RNA–Protein interactions for RNA: ENST00000516600.1

SCARNA21.2-201, small Cajal body-specific RNA 21, humanhuman

BASIC

Gene SCARNA21, Length 166 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA21.2-201ENST00000516600 TWF1Q12792 350 aa6.32□□□□□ -1.4
SCARNA21.2-201ENST00000516600 GRIK3Q13003 919 aa6.32□□□□□ -1.4
SCARNA21.2-201ENST00000516600 HLA-BQ31612 363 aa6.32□□□□□ -1.4
SCARNA21.2-201ENST00000516600 INAVAQ3KP66 663 aa6.32□□□□□ -1.4
SCARNA21.2-201ENST00000516600 LINC00303Q3SY05 128 aa6.32□□□□□ -1.4
SCARNA21.2-201ENST00000516600 WDR45BQ5MNZ6 344 aa6.32□□□□□ -1.4
SCARNA21.2-201ENST00000516600 STXBP5Q5T5C0 1151 aa6.32□□□□□ -1.4
SCARNA21.2-201ENST00000516600 TRIM68Q6AZZ1 485 aa6.32□□□□□ -1.4
SCARNA21.2-201ENST00000516600 TMEM92Q6UXU6 159 aa6.32□□□□□ -1.4
SCARNA21.2-201ENST00000516600 ZNF410Q86VK4 478 aa6.32□□□□□ -1.4
SCARNA21.2-201ENST00000516600 POTEDQ86YR6 584 aa6.32□□□□□ -1.4
SCARNA21.2-201ENST00000516600 TCEAL8Q8IYN2 117 aa6.32□□□□□ -1.4
SCARNA21.2-201ENST00000516600 HACE1Q8IYU2 909 aa6.32□□□□□ -1.4
SCARNA21.2-201ENST00000516600 STAG2Q8N3U4 1231 aa6.32□□□□□ -1.4
SCARNA21.2-201ENST00000516600 SMG8Q8ND04 991 aaKnown RBP6.32□□□□□ -1.4
SCARNA21.2-201ENST00000516600 FAM167AQ96KS9 214 aa6.32□□□□□ -1.4
SCARNA21.2-201ENST00000516600 PIGSQ96S52 555 aa6.32□□□□□ -1.4
SCARNA21.2-201ENST00000516600 SEC62Q99442 399 aaKnown RBP6.32□□□□□ -1.4
SCARNA21.2-201ENST00000516600 SEMA3CQ99985 751 aa6.32□□□□□ -1.4
SCARNA21.2-201ENST00000516600 FAM83CQ9BQN1 747 aa6.32□□□□□ -1.4
SCARNA21.2-201ENST00000516600 POLR3CQ9BUI4 534 aaPredicted RBP6.32□□□□□ -1.4
SCARNA21.2-201ENST00000516600 CEP72Q9P209 647 aa6.32□□□□□ -1.4
SCARNA21.2-201ENST00000516600 CACNG4Q9UBN1 327 aa6.32□□□□□ -1.4
SCARNA21.2-201ENST00000516600 DKK3Q9UBP4 350 aa6.32□□□□□ -1.4
SCARNA21.2-201ENST00000516600 TCEAL9Q9UHQ7 104 aa6.32□□□□□ -1.4
SCARNA21.2-201ENST00000516600 IPPQ9Y573 584 aa6.32□□□□□ -1.4
SCARNA21.2-201ENST00000516600 BACE2Q9Y5Z0 518 aa6.32□□□□□ -1.4
SCARNA21.2-201ENST00000516600 MYLKQ15746 1914 aa6.32□□□□□ -1.4
SCARNA21.2-201ENST00000516600 NUP210Q8TEM1 1887 aaPredicted RBP6.32□□□□□ -1.4
SCARNA21.2-201ENST00000516600 MYH9P35579 1960 aaKnown RBP6.31□□□□□ -1.4
SCARNA21.2-201ENST00000516600 KNL1Q8NG31 2342 aa6.31□□□□□ -1.4
SCARNA21.2-201ENST00000516600 PNMA6FA0A0J9YX94 578 aa6.31□□□□□ -1.4
SCARNA21.2-201ENST00000516600 A0A1B0GTW7 788 aa6.31□□□□□ -1.4
SCARNA21.2-201ENST00000516600 TCRBV21S2A2A0A5A6 115 aa6.31□□□□□ -1.4
SCARNA21.2-201ENST00000516600 CASTOR2A6NHX0 329 aa6.31□□□□□ -1.4
SCARNA21.2-201ENST00000516600 PIK3CDO00329 1044 aa6.31□□□□□ -1.4
SCARNA21.2-201ENST00000516600 PRAMEF12O95522 483 aa6.31□□□□□ -1.4
SCARNA21.2-201ENST00000516600 C1SP09871 688 aa6.31□□□□□ -1.4
SCARNA21.2-201ENST00000516600 TRIM27P14373 513 aa6.31□□□□□ -1.4
SCARNA21.2-201ENST00000516600 HNRNPLP14866 589 aaKnown RBP eCLIP6.31□□□□□ -1.4
SCARNA21.2-201ENST00000516600 ATF2P15336 505 aa6.31□□□□□ -1.4
SCARNA21.2-201ENST00000516600 GLDCP23378 1020 aa6.31□□□□□ -1.4
SCARNA21.2-201ENST00000516600 GJA4P35212 333 aa6.31□□□□□ -1.4
SCARNA21.2-201ENST00000516600 DNM2P50570 870 aa6.31□□□□□ -1.4
SCARNA21.2-201ENST00000516600 USP11P51784 963 aa6.31□□□□□ -1.4
SCARNA21.2-201ENST00000516600 OXCT1P55809 520 aa6.31□□□□□ -1.4
SCARNA21.2-201ENST00000516600 ARPP19P56211 112 aa6.31□□□□□ -1.4
SCARNA21.2-201ENST00000516600 ITGB3BPQ13352 177 aaPredicted RBP6.31□□□□□ -1.4
SCARNA21.2-201ENST00000516600 SF3A1Q15459 793 aaKnown RBP6.31□□□□□ -1.4
SCARNA21.2-201ENST00000516600 SKIDA1Q1XH10 827 aa6.31□□□□□ -1.4
SCARNA21.2-201ENST00000516600 ARHGAP15Q53QZ3 475 aa6.31□□□□□ -1.4
SCARNA21.2-201ENST00000516600 CCDC178Q5BJE1 867 aa6.31□□□□□ -1.4
SCARNA21.2-201ENST00000516600 UBXN11Q5T124 520 aa6.31□□□□□ -1.4
SCARNA21.2-201ENST00000516600 GPR158Q5T848 1215 aa6.31□□□□□ -1.4
SCARNA21.2-201ENST00000516600 ANKS3Q6ZW76 656 aa6.31□□□□□ -1.4
SCARNA21.2-201ENST00000516600 IQCA1Q86XH1 822 aa6.31□□□□□ -1.4
SCARNA21.2-201ENST00000516600 RHPN2Q8IUC4 686 aa6.31□□□□□ -1.4
SCARNA21.2-201ENST00000516600 LSMEM2Q8N112 164 aa6.31□□□□□ -1.4
SCARNA21.2-201ENST00000516600 CPA6Q8N4T0 437 aa6.31□□□□□ -1.4
SCARNA21.2-201ENST00000516600 ZCCHC9Q8N567 271 aaKnown RBP6.31□□□□□ -1.4
SCARNA21.2-201ENST00000516600 OXER1Q8TDS5 423 aa6.31□□□□□ -1.4
SCARNA21.2-201ENST00000516600 EXTL1Q92935 676 aa6.31□□□□□ -1.4
SCARNA21.2-201ENST00000516600 NLRP4Q96MN2 994 aa6.31□□□□□ -1.4
SCARNA21.2-201ENST00000516600 PAAF1Q9BRP4 392 aa6.31□□□□□ -1.4
SCARNA21.2-201ENST00000516600 ECHDC1Q9NTX5 307 aa6.31□□□□□ -1.4
SCARNA21.2-201ENST00000516600 TBX20Q9UMR3 447 aa6.31□□□□□ -1.4
SCARNA21.2-201ENST00000516600 GIT1Q9Y2X7 761 aa6.31□□□□□ -1.4
SCARNA21.2-201ENST00000516600 HES2Q9Y543 173 aa6.31□□□□□ -1.4
SCARNA21.2-201ENST00000516600 WNT6Q9Y6F9 365 aa6.31□□□□□ -1.4
SCARNA21.2-201ENST00000516600 RP1L1Q8IWN7 2480 aaPredicted RBP6.31□□□□□ -1.4
SCARNA21.2-201ENST00000516600 NIPBLQ6KC79 2804 aaeCLIP6.31□□□□□ -1.4
SCARNA21.2-201ENST00000516600 NBEAL1Q6ZS30 2694 aa6.3□□□□□ -1.4
SCARNA21.2-201ENST00000516600 SPDYE3A6NKU9 549 aa6.3□□□□□ -1.4
SCARNA21.2-201ENST00000516600 MEI4A8MW99 385 aa6.3□□□□□ -1.4
SCARNA21.2-201ENST00000516600 MEIS2O14770 477 aa6.3□□□□□ -1.4
SCARNA21.2-201ENST00000516600 IPO8O15397 1037 aaKnown RBP6.3□□□□□ -1.4
SCARNA21.2-201ENST00000516600 NDUFS2O75306 463 aa6.3□□□□□ -1.4
SCARNA21.2-201ENST00000516600 RECQL4O94761 1208 aa6.3□□□□□ -1.4
SCARNA21.2-201ENST00000516600 ABLIM3O94929 683 aa6.3□□□□□ -1.4
SCARNA21.2-201ENST00000516600 SEC24AO95486 1093 aa6.3□□□□□ -1.4
SCARNA21.2-201ENST00000516600 ARSAP15289 507 aa6.3□□□□□ -1.4
SCARNA21.2-201ENST00000516600 FGFR3P22607 806 aa6.3□□□□□ -1.4
SCARNA21.2-201ENST00000516600 MAOBP27338 520 aa6.3□□□□□ -1.4
SCARNA21.2-201ENST00000516600 COL8A1P27658 744 aa6.3□□□□□ -1.4
SCARNA21.2-201ENST00000516600 FOSBP53539 338 aa6.3□□□□□ -1.4
SCARNA21.2-201ENST00000516600 ERVPABLB-1P60509 514 aa6.3□□□□□ -1.4
SCARNA21.2-201ENST00000516600 CYP4A11Q02928 519 aa6.3□□□□□ -1.4
SCARNA21.2-201ENST00000516600 TUSC3Q13454 348 aa6.3□□□□□ -1.4
SCARNA21.2-201ENST00000516600 DRP2Q13474 957 aa6.3□□□□□ -1.4
SCARNA21.2-201ENST00000516600 CCDC184Q52MB2 194 aa6.3□□□□□ -1.4
SCARNA21.2-201ENST00000516600 SGO2Q562F6 1265 aa6.3□□□□□ -1.4
SCARNA21.2-201ENST00000516600 CC2D1AQ6P1N0 951 aaPredicted RBP6.3□□□□□ -1.4
SCARNA21.2-201ENST00000516600 FBXL19Q6PCT2 694 aa6.3□□□□□ -1.4
SCARNA21.2-201ENST00000516600 MFSD6Q6ZSS7 791 aa6.3□□□□□ -1.4
SCARNA21.2-201ENST00000516600 ATCAYQ86WG3 371 aa6.3□□□□□ -1.4
SCARNA21.2-201ENST00000516600 PTRH1Q86Y79 214 aaKnown RBP6.3□□□□□ -1.4
SCARNA21.2-201ENST00000516600 MMP21Q8N119 569 aa6.3□□□□□ -1.4
SCARNA21.2-201ENST00000516600 TXNDC5Q8NBS9 432 aaKnown RBP6.3□□□□□ -1.4
SCARNA21.2-201ENST00000516600 SSC4DQ8WTU2 575 aa6.3□□□□□ -1.4
SCARNA21.2-201ENST00000516600 ESR2Q92731 530 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms