RNA–Protein interactions for RNA: ENST00000517921.1

PABPC1-203, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 885 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-203ENST00000517921 NPAS4Q8IUM7 802 aa11.32□□□□□ -0.6
PABPC1-203ENST00000517921 RBBP8NLQ8NC74 664 aaPredicted RBP11.32□□□□□ -0.6
PABPC1-203ENST00000517921 URGCPQ8TCY9 931 aa11.32□□□□□ -0.6
PABPC1-203ENST00000517921 EPS8L1Q8TE68 723 aa11.32□□□□□ -0.6
PABPC1-203ENST00000517921 DEF6Q9H4E7 631 aa11.32□□□□□ -0.6
PABPC1-203ENST00000517921 CYP3A43Q9HB55 503 aa11.32□□□□□ -0.6
PABPC1-203ENST00000517921 CISHQ9NSE2 258 aa11.32□□□□□ -0.6
PABPC1-203ENST00000517921 SPTLC3Q9NUV7 552 aa11.32□□□□□ -0.6
PABPC1-203ENST00000517921 NOCTQ9UK39 431 aaKnown RBP11.32□□□□□ -0.6
PABPC1-203ENST00000517921 REXO2Q9Y3B8 237 aaKnown RBP11.32□□□□□ -0.6
PABPC1-203ENST00000517921 PCDHB7Q9Y5E2 793 aa11.32□□□□□ -0.6
PABPC1-203ENST00000517921 PCDHB4Q9Y5E5 795 aa11.32□□□□□ -0.6
PABPC1-203ENST00000517921 ADGRG1Q9Y653 693 aa11.32□□□□□ -0.6
PABPC1-203ENST00000517921 EPN1Q9Y6I3 576 aaPredicted RBP11.32□□□□□ -0.6
PABPC1-203ENST00000517921 ESPNB1AK53 854 aa11.31□□□□□ -0.6
PABPC1-203ENST00000517921 EIF3CLB5ME19 914 aaKnown RBP11.31□□□□□ -0.6
PABPC1-203ENST00000517921 ZNF263O14978 683 aa11.31□□□□□ -0.6
PABPC1-203ENST00000517921 HOXA2O43364 376 aa11.31□□□□□ -0.6
PABPC1-203ENST00000517921 AKR1B10O60218 316 aa11.31□□□□□ -0.6
PABPC1-203ENST00000517921 LCA5LO95447 670 aa11.31□□□□□ -0.6
PABPC1-203ENST00000517921 PFKMP08237 780 aa11.31□□□□□ -0.6
PABPC1-203ENST00000517921 CYP11B1P15538 503 aa11.31□□□□□ -0.6
PABPC1-203ENST00000517921 CD58P19256 250 aa11.31□□□□□ -0.6
PABPC1-203ENST00000517921 IGFBP6P24592 240 aaPredicted RBP11.31□□□□□ -0.6
PABPC1-203ENST00000517921 MSNP26038 577 aaKnown RBP11.31□□□□□ -0.6
PABPC1-203ENST00000517921 ANXA13P27216 316 aa11.31□□□□□ -0.6
PABPC1-203ENST00000517921 RPL9P32969 192 aaKnown RBP11.31□□□□□ -0.6
PABPC1-203ENST00000517921 GATMP50440 423 aa11.31□□□□□ -0.6
PABPC1-203ENST00000517921 CLCNKBP51801 687 aa11.31□□□□□ -0.6
PABPC1-203ENST00000517921 CDH8P55286 799 aa11.31□□□□□ -0.6
PABPC1-203ENST00000517921 LILRA4P59901 499 aa11.31□□□□□ -0.6
PABPC1-203ENST00000517921 DSC1Q08554 894 aa11.31□□□□□ -0.6
PABPC1-203ENST00000517921 INCA1Q0VD86 236 aa11.31□□□□□ -0.6
PABPC1-203ENST00000517921 IKBKEQ14164 716 aa11.31□□□□□ -0.6
PABPC1-203ENST00000517921 UPP1Q16831 310 aa11.31□□□□□ -0.6
PABPC1-203ENST00000517921 TMEM270Q6UE05 265 aa11.31□□□□□ -0.6
PABPC1-203ENST00000517921 NOP9Q86U38 636 aaKnown RBP11.31□□□□□ -0.6
PABPC1-203ENST00000517921 SLC47A2Q86VL8 602 aa11.31□□□□□ -0.6
PABPC1-203ENST00000517921 TDHQ8IZJ6 230 aa11.31□□□□□ -0.6
PABPC1-203ENST00000517921 CCAR2Q8N163 923 aaKnown RBP11.31□□□□□ -0.6
PABPC1-203ENST00000517921 TMEM199Q8N511 208 aa11.31□□□□□ -0.6
PABPC1-203ENST00000517921 C3orf58Q8NDZ4 430 aa11.31□□□□□ -0.6
PABPC1-203ENST00000517921 LNX1Q8TBB1 728 aaPredicted RBP11.31□□□□□ -0.6
PABPC1-203ENST00000517921 SLC20A1Q8WUM9 679 aa11.31□□□□□ -0.6
PABPC1-203ENST00000517921 CCDC42Q96M95 316 aa11.31□□□□□ -0.6
PABPC1-203ENST00000517921 CASD1Q96PB1 797 aa11.31□□□□□ -0.6
PABPC1-203ENST00000517921 EIF3CQ99613 913 aaKnown RBP11.31□□□□□ -0.6
PABPC1-203ENST00000517921 PAAF1Q9BRP4 392 aa11.31□□□□□ -0.6
PABPC1-203ENST00000517921 FAM124BQ9H5Z6 455 aaPredicted RBP11.31□□□□□ -0.6
PABPC1-203ENST00000517921 ACP6Q9NPH0 428 aa11.31□□□□□ -0.6
PABPC1-203ENST00000517921 KCND1Q9NSA2 647 aa11.31□□□□□ -0.6
PABPC1-203ENST00000517921 TBC1D13Q9NVG8 400 aa11.31□□□□□ -0.6
PABPC1-203ENST00000517921 GDAP2Q9NXN4 497 aa11.31□□□□□ -0.6
PABPC1-203ENST00000517921 HMGXB4Q9UGU5 601 aa11.31□□□□□ -0.6
PABPC1-203ENST00000517921 LRFN2Q9ULH4 789 aa11.31□□□□□ -0.6
PABPC1-203ENST00000517921 NENFQ9UMX5 172 aa11.31□□□□□ -0.6
PABPC1-203ENST00000517921 PPP2R2CQ9Y2T4 447 aa11.31□□□□□ -0.6
PABPC1-203ENST00000517921 SNX9Q9Y5X1 595 aa11.31□□□□□ -0.6
PABPC1-203ENST00000517921 PLXNA4Q9HCM2 1894 aa11.31□□□□□ -0.6
PABPC1-203ENST00000517921 LAMA2P24043 3122 aaKnown RBP11.31□□□□□ -0.6
PABPC1-203ENST00000517921 A0A087X0T9 212 aa11.3□□□□□ -0.6
PABPC1-203ENST00000517921 ABHD14A-ACY1A0A1B0GW23 586 aa11.3□□□□□ -0.6
PABPC1-203ENST00000517921 USP27XA6NNY8 438 aa11.3□□□□□ -0.6
PABPC1-203ENST00000517921 KPNA7A9QM74 516 aa11.3□□□□□ -0.6
PABPC1-203ENST00000517921 DDX3XO00571 662 aaKnown RBP eCLIP11.3□□□□□ -0.6
PABPC1-203ENST00000517921 CILPO75339 1184 aa11.3□□□□□ -0.6
PABPC1-203ENST00000517921 CALCAP01258 141 aa11.3□□□□□ -0.6
PABPC1-203ENST00000517921 FAM228BP0C875 321 aa11.3□□□□□ -0.6
PABPC1-203ENST00000517921 CHRNB2P17787 502 aa11.3□□□□□ -0.6
PABPC1-203ENST00000517921 AARSP49588 968 aaKnown RBP eCLIP11.3□□□□□ -0.6
PABPC1-203ENST00000517921 PDE6CP51160 858 aa11.3□□□□□ -0.6
PABPC1-203ENST00000517921 GFPT1Q06210 699 aaPredicted RBP11.3□□□□□ -0.6
PABPC1-203ENST00000517921 BMS1Q14692 1282 aaKnown RBP11.3□□□□□ -0.6
PABPC1-203ENST00000517921 SLC18A3Q16572 532 aa11.3□□□□□ -0.6
PABPC1-203ENST00000517921 CD300LGQ6UXG3 332 aa11.3□□□□□ -0.6
PABPC1-203ENST00000517921 LIMS2Q7Z4I7 341 aa11.3□□□□□ -0.6
PABPC1-203ENST00000517921 RPUSD2Q8IZ73 545 aaKnown RBP11.3□□□□□ -0.6
PABPC1-203ENST00000517921 WHAMMQ8TF30 809 aa11.3□□□□□ -0.6
PABPC1-203ENST00000517921 DDX1Q92499 740 aaKnown RBP11.3□□□□□ -0.6
PABPC1-203ENST00000517921 UROC1Q96N76 676 aa11.3□□□□□ -0.6
PABPC1-203ENST00000517921 AGPAT1Q99943 283 aa11.3□□□□□ -0.6
PABPC1-203ENST00000517921 MRPL45Q9BRJ2 306 aaKnown RBP11.3□□□□□ -0.6
PABPC1-203ENST00000517921 ELOVL4Q9GZR5 314 aa11.3□□□□□ -0.6
PABPC1-203ENST00000517921 IL23AQ9NPF7 189 aa11.3□□□□□ -0.6
PABPC1-203ENST00000517921 KANSL3Q9P2N6 904 aa11.3□□□□□ -0.6
PABPC1-203ENST00000517921 NME7Q9Y5B8 376 aa11.3□□□□□ -0.6
PABPC1-203ENST00000517921 ZNF638Q14966 1978 aaKnown RBP11.3□□□□□ -0.6
PABPC1-203ENST00000517921 MYO16Q9Y6X6 1858 aa11.29□□□□□ -0.6
PABPC1-203ENST00000517921 GREB1Q4ZG55 1949 aa11.29□□□□□ -0.6
PABPC1-203ENST00000517921 A0A0U1RQJ8 604 aa11.29□□□□□ -0.6
PABPC1-203ENST00000517921 EFCAB14O75071 495 aa11.29□□□□□ -0.6
PABPC1-203ENST00000517921 DDHD2O94830 711 aa11.29□□□□□ -0.6
PABPC1-203ENST00000517921 CCDC175P0C221 793 aa11.29□□□□□ -0.6
PABPC1-203ENST00000517921 ACRP10323 421 aa11.29□□□□□ -0.6
PABPC1-203ENST00000517921 GNA15P30679 374 aa11.29□□□□□ -0.6
PABPC1-203ENST00000517921 RAD23BP54727 409 aa11.29□□□□□ -0.6
PABPC1-203ENST00000517921 BPIFB4P59827 614 aa11.29□□□□□ -0.6
PABPC1-203ENST00000517921 WDR5P61964 334 aaKnown RBP11.29□□□□□ -0.6
PABPC1-203ENST00000517921 DEFB103AP81534 67 aa11.29□□□□□ -0.6
PABPC1-203ENST00000517921 FMO1Q01740 532 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms