RNA–Protein interactions for RNA: ENST00000516424.1

RN7SKP253-201, Transcript of RNA, 7SK small nuclear pseudogene 253, humanhuman

BASIC

Gene RN7SKP253, Length 309 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP253-201ENST00000516424 C22orf23Q9BZE7 217 aa6.87□□□□□ -1.31
RN7SKP253-201ENST00000516424 ENKD1Q9H0I2 346 aa6.87□□□□□ -1.31
RN7SKP253-201ENST00000516424 CCDC8Q9H0W5 538 aaPredicted RBP6.87□□□□□ -1.31
RN7SKP253-201ENST00000516424 GREM2Q9H772 168 aa6.87□□□□□ -1.31
RN7SKP253-201ENST00000516424 DBNLQ9UJU6 430 aaKnown RBP6.87□□□□□ -1.31
RN7SKP253-201ENST00000516424 SPO11Q9Y5K1 396 aa6.87□□□□□ -1.31
RN7SKP253-201ENST00000516424 AK9Q5TCS8 1911 aa6.87□□□□□ -1.31
RN7SKP253-201ENST00000516424 UBR3Q6ZT12 1888 aa6.87□□□□□ -1.31
RN7SKP253-201ENST00000516424 DDX60Q8IY21 1712 aaKnown RBP6.87□□□□□ -1.31
RN7SKP253-201ENST00000516424 ANKRD18BA2A2Z9 1011 aa6.86□□□□□ -1.31
RN7SKP253-201ENST00000516424 TRIM24O15164 1050 aa6.86□□□□□ -1.31
RN7SKP253-201ENST00000516424 RECQL4O94761 1208 aa6.86□□□□□ -1.31
RN7SKP253-201ENST00000516424 JMJD7P0C870 316 aa6.86□□□□□ -1.31
RN7SKP253-201ENST00000516424 HSP90B1P14625 803 aaKnown RBP6.86□□□□□ -1.31
RN7SKP253-201ENST00000516424 IL12RB1P42701 662 aa6.86□□□□□ -1.31
RN7SKP253-201ENST00000516424 TIMM10P62072 90 aa6.86□□□□□ -1.31
RN7SKP253-201ENST00000516424 SF3B3Q15393 1217 aaKnown RBP6.86□□□□□ -1.31
RN7SKP253-201ENST00000516424 TXNRD1Q16881 649 aa6.86□□□□□ -1.31
RN7SKP253-201ENST00000516424 TIGD2Q4W5G0 525 aa6.86□□□□□ -1.31
RN7SKP253-201ENST00000516424 PLEKHG4Q58EX7 1191 aa6.86□□□□□ -1.31
RN7SKP253-201ENST00000516424 VGLL2Q8N8G2 317 aa6.86□□□□□ -1.31
RN7SKP253-201ENST00000516424 PIK3C3Q8NEB9 887 aa6.86□□□□□ -1.31
RN7SKP253-201ENST00000516424 GPATCH3Q96I76 525 aa6.86□□□□□ -1.31
RN7SKP253-201ENST00000516424 HIST1H2AHQ96KK5 128 aa6.86□□□□□ -1.31
RN7SKP253-201ENST00000516424 HIST1H2AJQ99878 128 aa6.86□□□□□ -1.31
RN7SKP253-201ENST00000516424 RIOX1Q9H6W3 641 aa6.86□□□□□ -1.31
RN7SKP253-201ENST00000516424 UPF2Q9HAU5 1272 aaKnown RBP6.86□□□□□ -1.31
RN7SKP253-201ENST00000516424 TOMM22Q9NS69 142 aa6.86□□□□□ -1.31
RN7SKP253-201ENST00000516424 SRP68Q9UHB9 627 aaKnown RBP6.86□□□□□ -1.31
RN7SKP253-201ENST00000516424 COL4A3Q01955 1670 aa6.86□□□□□ -1.31
RN7SKP253-201ENST00000516424 SCN7AQ01118 1682 aa6.85□□□□□ -1.31
RN7SKP253-201ENST00000516424 AHRRA9YTQ3 701 aa6.85□□□□□ -1.31
RN7SKP253-201ENST00000516424 NRP1O14786 923 aa6.85□□□□□ -1.31
RN7SKP253-201ENST00000516424 MAFGO15525 162 aa6.85□□□□□ -1.31
RN7SKP253-201ENST00000516424 EPB41L2O43491 1005 aaKnown RBP6.85□□□□□ -1.31
RN7SKP253-201ENST00000516424 B3GALT2O43825 422 aa6.85□□□□□ -1.31
RN7SKP253-201ENST00000516424 PPFIA4O75335 1185 aa6.85□□□□□ -1.31
RN7SKP253-201ENST00000516424 ALDH1A2O94788 518 aa6.85□□□□□ -1.31
RN7SKP253-201ENST00000516424 GYPEP15421 78 aa6.85□□□□□ -1.31
RN7SKP253-201ENST00000516424 RFC4P35249 363 aa6.85□□□□□ -1.31
RN7SKP253-201ENST00000516424 HNRNPA0Q13151 305 aaKnown RBP6.85□□□□□ -1.31
RN7SKP253-201ENST00000516424 CCDC142Q17RM4 750 aa6.85□□□□□ -1.31
RN7SKP253-201ENST00000516424 CDCA2Q69YH5 1023 aaPredicted RBP6.85□□□□□ -1.31
RN7SKP253-201ENST00000516424 LDHAL6AQ6ZMR3 332 aa6.85□□□□□ -1.31
RN7SKP253-201ENST00000516424 TICAM2Q86XR7 235 aa6.85□□□□□ -1.31
RN7SKP253-201ENST00000516424 BEND2Q8NDZ0 799 aa6.85□□□□□ -1.31
RN7SKP253-201ENST00000516424 OR52N2Q8NGI0 321 aa6.85□□□□□ -1.31
RN7SKP253-201ENST00000516424 RILPL2Q969X0 211 aa6.85□□□□□ -1.31
RN7SKP253-201ENST00000516424 EVI5LQ96CN4 794 aa6.85□□□□□ -1.31
RN7SKP253-201ENST00000516424 FAM193BQ96PV7 902 aaPredicted RBP6.85□□□□□ -1.31
RN7SKP253-201ENST00000516424 EPC1Q9H2F5 836 aa6.85□□□□□ -1.31
RN7SKP253-201ENST00000516424 ZMAT4Q9H898 229 aa6.85□□□□□ -1.31
RN7SKP253-201ENST00000516424 OXSMQ9NWU1 459 aa6.85□□□□□ -1.31
RN7SKP253-201ENST00000516424 H2AFY2Q9P0M6 372 aaPredicted RBP6.85□□□□□ -1.31
RN7SKP253-201ENST00000516424 ZNHIT2Q9UHR6 403 aa6.85□□□□□ -1.31
RN7SKP253-201ENST00000516424 EIF2B4Q9UI10 523 aaKnown RBP6.85□□□□□ -1.31
RN7SKP253-201ENST00000516424 LAMB2P55268 1798 aa6.85□□□□□ -1.31
RN7SKP253-201ENST00000516424 C4AP0C0L4 1744 aa6.84□□□□□ -1.31
RN7SKP253-201ENST00000516424 COL24A1Q17RW2 1714 aa6.84□□□□□ -1.31
RN7SKP253-201ENST00000516424 A0A1B0GUL7 405 aa6.84□□□□□ -1.31
RN7SKP253-201ENST00000516424 REC8O95072 547 aa6.84□□□□□ -1.31
RN7SKP253-201ENST00000516424 PCDH8O95206 1070 aa6.84□□□□□ -1.31
RN7SKP253-201ENST00000516424 PDE8BO95263 885 aa6.84□□□□□ -1.31
RN7SKP253-201ENST00000516424 MAP4K4O95819 1239 aaPredicted RBP6.84□□□□□ -1.31
RN7SKP253-201ENST00000516424 TM4SF1P30408 202 aa6.84□□□□□ -1.31
RN7SKP253-201ENST00000516424 CASRP41180 1078 aa6.84□□□□□ -1.31
RN7SKP253-201ENST00000516424 FAM189BP81408 668 aa6.84□□□□□ -1.31
RN7SKP253-201ENST00000516424 CD69Q07108 199 aa6.84□□□□□ -1.31
RN7SKP253-201ENST00000516424 SQSTM1Q13501 440 aa6.84□□□□□ -1.31
RN7SKP253-201ENST00000516424 CCDC152Q4G0S7 254 aa6.84□□□□□ -1.31
RN7SKP253-201ENST00000516424 SOGA3Q5TF21 947 aa6.84□□□□□ -1.31
RN7SKP253-201ENST00000516424 HECTD2Q5U5R9 776 aa6.84□□□□□ -1.31
RN7SKP253-201ENST00000516424 CASC1Q6TDU7 716 aa6.84□□□□□ -1.31
RN7SKP253-201ENST00000516424 UBE2R2Q712K3 238 aaPredicted RBP6.84□□□□□ -1.31
RN7SKP253-201ENST00000516424 UNC5BQ8IZJ1 945 aa6.84□□□□□ -1.31
RN7SKP253-201ENST00000516424 CNTROBQ8N137 903 aa6.84□□□□□ -1.31
RN7SKP253-201ENST00000516424 PPP1R14CQ8TAE6 165 aa6.84□□□□□ -1.31
RN7SKP253-201ENST00000516424 IL17RAQ96F46 866 aa6.84□□□□□ -1.31
RN7SKP253-201ENST00000516424 NYXQ9GZU5 481 aa6.84□□□□□ -1.31
RN7SKP253-201ENST00000516424 KCNH6Q9H252 994 aa6.84□□□□□ -1.31
RN7SKP253-201ENST00000516424 IL25Q9H293 177 aa6.84□□□□□ -1.31
RN7SKP253-201ENST00000516424 BOLA2Q9H3K6 86 aa6.84□□□□□ -1.31
RN7SKP253-201ENST00000516424 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.84□□□□□ -1.31
RN7SKP253-201ENST00000516424 AKAP11Q9UKA4 1901 aa6.84□□□□□ -1.32
RN7SKP253-201ENST00000516424 TAF1P21675 1872 aa6.83□□□□□ -1.32
RN7SKP253-201ENST00000516424 CENPVL1A0A0U1RR11 272 aa6.83□□□□□ -1.32
RN7SKP253-201ENST00000516424 LPXNO60711 386 aa6.83□□□□□ -1.32
RN7SKP253-201ENST00000516424 DNAJC6O75061 913 aa6.83□□□□□ -1.32
RN7SKP253-201ENST00000516424 GYS1P13807 737 aa6.83□□□□□ -1.32
RN7SKP253-201ENST00000516424 LAG3P18627 525 aa6.83□□□□□ -1.32
RN7SKP253-201ENST00000516424 FGFR2P21802 821 aa6.83□□□□□ -1.32
RN7SKP253-201ENST00000516424 TAF7LQ5H9L4 462 aa6.83□□□□□ -1.32
RN7SKP253-201ENST00000516424 PRIMA1Q86XR5 153 aa6.83□□□□□ -1.32
RN7SKP253-201ENST00000516424 OR5M3Q8NGP4 307 aa6.83□□□□□ -1.32
RN7SKP253-201ENST00000516424 NTN5Q8WTR8 489 aaPredicted RBP6.83□□□□□ -1.32
RN7SKP253-201ENST00000516424 ZNF764Q96H86 408 aaPredicted RBP6.83□□□□□ -1.32
RN7SKP253-201ENST00000516424 NEUROD6Q96NK8 337 aa6.83□□□□□ -1.32
RN7SKP253-201ENST00000516424 PDCD2LQ9BRP1 358 aa6.83□□□□□ -1.32
RN7SKP253-201ENST00000516424 LSM14BQ9BX40 385 aaKnown RBP6.83□□□□□ -1.32
RN7SKP253-201ENST00000516424 TOR3AQ9H497 397 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms