RNA–Protein interactions for RNA: ENST00000517691.1

SKP1-204, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 2,033 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-204ENST00000517691 KRT40Q6A162 431 aa3.06□□□□□ -1.92
SKP1-204ENST00000517691 GALNT17Q6IS24 598 aa3.06□□□□□ -1.92
SKP1-204ENST00000517691 FAM117BQ6P1L5 589 aa3.06□□□□□ -1.92
SKP1-204ENST00000517691 KCNV1Q6PIU1 500 aa3.06□□□□□ -1.92
SKP1-204ENST00000517691 PIK3AP1Q6ZUJ8 805 aa3.06□□□□□ -1.92
SKP1-204ENST00000517691 RSRC2Q7L4I2 434 aaKnown RBP3.06□□□□□ -1.92
SKP1-204ENST00000517691 NLRC3Q7RTR2 1065 aa3.06□□□□□ -1.92
SKP1-204ENST00000517691 SNX32Q86XE0 403 aa3.06□□□□□ -1.92
SKP1-204ENST00000517691 SPATS2Q86XZ4 545 aaKnown RBP3.06□□□□□ -1.92
SKP1-204ENST00000517691 WFDC8Q8IUA0 241 aa3.06□□□□□ -1.92
SKP1-204ENST00000517691 CBARPQ8N350 705 aaPredicted RBP3.06□□□□□ -1.92
SKP1-204ENST00000517691 KLHL23Q8NBE8 558 aa3.06□□□□□ -1.92
SKP1-204ENST00000517691 CYP2W1Q8TAV3 490 aa3.06□□□□□ -1.92
SKP1-204ENST00000517691 TBCKQ8TEA7 893 aa3.06□□□□□ -1.92
SKP1-204ENST00000517691 KLHL6Q8WZ60 621 aa3.06□□□□□ -1.92
SKP1-204ENST00000517691 ZNF669Q96BR6 464 aaPredicted RBP3.06□□□□□ -1.92
SKP1-204ENST00000517691 ACSF2Q96CM8 615 aaPredicted RBP3.06□□□□□ -1.92
SKP1-204ENST00000517691 SHISA4Q96DD7 197 aa3.06□□□□□ -1.92
SKP1-204ENST00000517691 CDHR1Q96JP9 859 aa3.06□□□□□ -1.92
SKP1-204ENST00000517691 TNIP3Q96KP6 325 aa3.06□□□□□ -1.92
SKP1-204ENST00000517691 SPATA33Q96N06 139 aa3.06□□□□□ -1.92
SKP1-204ENST00000517691 ANO3Q9BYT9 981 aa3.06□□□□□ -1.92
SKP1-204ENST00000517691 KATNBL1Q9H079 304 aa3.06□□□□□ -1.92
SKP1-204ENST00000517691 PRDM6Q9NQX0 595 aa3.06□□□□□ -1.92
SKP1-204ENST00000517691 MAN1C1Q9NR34 630 aa3.06□□□□□ -1.92
SKP1-204ENST00000517691 MRGBPQ9NV56 204 aa3.06□□□□□ -1.92
SKP1-204ENST00000517691 PCDHB10Q9UN67 800 aa3.06□□□□□ -1.92
SKP1-204ENST00000517691 HIF3AQ9Y2N7 669 aa3.06□□□□□ -1.92
SKP1-204ENST00000517691 KIF3AQ9Y496 699 aa3.06□□□□□ -1.92
SKP1-204ENST00000517691 STK36Q9NRP7 1315 aa3.06□□□□□ -1.92
SKP1-204ENST00000517691 SYNRGQ9UMZ2 1314 aa3.06□□□□□ -1.92
SKP1-204ENST00000517691 RLFQ13129 1914 aa3.06□□□□□ -1.92
SKP1-204ENST00000517691 MYADML2A6NDP7 307 aa3.05□□□□□ -1.92
SKP1-204ENST00000517691 A6NNZ2 444 aa3.05□□□□□ -1.92
SKP1-204ENST00000517691 DDX39AO00148 427 aaKnown RBP3.05□□□□□ -1.92
SKP1-204ENST00000517691 DNM1LO00429 736 aa3.05□□□□□ -1.92
SKP1-204ENST00000517691 EIF4EBP3O60516 100 aaPredicted RBP3.05□□□□□ -1.92
SKP1-204ENST00000517691 CCNT1O60563 726 aaKnown RBP3.05□□□□□ -1.92
SKP1-204ENST00000517691 DNAJC8O75937 253 aaPredicted RBP3.05□□□□□ -1.92
SKP1-204ENST00000517691 MMP1P03956 469 aa3.05□□□□□ -1.92
SKP1-204ENST00000517691 ASGR1P07306 291 aa3.05□□□□□ -1.92
SKP1-204ENST00000517691 ASGR2P07307 311 aa3.05□□□□□ -1.92
SKP1-204ENST00000517691 ARP10275 920 aa3.05□□□□□ -1.92
SKP1-204ENST00000517691 CAPN2P17655 700 aa3.05□□□□□ -1.92
SKP1-204ENST00000517691 LPOP22079 712 aaPredicted RBP3.05□□□□□ -1.92
SKP1-204ENST00000517691 UBA1P22314 1058 aaKnown RBP3.05□□□□□ -1.92
SKP1-204ENST00000517691 ATICP31939 592 aa3.05□□□□□ -1.92
SKP1-204ENST00000517691 NTF4P34130 210 aa3.05□□□□□ -1.92
SKP1-204ENST00000517691 DDIT3P35638 169 aa3.05□□□□□ -1.92
SKP1-204ENST00000517691 SREBF1P36956 1147 aa3.05□□□□□ -1.92
SKP1-204ENST00000517691 STT3AP46977 705 aa3.05□□□□□ -1.92
SKP1-204ENST00000517691 RXRGP48443 463 aa3.05□□□□□ -1.92
SKP1-204ENST00000517691 USP11P51784 963 aa3.05□□□□□ -1.92
SKP1-204ENST00000517691 ACLYP53396 1101 aa3.05□□□□□ -1.92
SKP1-204ENST00000517691 PSMC6P62333 389 aa3.05□□□□□ -1.92
SKP1-204ENST00000517691 SP2Q02086 613 aa3.05□□□□□ -1.92
SKP1-204ENST00000517691 APBA1Q02410 837 aa3.05□□□□□ -1.92
SKP1-204ENST00000517691 ADCY1Q08828 1119 aa3.05□□□□□ -1.92
SKP1-204ENST00000517691 WASHC5Q12768 1159 aa3.05□□□□□ -1.92
SKP1-204ENST00000517691 NEDD9Q14511 834 aa3.05□□□□□ -1.92
SKP1-204ENST00000517691 ZNF460Q14592 562 aa3.05□□□□□ -1.92
SKP1-204ENST00000517691 KRT72Q14CN4 511 aa3.05□□□□□ -1.92
SKP1-204ENST00000517691 DGKDQ16760 1214 aa3.05□□□□□ -1.92
SKP1-204ENST00000517691 INF2Q27J81 1249 aa3.05□□□□□ -1.92
SKP1-204ENST00000517691 LETM2Q2VYF4 491 aa3.05□□□□□ -1.92
SKP1-204ENST00000517691 FNDC3BQ53EP0 1204 aaKnown RBP3.05□□□□□ -1.92
SKP1-204ENST00000517691 CEP55Q53EZ4 464 aa3.05□□□□□ -1.92
SKP1-204ENST00000517691 CELF3Q5SZQ8 465 aaKnown RBP3.05□□□□□ -1.92
SKP1-204ENST00000517691 UTP14CQ5TAP6 766 aaKnown RBP3.05□□□□□ -1.92
SKP1-204ENST00000517691 MZT2BQ6NZ67 158 aa3.05□□□□□ -1.92
SKP1-204ENST00000517691 CCDC62Q6P9F0 684 aa3.05□□□□□ -1.92
SKP1-204ENST00000517691 VHLLQ6RSH7 139 aa3.05□□□□□ -1.92
SKP1-204ENST00000517691 CXCL17Q6UXB2 119 aa3.05□□□□□ -1.92
SKP1-204ENST00000517691 PLA2G4DQ86XP0 818 aa3.05□□□□□ -1.92
SKP1-204ENST00000517691 SLC41A1Q8IVJ1 513 aa3.05□□□□□ -1.92
SKP1-204ENST00000517691 DMRTC2Q8IXT2 367 aaPredicted RBP3.05□□□□□ -1.92
SKP1-204ENST00000517691 DIS3L2Q8IYB7 885 aaKnown RBP3.05□□□□□ -1.92
SKP1-204ENST00000517691 PCSK9Q8NBP7 692 aaKnown RBP3.05□□□□□ -1.92
SKP1-204ENST00000517691 DAGLBQ8NCG7 672 aa3.05□□□□□ -1.92
SKP1-204ENST00000517691 GIMAP8Q8ND71 665 aaPredicted RBP3.05□□□□□ -1.92
SKP1-204ENST00000517691 AFG1LQ8WV93 481 aa3.05□□□□□ -1.92
SKP1-204ENST00000517691 GOLGA1Q92805 767 aa3.05□□□□□ -1.92
SKP1-204ENST00000517691 ELMO3Q96BJ8 720 aa3.05□□□□□ -1.92
SKP1-204ENST00000517691 GLT1D1Q96MS3 346 aa3.05□□□□□ -1.92
SKP1-204ENST00000517691 INPP4AQ96PE3 977 aaPredicted RBP3.05□□□□□ -1.92
SKP1-204ENST00000517691 MXRA8Q9BRK3 442 aa3.05□□□□□ -1.92
SKP1-204ENST00000517691 SDF4Q9BRK5 362 aa3.05□□□□□ -1.92
SKP1-204ENST00000517691 ZNF577Q9BSK1 485 aa3.05□□□□□ -1.92
SKP1-204ENST00000517691 HTATIP2Q9BUP3 242 aa3.05□□□□□ -1.92
SKP1-204ENST00000517691 WNT10AQ9GZT5 417 aa3.05□□□□□ -1.92
SKP1-204ENST00000517691 BCAS3Q9H6U6 928 aa3.05□□□□□ -1.92
SKP1-204ENST00000517691 ALG13Q9NP73 1137 aaKnown RBP3.05□□□□□ -1.92
SKP1-204ENST00000517691 STARD7Q9NQZ5 370 aa3.05□□□□□ -1.92
SKP1-204ENST00000517691 KCNH7Q9NS40 1196 aa3.05□□□□□ -1.92
SKP1-204ENST00000517691 RRN3Q9NYV6 651 aa3.05□□□□□ -1.92
SKP1-204ENST00000517691 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.05□□□□□ -1.92
SKP1-204ENST00000517691 ADAM30Q9UKF2 790 aa3.05□□□□□ -1.92
SKP1-204ENST00000517691 ATP11BQ9Y2G3 1177 aa3.05□□□□□ -1.92
SKP1-204ENST00000517691 Q9Y3F1 56 aa3.05□□□□□ -1.92
SKP1-204ENST00000517691 UBIAD1Q9Y5Z9 338 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms