aa24.9■■□□□ 1.58
SLIT3-204ENST00000518140 MEIS3P2A8K0S8 358 aa24.9■■□□□ 1.58
SLIT3-204ENST00000518140 NOMO3P69849 1222 aa24.9■■□□□ 1.58
SLIT3-204ENST00000518140 TCEAL1Q15170 157 aa24.9■■□□□ 1.58
SLIT3-204ENST00000518140 RPS6KA1Q15418 735 aa24.9■■□□□ 1.58
SLIT3-204ENST00000518140 RPAINQ86UA6 219 aa24.9■■□□□ 1.58
SLIT3-204ENST00000518140 CAGE1Q8TC20 777 aa24.9■■□□□ 1.58
SLIT3-204ENST00000518140 NUP85Q9BW27 656 aa24.9■■□□□ 1.58
SLIT3-204ENST00000518140 GRK4P32298 578 aa24.9■■□□□ 1.58
SLIT3-204ENST00000518140 RAD23BP54727 409 aa24.9■■□□□ 1.58
SLIT3-204ENST00000518140 CENPCQ03188 943 aa24.9■■□□□ 1.58
SLIT3-204ENST00000518140 HMX1Q9NP08 348 aaPredicted RBP24.9■■□□□ 1.58
SLIT3-204ENST00000518140 CNOT8Q9UFF9 292 aaKnown RBP24.9■■□□□ 1.58
SLIT3-204ENST00000518140 GTF3C4Q9UKN8 822 aa24.9■■□□□ 1.58
SLIT3-204ENST00000518140 HADHBP55084 474 aaKnown RBP24.89■■□□□ 1.58
SLIT3-204ENST00000518140 CPNE8Q86YQ8 564 aa24.89■■□□□ 1.58
SLIT3-204ENST00000518140 ELOVL4Q9GZR5 314 aa24.89■■□□□ 1.58
SLIT3-204ENST00000518140 TMEM110-MUSTN1A8MSY1 372 aa24.89■■□□□ 1.57
SLIT3-204ENST00000518140 RRM1P23921 792 aa24.89■■□□□ 1.57
SLIT3-204ENST00000518140 XKR4Q5GH76 650 aa24.89■■□□□ 1.57
SLIT3-204ENST00000518140 SLAIN1Q8ND83 568 aa24.89■■□□□ 1.57
SLIT3-204ENST00000518140 SH3TC2Q8TF17 1288 aa24.89■■□□□ 1.57
SLIT3-204ENST00000518140 KCNK3O14649 394 aa24.88■■□□□ 1.57
SLIT3-204ENST00000518140 ZRANB2O95218 330 aaKnown RBP eCLIP24.88■■□□□ 1.57
SLIT3-204ENST00000518140 NSFP46459 744 aaKnown RBP24.88■■□□□ 1.57
SLIT3-204ENST00000518140 RNASE9P60153 205 aaKnown RBP24.88■■□□□ 1.57
SLIT3-204ENST00000518140 FAM193AP78312 1265 aa24.88■■□□□ 1.57
SLIT3-204ENST00000518140 SOX4Q06945 474 aaPredicted RBP24.88■■□□□ 1.57
SLIT3-204ENST00000518140 MON1BQ7L1V2 547 aa24.88■■□□□ 1.57
SLIT3-204ENST00000518140 SYCE1Q8N0S2 351 aa24.88■■□□□ 1.57
SLIT3-204ENST00000518140 WDTC1Q8N5D0 677 aa24.88■■□□□ 1.57
SLIT3-204ENST00000518140 GOLGA2P5Q9HBQ8 144 aa24.88■■□□□ 1.57
SLIT3-204ENST00000518140 TRIM17Q9Y577 477 aa24.88■■□□□ 1.57
SLIT3-204ENST00000518140 ALG6Q9Y672 507 aa24.88■■□□□ 1.57
SLIT3-204ENST00000518140 SCN1AP35498 2009 aa24.88■■□□□ 1.57
SLIT3-204ENST00000518140 CILPO75339 1184 aa24.87■■□□□ 1.57
SLIT3-204ENST00000518140 CD52P31358 61 aa24.87■■□□□ 1.57
SLIT3-204ENST00000518140 TRIM71Q2Q1W2 868 aaKnown RBP24.87■■□□□ 1.57
SLIT3-204ENST00000518140 C9orf57Q5W0N0 161 aa24.87■■□□□ 1.57
SLIT3-204ENST00000518140 TMCO3Q6UWJ1 677 aa24.87■■□□□ 1.57
SLIT3-204ENST00000518140 SLC4A11Q8NBS3 891 aa24.87■■□□□ 1.57
SLIT3-204ENST00000518140 BEST2Q8NFU1 509 aa24.87■■□□□ 1.57
SLIT3-204ENST00000518140 ZNF564Q8TBZ8 553 aaPredicted RBP24.87■■□□□ 1.57
SLIT3-204ENST00000518140 RABGGTAQ92696 567 aa24.87■■□□□ 1.57
SLIT3-204ENST00000518140 HES6Q96HZ4 224 aa24.87■■□□□ 1.57
SLIT3-204ENST00000518140 ZFP42Q96MM3 310 aa24.87■■□□□ 1.57
SLIT3-204ENST00000518140 C11orf70Q9BRQ4 267 aa24.87■■□□□ 1.57
SLIT3-204ENST00000518140 TRIM7Q9C029 511 aa24.87■■□□□ 1.57
SLIT3-204ENST00000518140 TRPV6Q9H1D0 765 aa24.87■■□□□ 1.57
SLIT3-204ENST00000518140 MTA2O94776 668 aa24.87■■□□□ 1.57
SLIT3-204ENST00000518140 STAU1O95793 577 aaKnown RBP24.87■■□□□ 1.57
SLIT3-204ENST00000518140 GHRP10912 638 aa24.87■■□□□ 1.57
SLIT3-204ENST00000518140 CKAP4Q07065 602 aaKnown RBP24.87■■□□□ 1.57
SLIT3-204ENST00000518140 C2orf54Q08AI8 447 aa24.87■■□□□ 1.57
SLIT3-204ENST00000518140 PTP4A2Q12974 167 aa24.87■■□□□ 1.57
SLIT3-204ENST00000518140 MESDQ14696 234 aa24.87■■□□□ 1.57
SLIT3-204ENST00000518140 TRIM72Q6ZMU5 477 aa24.87■■□□□ 1.57
SLIT3-204ENST00000518140 FAXDC2Q96IV6 333 aa24.87■■□□□ 1.57
SLIT3-204ENST00000518140 AMFRQ9UKV5 643 aa24.87■■□□□ 1.57
SLIT3-204ENST00000518140 CABYRO75952 493 aa24.86■■□□□ 1.57
SLIT3-204ENST00000518140 KCNE1P15382 129 aa24.86■■□□□ 1.57
SLIT3-204ENST00000518140 CD19P15391 556 aa24.86■■□□□ 1.57
SLIT3-204ENST00000518140 AFF1P51825 1210 aaKnown RBP24.86■■□□□ 1.57
SLIT3-204ENST00000518140 YWHAEP62258 255 aaKnown RBP24.86■■□□□ 1.57
SLIT3-204ENST00000518140 FBXO47Q5MNV8 452 aa24.86■■□□□ 1.57
SLIT3-204ENST00000518140 MMS22LQ6ZRQ5 1243 aa24.86■■□□□ 1.57
SLIT3-204ENST00000518140 GLT1D1Q96MS3 346 aa24.86■■□□□ 1.57
SLIT3-204ENST00000518140 CYP3A43Q9HB55 503 aa24.86■■□□□ 1.57
SLIT3-204ENST00000518140 PADI3Q9ULW8 664 aa24.86■■□□□ 1.57
SLIT3-204ENST00000518140 NOD1Q9Y239 953 aa24.86■■□□□ 1.57
SLIT3-204ENST00000518140 MYCP01106 439 aaPredicted RBP24.85■■□□□ 1.57
SLIT3-204ENST00000518140 RHOXF2BP0C7M4 288 aa24.85■■□□□ 1.57
SLIT3-204ENST00000518140 TNNC1P63316 161 aa24.85■■□□□ 1.57
SLIT3-204ENST00000518140 PTK7Q13308 1070 aa24.85■■□□□ 1.57
SLIT3-204ENST00000518140 DENND1BQ6P3S1 775 aa24.85■■□□□ 1.57
SLIT3-204ENST00000518140 C1orf131Q8NDD1 294 aaKnown RBP24.85■■□□□ 1.57
SLIT3-204ENST00000518140 LPPQ93052 612 aa24.85■■□□□ 1.57
SLIT3-204ENST00000518140 RHOXF2Q9BQY4 288 aa24.85■■□□□ 1.57
SLIT3-204ENST00000518140 ANKZF1Q9H8Y5 726 aa24.85■■□□□ 1.57
SLIT3-204ENST00000518140 FAM105AQ9NUU6 356 aa24.85■■□□□ 1.57
SLIT3-204ENST00000518140 SAGE1Q9NXZ1 904 aa24.85■■□□□ 1.57
SLIT3-204ENST00000518140 ADAM22Q9P0K1 906 aa24.85■■□□□ 1.57
SLIT3-204ENST00000518140 UBQLN1Q9UMX0 589 aaKnown RBP24.85■■□□□ 1.57
SLIT3-204ENST00000518140 SNX9Q9Y5X1 595 aa24.85■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms