RNA–Protein interactions for RNA: ENST00000517940.1

AP3B1-203, Transcript of adaptor related protein complex 3 subunit beta 1, humanhuman

TSL 2

Gene AP3B1, Length 974 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1-203ENST00000517940 PRSS55Q6UWB4 352 aaPredicted RBP12.71□□□□□ -0.37
AP3B1-203ENST00000517940 ADGRD2Q7Z7M1 963 aa12.71□□□□□ -0.37
AP3B1-203ENST00000517940 FAM114A1Q8IWE2 563 aa12.71□□□□□ -0.37
AP3B1-203ENST00000517940 VPS52Q8N1B4 723 aa12.71□□□□□ -0.37
AP3B1-203ENST00000517940 PDCL2Q8N4E4 241 aa12.71□□□□□ -0.37
AP3B1-203ENST00000517940 FBXL13Q8NEE6 735 aa12.71□□□□□ -0.37
AP3B1-203ENST00000517940 LNX1Q8TBB1 728 aaPredicted RBP12.71□□□□□ -0.37
AP3B1-203ENST00000517940 ZNF560Q96MR9 790 aa12.71□□□□□ -0.37
AP3B1-203ENST00000517940 TMEM209Q96SK2 561 aa12.71□□□□□ -0.37
AP3B1-203ENST00000517940 MRPL45Q9BRJ2 306 aaKnown RBP12.71□□□□□ -0.37
AP3B1-203ENST00000517940 CRACR2AQ9BSW2 395 aa12.71□□□□□ -0.37
AP3B1-203ENST00000517940 BCO2Q9BYV7 579 aa12.71□□□□□ -0.37
AP3B1-203ENST00000517940 VPS16Q9H269 839 aa12.71□□□□□ -0.37
AP3B1-203ENST00000517940 RAB20Q9NX57 234 aa12.71□□□□□ -0.37
AP3B1-203ENST00000517940 HMGXB4Q9UGU5 601 aa12.71□□□□□ -0.37
AP3B1-203ENST00000517940 PCDHB8Q9UN66 801 aa12.71□□□□□ -0.37
AP3B1-203ENST00000517940 SIK3Q9Y2K2 1263 aa12.71□□□□□ -0.37
AP3B1-203ENST00000517940 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.71□□□□□ -0.37
AP3B1-203ENST00000517940 A0A1B0GTH6 734 aa12.7□□□□□ -0.38
AP3B1-203ENST00000517940 GTPBP10A4D1E9 387 aaKnown RBP12.7□□□□□ -0.38
AP3B1-203ENST00000517940 GABRDO14764 452 aa12.7□□□□□ -0.38
AP3B1-203ENST00000517940 P4HA2O15460 535 aa12.7□□□□□ -0.38
AP3B1-203ENST00000517940 VNN2O95498 520 aa12.7□□□□□ -0.38
AP3B1-203ENST00000517940 PRKCSHP14314 528 aaPredicted RBP12.7□□□□□ -0.38
AP3B1-203ENST00000517940 PON1P27169 355 aa12.7□□□□□ -0.38
AP3B1-203ENST00000517940 ATICP31939 592 aa12.7□□□□□ -0.38
AP3B1-203ENST00000517940 PNPLA4P41247 253 aa12.7□□□□□ -0.38
AP3B1-203ENST00000517940 CDH8P55286 799 aa12.7□□□□□ -0.38
AP3B1-203ENST00000517940 UBE3AQ05086 875 aa12.7□□□□□ -0.38
AP3B1-203ENST00000517940 SV2CQ496J9 727 aa12.7□□□□□ -0.38
AP3B1-203ENST00000517940 VARS2Q5ST30 1063 aaKnown RBP12.7□□□□□ -0.38
AP3B1-203ENST00000517940 PHLDB3Q6NSJ2 640 aa12.7□□□□□ -0.38
AP3B1-203ENST00000517940 GPR153Q6NV75 609 aa12.7□□□□□ -0.38
AP3B1-203ENST00000517940 GJB7Q6PEY0 223 aa12.7□□□□□ -0.38
AP3B1-203ENST00000517940 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.7□□□□□ -0.38
AP3B1-203ENST00000517940 CREBRFQ8IUR6 639 aa12.7□□□□□ -0.38
AP3B1-203ENST00000517940 OR10T2Q8NGX3 314 aa12.7□□□□□ -0.38
AP3B1-203ENST00000517940 FEZF2Q8TBJ5 459 aa12.7□□□□□ -0.38
AP3B1-203ENST00000517940 PIK3R5Q8WYR1 880 aa12.7□□□□□ -0.38
AP3B1-203ENST00000517940 KREMEN1Q96MU8 473 aa12.7□□□□□ -0.38
AP3B1-203ENST00000517940 PKMYT1Q99640 499 aa12.7□□□□□ -0.38
AP3B1-203ENST00000517940 INTS2Q9H0H0 1204 aaKnown RBP12.7□□□□□ -0.38
AP3B1-203ENST00000517940 RTN4Q9NQC3 1192 aaKnown RBP12.7□□□□□ -0.38
AP3B1-203ENST00000517940 TLR9Q9NR96 1032 aa12.7□□□□□ -0.38
AP3B1-203ENST00000517940 GCNT4Q9P109 453 aa12.7□□□□□ -0.38
AP3B1-203ENST00000517940 SNX9Q9Y5X1 595 aa12.7□□□□□ -0.38
AP3B1-203ENST00000517940 MTCL1Q9Y4B5 1905 aaKnown RBP12.69□□□□□ -0.38
AP3B1-203ENST00000517940 C2orf71A6NGG8 1288 aa12.69□□□□□ -0.38
AP3B1-203ENST00000517940 CYB561D2O14569 222 aa12.69□□□□□ -0.38
AP3B1-203ENST00000517940 SYN3O14994 580 aa12.69□□□□□ -0.38
AP3B1-203ENST00000517940 STX10O60499 249 aa12.69□□□□□ -0.38
AP3B1-203ENST00000517940 PHACTR2O75167 634 aa12.69□□□□□ -0.38
AP3B1-203ENST00000517940 NOL4O94818 638 aa12.69□□□□□ -0.38
AP3B1-203ENST00000517940 OAZ2O95190 189 aa12.69□□□□□ -0.38
AP3B1-203ENST00000517940 RPL17P18621 184 aaKnown RBP12.69□□□□□ -0.38
AP3B1-203ENST00000517940 TYMPP19971 482 aa12.69□□□□□ -0.38
AP3B1-203ENST00000517940 GTF2F1P35269 517 aaKnown RBP eCLIP12.69□□□□□ -0.38
AP3B1-203ENST00000517940 PBX1P40424 430 aa12.69□□□□□ -0.38
AP3B1-203ENST00000517940 FANCCQ00597 558 aa12.69□□□□□ -0.38
AP3B1-203ENST00000517940 WDR72Q3MJ13 1102 aa12.69□□□□□ -0.38
AP3B1-203ENST00000517940 ZNF697Q5TEC3 545 aa12.69□□□□□ -0.38
AP3B1-203ENST00000517940 PLPP4Q5VZY2 271 aa12.69□□□□□ -0.38
AP3B1-203ENST00000517940 TRIM65Q6PJ69 517 aa12.69□□□□□ -0.38
AP3B1-203ENST00000517940 SCARA5Q6ZMJ2 495 aa12.69□□□□□ -0.38
AP3B1-203ENST00000517940 USP37Q86T82 979 aa12.69□□□□□ -0.38
AP3B1-203ENST00000517940 EHBP1Q8NDI1 1231 aa12.69□□□□□ -0.38
AP3B1-203ENST00000517940 WHAMMQ8TF30 809 aa12.69□□□□□ -0.38
AP3B1-203ENST00000517940 TWNKQ96RR1 684 aa12.69□□□□□ -0.38
AP3B1-203ENST00000517940 TCF25Q9BQ70 676 aa12.69□□□□□ -0.38
AP3B1-203ENST00000517940 CLSTN3Q9BQT9 956 aa12.69□□□□□ -0.38
AP3B1-203ENST00000517940 TTPALQ9BTX7 342 aa12.69□□□□□ -0.38
AP3B1-203ENST00000517940 NIF3L1Q9GZT8 377 aa12.69□□□□□ -0.38
AP3B1-203ENST00000517940 GANQ9H2C0 597 aa12.69□□□□□ -0.38
AP3B1-203ENST00000517940 RXFP1Q9HBX9 757 aa12.69□□□□□ -0.38
AP3B1-203ENST00000517940 MAGEC2Q9UBF1 373 aaPredicted RBP12.69□□□□□ -0.38
AP3B1-203ENST00000517940 MTRRQ9UBK8 725 aa12.69□□□□□ -0.38
AP3B1-203ENST00000517940 IRAK3Q9Y616 596 aa12.69□□□□□ -0.38
AP3B1-203ENST00000517940 MTCH2Q9Y6C9 303 aa12.69□□□□□ -0.38
AP3B1-203ENST00000517940 BECN2A8MW95 431 aa12.68□□□□□ -0.38
AP3B1-203ENST00000517940 C2CD2LO14523 706 aa12.68□□□□□ -0.38
AP3B1-203ENST00000517940 N4BP1O75113 896 aaKnown RBP12.68□□□□□ -0.38
AP3B1-203ENST00000517940 CNPP09543 421 aaKnown RBP12.68□□□□□ -0.38
AP3B1-203ENST00000517940 POU3F3P20264 500 aaPredicted RBP12.68□□□□□ -0.38
AP3B1-203ENST00000517940 ACO1P21399 889 aaKnown RBP12.68□□□□□ -0.38
AP3B1-203ENST00000517940 LMO2P25791 158 aa12.68□□□□□ -0.38
AP3B1-203ENST00000517940 GLUD2P49448 558 aa12.68□□□□□ -0.38
AP3B1-203ENST00000517940 RBM10P98175 930 aaKnown RBP12.68□□□□□ -0.38
AP3B1-203ENST00000517940 LRMPQ12912 555 aa12.68□□□□□ -0.38
AP3B1-203ENST00000517940 TRPC3Q13507 836 aa12.68□□□□□ -0.38
AP3B1-203ENST00000517940 SGSM1Q2NKQ1 1148 aa12.68□□□□□ -0.38
AP3B1-203ENST00000517940 USP41Q3LFD5 358 aa12.68□□□□□ -0.38
AP3B1-203ENST00000517940 TOP6BLQ8N6T0 577 aa12.68□□□□□ -0.38
AP3B1-203ENST00000517940 MRPL43Q8N983 215 aaKnown RBP12.68□□□□□ -0.38
AP3B1-203ENST00000517940 VN1R2Q8NFZ6 395 aa12.68□□□□□ -0.38
AP3B1-203ENST00000517940 MYLIPQ8WY64 445 aa12.68□□□□□ -0.38
AP3B1-203ENST00000517940 RIN2Q8WYP3 895 aaPredicted RBP12.68□□□□□ -0.38
AP3B1-203ENST00000517940 TAF4BQ92750 862 aa12.68□□□□□ -0.38
AP3B1-203ENST00000517940 MRPL38Q96DV4 380 aaKnown RBP12.68□□□□□ -0.38
AP3B1-203ENST00000517940 CDX2Q99626 313 aaPredicted RBP12.68□□□□□ -0.38
AP3B1-203ENST00000517940 LPIN3Q9BQK8 851 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms