RNA–Protein interactions for RNA: ENST00000516816.1

RNU1-40P-201, Transcript of RNA, U1 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU1-40P, Length 164 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-40P-201ENST00000516816 MCF2LO15068 1137 aa2.17□□□□□ -2.06
RNU1-40P-201ENST00000516816 EPHB6O15197 1021 aa2.17□□□□□ -2.06
RNU1-40P-201ENST00000516816 FANCGO15287 622 aa2.17□□□□□ -2.06
RNU1-40P-201ENST00000516816 ALOX15BO15296 676 aa2.17□□□□□ -2.06
RNU1-40P-201ENST00000516816 SLC16A4O15374 487 aa2.17□□□□□ -2.06
RNU1-40P-201ENST00000516816 NVLO15381 856 aaKnown RBP2.17□□□□□ -2.06
RNU1-40P-201ENST00000516816 MAGEB2O15479 319 aa2.17□□□□□ -2.06
RNU1-40P-201ENST00000516816 DDX3YO15523 660 aaKnown RBP2.17□□□□□ -2.06
RNU1-40P-201ENST00000516816 CLDN3O15551 220 aa2.17□□□□□ -2.06
RNU1-40P-201ENST00000516816 PRPF4O43172 522 aaKnown RBP eCLIP2.17□□□□□ -2.06
RNU1-40P-201ENST00000516816 TGFB1I1O43294 461 aa2.17□□□□□ -2.06
RNU1-40P-201ENST00000516816 ATMINO43313 823 aaPredicted RBP2.17□□□□□ -2.06
RNU1-40P-201ENST00000516816 STRNO43815 780 aa2.17□□□□□ -2.06
RNU1-40P-201ENST00000516816 AHCYL1O43865 530 aa2.17□□□□□ -2.06
RNU1-40P-201ENST00000516816 GAS2O43903 313 aaKnown RBP2.17□□□□□ -2.06
RNU1-40P-201ENST00000516816 SH3BP5O60239 455 aa2.17□□□□□ -2.06
RNU1-40P-201ENST00000516816 LRRN2O75325 713 aa2.17□□□□□ -2.06
RNU1-40P-201ENST00000516816 PSMD10O75832 226 aa2.17□□□□□ -2.06
RNU1-40P-201ENST00000516816 PROSCO94903 275 aa2.17□□□□□ -2.06
RNU1-40P-201ENST00000516816 HAUS5O94927 633 aa2.17□□□□□ -2.06
RNU1-40P-201ENST00000516816 UNC5CO95185 931 aa2.17□□□□□ -2.06
RNU1-40P-201ENST00000516816 IL18RAPO95256 599 aa2.17□□□□□ -2.06
RNU1-40P-201ENST00000516816 GJB6O95452 261 aa2.17□□□□□ -2.06
RNU1-40P-201ENST00000516816 SGPL1O95470 568 aa2.17□□□□□ -2.06
RNU1-40P-201ENST00000516816 LSM8O95777 96 aaKnown RBP2.17□□□□□ -2.06
RNU1-40P-201ENST00000516816 IFNB1P01574 187 aa2.17□□□□□ -2.06
RNU1-40P-201ENST00000516816 ICAM1P05362 532 aa2.17□□□□□ -2.06
RNU1-40P-201ENST00000516816 ITGAVP06756 1048 aa2.17□□□□□ -2.06
RNU1-40P-201ENST00000516816 SNRPAP09012 282 aaKnown RBP2.17□□□□□ -2.06
RNU1-40P-201ENST00000516816 WEE2P0C1S8 567 aa2.17□□□□□ -2.06
RNU1-40P-201ENST00000516816 DLATP10515 647 aaKnown RBP2.17□□□□□ -2.06
RNU1-40P-201ENST00000516816 KRT3P12035 628 aa2.17□□□□□ -2.06
RNU1-40P-201ENST00000516816 MYL4P12829 197 aa2.17□□□□□ -2.06
RNU1-40P-201ENST00000516816 ALAS1P13196 640 aa2.17□□□□□ -2.06
RNU1-40P-201ENST00000516816 ITGA4P13612 1032 aa2.17□□□□□ -2.06
RNU1-40P-201ENST00000516816 ATF7P17544 494 aaPredicted RBP2.17□□□□□ -2.06
RNU1-40P-201ENST00000516816 KRT4P19013 534 aa2.17□□□□□ -2.06
RNU1-40P-201ENST00000516816 VCAM1P19320 739 aa2.17□□□□□ -2.06
RNU1-40P-201ENST00000516816 MX2P20592 715 aa2.17□□□□□ -2.06
RNU1-40P-201ENST00000516816 ATP6V1C1P21283 382 aa2.17□□□□□ -2.06
RNU1-40P-201ENST00000516816 IBSPP21815 317 aaPredicted RBP2.17□□□□□ -2.06
RNU1-40P-201ENST00000516816 GRK2P25098 689 aa2.17□□□□□ -2.06
RNU1-40P-201ENST00000516816 GNA15P30679 374 aa2.17□□□□□ -2.06
RNU1-40P-201ENST00000516816 HOXA13P31271 388 aaPredicted RBP2.17□□□□□ -2.06
RNU1-40P-201ENST00000516816 SHMT1P34896 483 aa2.17□□□□□ -2.06
RNU1-40P-201ENST00000516816 PGM1P36871 562 aa2.17□□□□□ -2.06
RNU1-40P-201ENST00000516816 STAT3P40763 770 aa2.17□□□□□ -2.06
RNU1-40P-201ENST00000516816 RFC5P40937 340 aa2.17□□□□□ -2.06
RNU1-40P-201ENST00000516816 HADHAP40939 763 aa2.17□□□□□ -2.06
RNU1-40P-201ENST00000516816 PIK3CAP42336 1068 aa2.17□□□□□ -2.06
RNU1-40P-201ENST00000516816 PTGIRP43119 386 aa2.17□□□□□ -2.06
RNU1-40P-201ENST00000516816 SLCO1A2P46721 670 aa2.17□□□□□ -2.06
RNU1-40P-201ENST00000516816 KCNJ1P48048 391 aa2.17□□□□□ -2.06
RNU1-40P-201ENST00000516816 CASP4P49662 377 aa2.17□□□□□ -2.06
RNU1-40P-201ENST00000516816 PEX5P50542 639 aa2.17□□□□□ -2.06
RNU1-40P-201ENST00000516816 CDK7P50613 346 aa2.17□□□□□ -2.06
RNU1-40P-201ENST00000516816 SCNN1DP51172 638 aa2.17□□□□□ -2.06
RNU1-40P-201ENST00000516816 ARSEP51690 589 aa2.17□□□□□ -2.06
RNU1-40P-201ENST00000516816 CLCN2P51788 898 aa2.17□□□□□ -2.06
RNU1-40P-201ENST00000516816 CCNG1P51959 295 aa2.17□□□□□ -2.06
RNU1-40P-201ENST00000516816 HK2P52789 917 aa2.17□□□□□ -2.06
RNU1-40P-201ENST00000516816 YARSP54577 528 aaKnown RBP2.17□□□□□ -2.06
RNU1-40P-201ENST00000516816 PRKAA2P54646 552 aa2.17□□□□□ -2.06
RNU1-40P-201ENST00000516816 RAD23BP54727 409 aa2.17□□□□□ -2.06
RNU1-40P-201ENST00000516816 RHBDL3P58872 404 aa2.17□□□□□ -2.06
RNU1-40P-201ENST00000516816 YWHAGP61981 247 aaKnown RBP eCLIP2.17□□□□□ -2.06
RNU1-40P-201ENST00000516816 PSMC6P62333 389 aa2.17□□□□□ -2.06
RNU1-40P-201ENST00000516816 ESRRGP62508 458 aa2.17□□□□□ -2.06
RNU1-40P-201ENST00000516816 IFI35P80217 286 aaPredicted RBP2.17□□□□□ -2.06
RNU1-40P-201ENST00000516816 XIAPP98170 497 aa2.17□□□□□ -2.06
RNU1-40P-201ENST00000516816 ZNF200P98182 395 aaPredicted RBP2.17□□□□□ -2.06
RNU1-40P-201ENST00000516816 PDE1BQ01064 536 aa2.17□□□□□ -2.06
RNU1-40P-201ENST00000516816 SATB1Q01826 763 aa2.17□□□□□ -2.06
RNU1-40P-201ENST00000516816 SLC34A1Q06495 639 aa2.17□□□□□ -2.06
RNU1-40P-201ENST00000516816 GABPAQ06546 454 aa2.17□□□□□ -2.06
RNU1-40P-201ENST00000516816 CDK18Q07002 472 aa2.17□□□□□ -2.06
RNU1-40P-201ENST00000516816 MYO1EQ12965 1108 aa2.17□□□□□ -2.06
RNU1-40P-201ENST00000516816 PDIA2Q13087 525 aaKnown RBP2.17□□□□□ -2.06
RNU1-40P-201ENST00000516816 GPS1Q13098 491 aa2.17□□□□□ -2.06
RNU1-40P-201ENST00000516816 GRM1Q13255 1194 aa2.17□□□□□ -2.06
RNU1-40P-201ENST00000516816 ZNF211Q13398 564 aaPredicted RBP2.17□□□□□ -2.06
RNU1-40P-201ENST00000516816 MED21Q13503 144 aa2.17□□□□□ -2.06
RNU1-40P-201ENST00000516816 KRT81Q14533 505 aa2.17□□□□□ -2.06
RNU1-40P-201ENST00000516816 MXD4Q14582 209 aaPredicted RBP2.17□□□□□ -2.06
RNU1-40P-201ENST00000516816 RRP1BQ14684 758 aaKnown RBP2.17□□□□□ -2.06
RNU1-40P-201ENST00000516816 LBRQ14739 615 aaKnown RBP2.17□□□□□ -2.06
RNU1-40P-201ENST00000516816 NFIXQ14938 502 aa2.17□□□□□ -2.06
RNU1-40P-201ENST00000516816 KRT72Q14CN4 511 aa2.17□□□□□ -2.06
RNU1-40P-201ENST00000516816 PDK2Q15119 407 aa2.17□□□□□ -2.06
RNU1-40P-201ENST00000516816 TMED2Q15363 201 aa2.17□□□□□ -2.06
RNU1-40P-201ENST00000516816 STXBP2Q15833 593 aa2.17□□□□□ -2.06
RNU1-40P-201ENST00000516816 UAP1Q16222 522 aaPredicted RBP2.17□□□□□ -2.06
RNU1-40P-201ENST00000516816 DBN1Q16643 649 aa2.17□□□□□ -2.06
RNU1-40P-201ENST00000516816 PDK4Q16654 411 aa2.17□□□□□ -2.06
RNU1-40P-201ENST00000516816 HIF1AQ16665 826 aa2.17□□□□□ -2.06
RNU1-40P-201ENST00000516816 GSTA3Q16772 222 aa2.17□□□□□ -2.06
RNU1-40P-201ENST00000516816 LONRF1Q17RB8 773 aa2.17□□□□□ -2.06
RNU1-40P-201ENST00000516816 FAM98CQ17RN3 349 aaKnown RBP2.17□□□□□ -2.06
RNU1-40P-201ENST00000516816 CLEC16AQ2KHT3 1053 aa2.17□□□□□ -2.06
RNU1-40P-201ENST00000516816 P3H1Q32P28 736 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms